; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005031 (gene) of Chayote v1 genome

Gene IDSed0005031
OrganismSechium edule (Chayote v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationLG07:42903550..42903944
RNA-Seq ExpressionSed0005031
SyntenySed0005031
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC32449.1 hypothetical protein L484_012616 [Morus notabilis]1.7e-1270.15Show/hide
Query:  LIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVA-SSSSKAVNVDKNLPAKDGK
        L  TL+ AL  + SEA+RLP   WEQMLPKKLP+P+S+PSKGTNSV+ SSSSK VNVDKNLP+ DGK
Subjt:  LIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVA-SSSSKAVNVDKNLPAKDGK

KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]4.9e-2076Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDG
        ML+SFN RFIL  TLVLAL S+S++AAR+PT YWEQMLPKKLP+PSSAPSKGTN+VA SSSK + V+ NLPAKDG
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDG

KAF4402307.1 hypothetical protein G4B88_003228 [Cannabis sativa]1.7e-1261.84Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGK
        ML S+  ++ LIF L++A   + SEA+RLP EY++QM+PKKLP+PSS+PSKGTNSV +SSSKAV  D NLP+ DGK
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGK

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1980.82Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAK
        M +SF  RFI I  LVLALAS+SSEAAR+PT+YWEQMLPKKLPTPSSAPSKGTNSVASSS K V VD NLPAK
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAK

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]6.4e-2074.67Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDG
        ML++FN RFIL  TL+LAL S+SS+AAR+PT YWEQMLPKKLP+PSSAPSKGTN+VA SSSK + V+ NLPAKDG
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDG

TrEMBL top hitse value%identityAlignment
A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR53.1e-2074.67Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDG
        ML++FN RFIL  TL+LAL S+SS+AAR+PT YWEQMLPKKLP+PSSAPSKGTN+VA SSSK + V+ NLPAKDG
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDG

A0A7J6I408 Uncharacterized protein8.1e-1361.84Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGK
        ML S+  ++ LIF L++A   + SEA+RLP EY++QM+PKKLP+PSS+PSKGTNSV +SSSKAV  D NLP+ DGK
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGK

A0A7N2MJW9 Uncharacterized protein6.2e-1366.67Show/hide
Query:  LIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGK
        L+FTL+  +  V SEA+RLP EYWEQMLPKKLP PSS+PSKGTNS++ SSSKA+  ++NLP+ DGK
Subjt:  LIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGK

A0A803PS58 Uncharacterized protein4.8e-1356.32Show/hide
Query:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGKDSQSHYSNLSN
        ML S+  ++ L F L++A   + SEA+RLP EY++QM+PKKLP+PSS+PSKGTNSV + SSKAV  D NLP+ DGK+S S +  L N
Subjt:  MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGKDSQSHYSNLSN

W9S9P5 Uncharacterized protein8.1e-1370.15Show/hide
Query:  LIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVA-SSSSKAVNVDKNLPAKDGK
        L  TL+ AL  + SEA+RLP   WEQMLPKKLP+P+S+PSKGTNSV+ SSSSK VNVDKNLP+ DGK
Subjt:  LIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVA-SSSSKAVNVDKNLPAKDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTTTCTTTCAACCTTAGATTCATTCTTATTTTCACGCTTGTTCTCGCTCTCGCCTCCGTGTCGTCGGAGGCAGCGAGGCTGCCAACGGAGTATTGGGAACAAAT
GTTACCGAAGAAGCTGCCAACGCCCTCCTCGGCGCCCTCAAAAGGGACGAATTCCGTGGCTTCCTCCTCTTCTAAAGCTGTGAATGTTGATAAAAACCTTCCCGCGAAGG
ACGGGAAGGACTCTCAATCACATTATTCCAATCTCTCAAATAATTTCTCGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTTTCTTTCAACCTTAGATTCATTCTTATTTTCACGCTTGTTCTCGCTCTCGCCTCCGTGTCGTCGGAGGCAGCGAGGCTGCCAACGGAGTATTGGGAACAAAT
GTTACCGAAGAAGCTGCCAACGCCCTCCTCGGCGCCCTCAAAAGGGACGAATTCCGTGGCTTCCTCCTCTTCTAAAGCTGTGAATGTTGATAAAAACCTTCCCGCGAAGG
ACGGGAAGGACTCTCAATCACATTATTCCAATCTCTCAAATAATTTCTCGATATAA
Protein sequenceShow/hide protein sequence
MLVSFNLRFILIFTLVLALASVSSEAARLPTEYWEQMLPKKLPTPSSAPSKGTNSVASSSSKAVNVDKNLPAKDGKDSQSHYSNLSNNFSI