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Sed0005019 (gene) of Chayote v1 genome

Gene IDSed0005019
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain-containing protein
Genome locationLG03:44880984..44881514
RNA-Seq ExpressionSed0005019
SyntenySed0005019
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029841.1 hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-4767.06Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MGGC+SRRSSSAVA AD IQ+VHL GHV+ FH+PITARQVT     PAEYF+ TAA LVS A  PAL+PDA+LQPGKVYF+LPFSTL P+VS +DL+SIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGG-GLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN
        R+L AAAKSA +     PCV  GGG G KA T  A+SRQW+P LDTI+E K VN    +SESDL  KHNN
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGG-GLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN

XP_008460258.1 PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo]2.8e-4870.55Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MGGCVS RSSS  A AD++QVVHL GHV+ FH+PITARQV  K   P EYF+CTAA LVSTA  PAL PDAVLQPGKVYF+LPFSTL P+VS ADLASIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL
        RRL AAAKSAAK+G   PC  A GG     TAA +SRQWRP+LDTIKE KP N+ + R ESDL
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL

XP_011650123.1 uncharacterized protein LOC105434722 [Cucumis sativus]2.0e-4667.68Show/hide
Query:  MGGCVSRRSSS-AVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASI
        MGGC+S RSSS A A AD++QVVHL GHV+ FH+PITARQV  +   PAEYF+CTAA LVSTA  PAL+PD VLQPGKVYF+LP STL P+VS ADLASI
Subjt:  MGGCVSRRSSS-AVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASI

Query:  ARRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL
        ARRL AAAKSAAK+G   PC  A GG     T A +SRQWRP+LDTI+E KP  NN  R +SDL
Subjt:  ARRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL

XP_022996489.1 uncharacterized protein LOC111491721 [Cucurbita maxima]2.2e-4564.5Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MG C+SRRSSSAVA AD IQ+VHL GHV+ FH+PITA QVT     PAEYF+ TAA LVS A  PAL+PDA+LQPGKVYF+LPFSTL P+VS +DL+SIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN
        R+L AAAKSA +     PCV  GGG       AA+SRQW+P LDTI+E K VN    +SESDL  KHNN
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN

XP_023547215.1 uncharacterized protein LOC111806092 [Cucurbita pepo subsp. pepo]1.7e-4566.27Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MGGC+SRRSSSAVA AD IQ+VHL GHV+ FH PITARQVT     PAEYF+ TAA LVS A  PAL+PDA+LQPGKVYF+LPFSTL P+VS +DL+SIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN
        R+L AAAKSA      RP  VA GGG   +T  A+SRQW+P LDTI+E K VN    +SESDL  KHNN
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN

TrEMBL top hitse value%identityAlignment
A0A0A0LHC0 Uncharacterized protein9.7e-4767.68Show/hide
Query:  MGGCVSRRSSS-AVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASI
        MGGC+S RSSS A A AD++QVVHL GHV+ FH+PITARQV  +   PAEYF+CTAA LVSTA  PAL+PD VLQPGKVYF+LP STL P+VS ADLASI
Subjt:  MGGCVSRRSSS-AVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASI

Query:  ARRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL
        ARRL AAAKSAAK+G   PC  A GG     T A +SRQWRP+LDTI+E KP  NN  R +SDL
Subjt:  ARRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL

A0A1S3CC70 uncharacterized protein LOC1034991341.4e-4870.55Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MGGCVS RSSS  A AD++QVVHL GHV+ FH+PITARQV  K   P EYF+CTAA LVSTA  PAL PDAVLQPGKVYF+LPFSTL P+VS ADLASIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL
        RRL AAAKSAAK+G   PC  A GG     TAA +SRQWRP+LDTIKE KP N+ + R ESDL
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL

A0A5D3CAJ8 DUF4228 domain-containing protein1.4e-4870.55Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MGGCVS RSSS  A AD++QVVHL GHV+ FH+PITARQV  K   P EYF+CTAA LVSTA  PAL PDAVLQPGKVYF+LPFSTL P+VS ADLASIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL
        RRL AAAKSAAK+G   PC  A GG     TAA +SRQWRP+LDTIKE KP N+ + R ESDL
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDL

A0A6J1K8V3 uncharacterized protein LOC1114917211.1e-4564.5Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MG C+SRRSSSAVA AD IQ+VHL GHV+ FH+PITA QVT     PAEYF+ TAA LVS A  PAL+PDA+LQPGKVYF+LPFSTL P+VS +DL+SIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN
        R+L AAAKSA +     PCV  GGG       AA+SRQW+P LDTI+E K VN    +SESDL  KHNN
Subjt:  RRLNAAAKSAAKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNN

W9QLQ9 Uncharacterized protein1.4e-2140.56Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA
        MG C+S RSSS+  +   ++VVHL G+V  F  P++   VT K   P +YFVCT A L+S  T+P + P+ +L+ GK+YF+LP+S L  +VS  DLASIA
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIA

Query:  RRLNAAAKSAAK-----TGQSRPCVVAGGGG-------LKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHN
        R+L A AK+  +      G+  P     GG         ++   A R R W+P+LDTI+E     +   RSES+L  + N
Subjt:  RRLNAAAKSAAK-----TGQSRPCVVAGGGG-------LKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein6.1e-0929.66Show/hide
Query:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHAL-------PAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVST
        MG CVS   +  V+ +   ++V + G +R +  P+ A QV E  +         + YF+C +  L      PA+  D +LQ  ++YF+LP S     +S 
Subjt:  MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHAL-------PAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVST

Query:  ADLASIARRLNAAAKSAA
        +D+A++A + + A + AA
Subjt:  ADLASIARRLNAAAKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCTGTGTCTCCCGCCGATCATCCTCCGCCGTCGCCGATGCCGATAAAATCCAAGTCGTCCATCTCAAAGGCCACGTCCGACTCTTCCACACCCCAATCACCGC
CCGCCAGGTTACCGAAAAGCATGCGCTGCCGGCCGAGTACTTCGTATGCACGGCAGCGATGCTGGTCTCCACGGCCACCCGCCCCGCGCTGAGCCCCGACGCCGTGCTGC
AGCCGGGAAAGGTCTATTTTATGCTACCTTTCTCCACTCTTCTCCCCGAGGTTTCTACAGCCGACTTGGCCTCCATAGCCAGAAGACTCAATGCCGCAGCCAAGTCCGCT
GCGAAGACTGGCCAGTCGCGGCCTTGTGTTGTGGCTGGCGGTGGCGGTTTGAAGGCGCAGACTGCGGCGGCGAGGTCGAGACAGTGGAGGCCGGTTTTGGACACGATTAA
GGAGATCAAGCCCGTGAATAATAACCAGCTGAGGAGCGAGTCGGATTTGCATGGGAAACATAATAACCCTTTGTCTGTATTTGAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCTGTGTCTCCCGCCGATCATCCTCCGCCGTCGCCGATGCCGATAAAATCCAAGTCGTCCATCTCAAAGGCCACGTCCGACTCTTCCACACCCCAATCACCGC
CCGCCAGGTTACCGAAAAGCATGCGCTGCCGGCCGAGTACTTCGTATGCACGGCAGCGATGCTGGTCTCCACGGCCACCCGCCCCGCGCTGAGCCCCGACGCCGTGCTGC
AGCCGGGAAAGGTCTATTTTATGCTACCTTTCTCCACTCTTCTCCCCGAGGTTTCTACAGCCGACTTGGCCTCCATAGCCAGAAGACTCAATGCCGCAGCCAAGTCCGCT
GCGAAGACTGGCCAGTCGCGGCCTTGTGTTGTGGCTGGCGGTGGCGGTTTGAAGGCGCAGACTGCGGCGGCGAGGTCGAGACAGTGGAGGCCGGTTTTGGACACGATTAA
GGAGATCAAGCCCGTGAATAATAACCAGCTGAGGAGCGAGTCGGATTTGCATGGGAAACATAATAACCCTTTGTCTGTATTTGAGAAATAA
Protein sequenceShow/hide protein sequence
MGGCVSRRSSSAVADADKIQVVHLKGHVRLFHTPITARQVTEKHALPAEYFVCTAAMLVSTATRPALSPDAVLQPGKVYFMLPFSTLLPEVSTADLASIARRLNAAAKSA
AKTGQSRPCVVAGGGGLKAQTAAARSRQWRPVLDTIKEIKPVNNNQLRSESDLHGKHNNPLSVFEK