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Sed0005052 (gene) of Chayote v1 genome

Gene IDSed0005052
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:6300782..6301496
RNA-Seq ExpressionSed0005052
SyntenySed0005052
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050243.1 hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa]3.7e-0761.76Show/hide
Query:  SLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSSLI
        +++F GLS  SSA DAFV+S  FAFS +L ALL+P + NLA   A+ SL SMASALLLLIWGL  +LI
Subjt:  SLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSSLI

KAG6579131.1 hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1155.88Show/hide
Query:  PITIILKPILFVSMNTLTIL-MFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSS
        P T+IL+ ILF+S N+LTIL +F    +  V F  L       PSS  DAFV+S  FAFS +L ALL+P + NLAT  AL SLASMASALLLLIWGL  S
Subjt:  PITIILKPILFVSMNTLTIL-MFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSS

Query:  LI
         +
Subjt:  LI

KAG6601931.1 hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2666.37Show/hide
Query:  MITPNQIAFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASAL
        M+  +Q AF  P+TI+LKPIL++S+NTL+IL+ L+ RS+    + LIF GLS+PSSAFDAFVLS TFAF  +LGALLIPHKPNLAT Y L S+ASMASAL
Subjt:  MITPNQIAFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASAL

Query:  LLLIWGLSSSLIH
        LLLIWGL  S +H
Subjt:  LLLIWGLSSSLIH

KGN49807.1 hypothetical protein Csa_004664 [Cucumis sativus]2.1e-1564.89Show/hide
Query:  TIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL
        T +L  ILFVS NTLTILMFL+ RS  +  + +IF  LS PS AFDAFVLS TF+FST+LGALLIP+KP LA  YA  S+A MA AL LLI GL
Subjt:  TIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL

KGN49809.1 hypothetical protein Csa_004648 [Cucumis sativus]8.4e-1255.24Show/hide
Query:  AFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL
        +FT P TIILK ILF+S+N+LTIL+     +      ++IF G   PSSA DAF++S  FAFS +L ALL+P +  LA   AL SLAS+ASALLLLIWGL
Subjt:  AFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL

Query:  SSSLI
          +LI
Subjt:  SSSLI

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ9 Uncharacterized protein4.1e-1255.24Show/hide
Query:  AFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL
        +FT P TIILK ILF+S+N+LTIL+     +      ++IF G   PSSA DAF++S  FAFS +L ALL+P +  LA   AL SLAS+ASALLLLIWGL
Subjt:  AFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL

Query:  SSSLI
          +LI
Subjt:  SSSLI

A0A0A0KN11 Uncharacterized protein1.0e-1564.89Show/hide
Query:  TIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL
        T +L  ILFVS NTLTILMFL+ RS  +  + +IF  LS PS AFDAFVLS TF+FST+LGALLIP+KP LA  YA  S+A MA AL LLI GL
Subjt:  TIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGL

A0A5A7U2V8 Uncharacterized protein1.8e-0761.76Show/hide
Query:  SLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSSLI
        +++F GLS  SSA DAFV+S  FAFS +L ALL+P + NLA   A+ SL SMASALLLLIWGL  +LI
Subjt:  SLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSSLI

A0A5B7B2W8 Uncharacterized protein (Fragment)6.7e-0750.54Show/hide
Query:  IILKPILFVSMNTLTILMFLTRRS-DQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTS-LGALLIPHKPNLATIYALCSLASMASALLLLIW
        IIL+ ILF S  T  IL+ L   + D     ++IFKGL    SAF AF++   FAFS +  G ++IPHKP LAT    CS+ASMASA+ LLIW
Subjt:  IILKPILFVSMNTLTILMFLTRRS-DQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTS-LGALLIPHKPNLATIYALCSLASMASALLLLIW

A0A5B7B649 Uncharacterized protein (Fragment)1.1e-0649.46Show/hide
Query:  IILKPILFVSMNTLTILMFLTRRS-DQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTS-LGALLIPHKPNLATIYALCSLASMASALLLLIW
        IIL+ ILF S  T  IL+ L   + D     ++IFKGL    SAF AF++   FAFS +  G ++IPHKP LAT    CS+ASMASA+ L+IW
Subjt:  IILKPILFVSMNTLTILMFLTRRS-DQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTS-LGALLIPHKPNLATIYALCSLASMASALLLLIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACCCCAAACCAAATTGCTTTCACTCACCCAATTACAATAATCTTGAAGCCCATTTTGTTTGTGTCTATGAACACTCTCACAATTCTCATGTTCTTGACAAGAAG
AAGTGATCAAGTGGATTTCATGAGCTTGATCTTCAAAGGCCTTTCCGATCCCTCTTCTGCCTTTGATGCCTTTGTTTTATCCAATACCTTTGCTTTCTCAACTTCTTTGG
GTGCTCTTTTGATTCCACATAAGCCCAACTTAGCCACCATTTATGCACTTTGTTCATTGGCTTCCATGGCTTCTGCTTTGCTTCTGCTCATTTGGGGGCTATCTTCTTCA
CTCATTCATATCCAAAGTTCAATGCAACTTTGA
mRNA sequenceShow/hide mRNA sequence
AAGGGAAGAACTTCGCTGCCATCTCTCTCCCTCTCTTCCTCCCTGGATGGCATGCAACTCAGAAAAGGAAGAAAATGATAACCCCAAACCAAATTGCTTTCACTCACCCA
ATTACAATAATCTTGAAGCCCATTTTGTTTGTGTCTATGAACACTCTCACAATTCTCATGTTCTTGACAAGAAGAAGTGATCAAGTGGATTTCATGAGCTTGATCTTCAA
AGGCCTTTCCGATCCCTCTTCTGCCTTTGATGCCTTTGTTTTATCCAATACCTTTGCTTTCTCAACTTCTTTGGGTGCTCTTTTGATTCCACATAAGCCCAACTTAGCCA
CCATTTATGCACTTTGTTCATTGGCTTCCATGGCTTCTGCTTTGCTTCTGCTCATTTGGGGGCTATCTTCTTCACTCATTCATATCCAAAGTTCAATGCAACTTTGATGT
AATCACACTATGAAATGTCCTTTGATATTGAATCTAAATCTATTTCAATTATTCTCCTTTTTCTATGATGTTATCAAATAAGAATGTGAAGCAAGATTGCTTTGCTAACC
ATATCAATGGAAAGACATTGTTTTATACTTTAGACCCAGTTCCATGGCTCTTTTAGCTCCATTTTTTTTGGATATCTTTGCTAAATTTCATACTACATATATATACTTGA
GACCTTGAGGAAAACATACTCTCAAAGCCCAAGTCTTCAACCACTGCACCACCCC
Protein sequenceShow/hide protein sequence
MITPNQIAFTHPITIILKPILFVSMNTLTILMFLTRRSDQVDFMSLIFKGLSDPSSAFDAFVLSNTFAFSTSLGALLIPHKPNLATIYALCSLASMASALLLLIWGLSSS
LIHIQSSMQL