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Sed0005051 (gene) of Chayote v1 genome

Gene IDSed0005051
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:42542820..42543922
RNA-Seq ExpressionSed0005051
SyntenySed0005051
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034474.1 uncharacterized protein E6C27_scaffold65G004850 [Cucumis melo var. makuwa]2.2e-2148.12Show/hide
Query:  ERRKAHACRATILTVVGRFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILGFLA
        ERR AHA R T+LTVV R AT   H+ATLHGQ   AG VAGRS IVGTVAE+DFVV            +  ++ +     ++L           I+   +
Subjt:  ERRKAHACRATILTVVGRFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILGFLA

Query:  VRVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLPVTHG
        VRVLLV SGV   V +LLV NG  VR +LV++GI A+  L  NGI VH +LV NG+     LV++GVA HVL  VANG+VV  LLVANGI  HV  V H 
Subjt:  VRVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLPVTHG

Query:  AAVAVFVDV-VAYVVAVIF--VVVVITILVISVAVAKNT
        AAV + + V VA VV V+   ++V  T+LVI V V + +
Subjt:  AAVAVFVDV-VAYVVAVIF--VVVVITILVISVAVAKNT

KAE8648766.1 hypothetical protein Csa_007998 [Cucumis sativus]8.5e-2641.58Show/hide
Query:  RFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILG---------FL---------
        R ATVC H+ATLHGQ   AG VAGRS IVGT+AE+     PLT W  +R R+D  L M+       KALQS +NQ R +G         FL         
Subjt:  RFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILG---------FL---------

Query:  -------AVRVLLVASGVAV--------PVHILLVA----------NGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNP
                VR+LLV SGV V         VH+LLV+          NGVAV  +LV NG+    +L  NG+ VH +LV NG+    +LV NGVAVHVL P
Subjt:  -------AVRVLLVASGVAV--------PVHILLVA----------NGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNP

Query:  -----------------------VANGIVVHFLLVANGIVVHVLPVTHGAAV--AVFVDVVAYVVAVIFVVVVITILVISVAVAKNTLSQR
                               V +G+VV  LLVANGI  HV  V H AAV   +F  V  +V+AV F + VI  L++  AV K T SQ+
Subjt:  -----------------------VANGIVVHFLLVANGIVVHVLPVTHGAAV--AVFVDVVAYVVAVIFVVVVITILVISVAVAKNTLSQR

KAG6574041.1 hypothetical protein SDJN03_27928, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1255.56Show/hide
Query:  LLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGI----------VVH
        LLVA+GVA+    LLVANGVA+  LLVANG+ AL LL ANG  +H LLVANG+ A  + VANG+AVHVL  VANGI VH LLVANG+          VVH
Subjt:  LLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGI----------VVH

Query:  VLPVTHGAA-------VAVFVDVVAYVVAVIFVV-VVITILVISVAVAKNTLS
        VL V+H AA       V +FVDVV +   V+F+V V+I +L+I V V + TLS
Subjt:  VLPVTHGAA-------VAVFVDVVAYVVAVIFVV-VVITILVISVAVAKNTLS

KAG7013100.1 hypothetical protein SDJN02_25856, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1153.12Show/hide
Query:  LLVASGVAVPVHI-------LLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGI------
        LLVA+GVA+ + +       LLVANGVA+  LLVANG+ AL LL ANG  +H LLVANG+ A  + VANG+AVHVL  VANGI VH LLVANG+      
Subjt:  LLVASGVAVPVHI-------LLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGI------

Query:  ----VVHVLPVTHGAA-------VAVFVDVVAYVVAVIFVV-VVITILVISVAVAKNTLS
            VVHVL V+H AA       V +FVDVV +   V+F+V V+I +L+I V V + TLS
Subjt:  ----VVHVLPVTHGAA-------VAVFVDVVAYVVAVIFVV-VVITILVISVAVAKNTLS

TrEMBL top hitse value%identityAlignment
A0A0A0KU91 Uncharacterized protein2.1e-2243.5Show/hide
Query:  LCVAERRKAHACRATILTVVGRFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRIL
        L   ERR AHA R T+LTVV R ATVC H+ATLHGQ   AG VAGRS IVGT+AE+     PLT W  +R R+D  L M+       KALQS +NQ R +
Subjt:  LCVAERRKAHACRATILTVVGRFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRIL

Query:  GFLAVRVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLP
        G  AV V+         VH LLV+NG  V   +V NG            GV  LL                       V +G+VV  LLVANGI  HV  
Subjt:  GFLAVRVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLP

Query:  VTHGAAV--AVFVDVVAYVVAVIFVVVVITILVISVAVAKNTLSQR
        V H AAV   +F  V  +V+AV F + VI  L++  AV K T SQ+
Subjt:  VTHGAAV--AVFVDVVAYVVAVIFVVVVITILVISVAVAKNTLSQR

A0A5A7STD6 Uncharacterized protein1.0e-2148.12Show/hide
Query:  ERRKAHACRATILTVVGRFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILGFLA
        ERR AHA R T+LTVV R AT   H+ATLHGQ   AG VAGRS IVGTVAE+DFVV            +  ++ +     ++L           I+   +
Subjt:  ERRKAHACRATILTVVGRFATVCRHIATLHGQ-AGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILGFLA

Query:  VRVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLPVTHG
        VRVLLV SGV   V +LLV NG  VR +LV++GI A+  L  NGI VH +LV NG+     LV++GVA HVL  VANG+VV  LLVANGI  HV  V H 
Subjt:  VRVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLPVTHG

Query:  AAVAVFVDV-VAYVVAVIF--VVVVITILVISVAVAKNT
        AAV + + V VA VV V+   ++V  T+LVI V V + +
Subjt:  AAVAVFVDV-VAYVVAVIF--VVVVITILVISVAVAKNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGTGTTGCAGAAAGAAGAAAGGCGCATGCCTGTCGTGCTACTATTTTGACTGTAGTTGGGCGTTTTGCTACTGTCTGCCGTCACATTGCTACCCTGCAT
GGTCAAGCTGGTGCTGGAATAGTAGCAGGGCGTTCTCCTATCGTTGGAACTGTAGCCGAAAAGGATTTTGTTGTCACACCTCTAACAATTTGGCTGACGAGGAGA
CACCGAATGGATCTGTACCTGTGGATGGTAAAAAGAAGCACCAAAATTCTCAAGGCACTGCAGTCTCGTCGAAATCAACAGCGAATTCTTGGTTTTCTTGCTGTT
CGTGTTCTTCTTGTTGCAAGTGGAGTTGCTGTTCCTGTACATATCCTTCTTGTTGCAAATGGAGTTGCTGTTCGTTTTCTTCTTGTTGCAAATGGAATTCGTGCT
CTTTTTCTTCTTTTCGCAAATGGAATTGGTGTTCATTTTCTTCTTGTTGCAAATGGAATTGGTGCTTGTTTTCTTCTTGTTGCAAATGGAGTTGCAGTTCATGTT
CTAAATCCTGTTGCAAATGGGATTGTTGTCCATTTTCTTCTTGTTGCAAATGGAATTGTTGTTCATGTTCTTCCTGTTACTCATGGAGCTGCAGTAGCTGTTTTT
GTCGATGTTGTCGCGTACGTCGTTGCTGTCATTTTCGTGGTTGTTGTCATTACTATCCTCGTCATATCTGTCGCTGTTGCTAAAAACACACTGTCACAAAGGAAA
TCATGTGACCAAATCCTTGATTGTTCATACACTAGTCTTGGTAGGTGTTTTGAAACAGAATTGAGTCTTAAATGTAAAAAACGTTTCCCCAGCAAGAGGAATTCT
GACAAAATCATTCTTGCAGTTTCAGTTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGTGTTGCAGAAAGAAGAAAGGCGCATGCCTGTCGTGCTACTATTTTGACTGTAGTTGGGCGTTTTGCTACTGTCTGCCGTCACATTGCTACCCTGCAT
GGTCAAGCTGGTGCTGGAATAGTAGCAGGGCGTTCTCCTATCGTTGGAACTGTAGCCGAAAAGGATTTTGTTGTCACACCTCTAACAATTTGGCTGACGAGGAGA
CACCGAATGGATCTGTACCTGTGGATGGTAAAAAGAAGCACCAAAATTCTCAAGGCACTGCAGTCTCGTCGAAATCAACAGCGAATTCTTGGTTTTCTTGCTGTT
CGTGTTCTTCTTGTTGCAAGTGGAGTTGCTGTTCCTGTACATATCCTTCTTGTTGCAAATGGAGTTGCTGTTCGTTTTCTTCTTGTTGCAAATGGAATTCGTGCT
CTTTTTCTTCTTTTCGCAAATGGAATTGGTGTTCATTTTCTTCTTGTTGCAAATGGAATTGGTGCTTGTTTTCTTCTTGTTGCAAATGGAGTTGCAGTTCATGTT
CTAAATCCTGTTGCAAATGGGATTGTTGTCCATTTTCTTCTTGTTGCAAATGGAATTGTTGTTCATGTTCTTCCTGTTACTCATGGAGCTGCAGTAGCTGTTTTT
GTCGATGTTGTCGCGTACGTCGTTGCTGTCATTTTCGTGGTTGTTGTCATTACTATCCTCGTCATATCTGTCGCTGTTGCTAAAAACACACTGTCACAAAGGAAA
TCATGTGACCAAATCCTTGATTGTTCATACACTAGTCTTGGTAGGTGTTTTGAAACAGAATTGAGTCTTAAATGTAAAAAACGTTTCCCCAGCAAGAGGAATTCT
GACAAAATCATTCTTGCAGTTTCAGTTATTTAA
Protein sequenceShow/hide protein sequence
MLCVAERRKAHACRATILTVVGRFATVCRHIATLHGQAGAGIVAGRSPIVGTVAEKDFVVTPLTIWLTRRHRMDLYLWMVKRSTKILKALQSRRNQQRILGFLAV
RVLLVASGVAVPVHILLVANGVAVRFLLVANGIRALFLLFANGIGVHFLLVANGIGACFLLVANGVAVHVLNPVANGIVVHFLLVANGIVVHVLPVTHGAAVAVF
VDVVAYVVAVIFVVVVITILVISVAVAKNTLSQRKSCDQILDCSYTSLGRCFETELSLKCKKRFPSKRNSDKIILAVSVI