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Sed0005053 (gene) of Chayote v1 genome

Gene IDSed0005053
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:48631446..48631857
RNA-Seq ExpressionSed0005053
SyntenySed0005053
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049530.1 hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa]2.2e-0751.09Show/hide
Query:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLADN
        +P      AFD A     S TGG QP + +  +   +   AAS++MGKALA+RAVYG+Q  R GRRR   I  HGA RLLPS LS+VSLAD+
Subjt:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLADN

KAG2726969.1 hypothetical protein I3760_01G138000 [Carya illinoinensis]8.3e-0750.55Show/hide
Query:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS
        M+ EK N    DL  A T+S    T  KK   K        AA+S++GKALAQRA+YGS   R G R+I   GARLLPSRLSKVSL ++S+
Subjt:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS

KAG6597562.1 hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia]7.8e-1356.38Show/hide
Query:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSSASN
        MS E+P+ R FD A     +   G QP K  +   N S   AASS++GKALA RAVYG+Q    GRRR  +HG RLLPSRLSKVSLADNSS S+
Subjt:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSSASN

KAG6668024.1 hypothetical protein CIPAW_01G142300 [Carya illinoinensis]3.2e-0648.35Show/hide
Query:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS
        M+ EK N    DL  A T+S    T  KK   K         A+S++GKALAQRA+YGS   R G R++   GARLLPSRLSKVSL ++S+
Subjt:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS

KGN57150.1 hypothetical protein Csa_011148 [Cucumis sativus]6.8e-0952.83Show/hide
Query:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNN------SKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLAD---
        +P      AFD A     + TGG QP   +EKN N+      +   AAS+++GKALA+RAVYGSQ  R GRRR   I  HGA RLLPSRLSKVSLAD   
Subjt:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNN------SKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLAD---

Query:  NSSASN
        NSS S+
Subjt:  NSSASN

TrEMBL top hitse value%identityAlignment
A0A0A0L5C0 Uncharacterized protein3.3e-0952.83Show/hide
Query:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNN------SKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLAD---
        +P      AFD A     + TGG QP   +EKN N+      +   AAS+++GKALA+RAVYGSQ  R GRRR   I  HGA RLLPSRLSKVSLAD   
Subjt:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNN------SKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLAD---

Query:  NSSASN
        NSS S+
Subjt:  NSSASN

A0A5A7U2I2 Uncharacterized protein1.1e-0751.09Show/hide
Query:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLADN
        +P      AFD A     S TGG QP + +  +   +   AAS++MGKALA+RAVYG+Q  R GRRR   I  HGA RLLPS LS+VSLAD+
Subjt:  SPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRR---ILIHGA-RLLPSRLSKVSLADN

A0A5C7IRA7 Uncharacterized protein2.2e-0545.05Show/hide
Query:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS
        M+ EK N R  +     +TS+    QP         N+KG A++S++GKALA+RA+ GSQ  R   R++   GAR+LPSRLSKVSLA+  S
Subjt:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS

A0A5N5LPM7 Uncharacterized protein7.1e-0441.76Show/hide
Query:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS
        MS EK N+   + ++++       T P   S  N N+           K LAQRA++GS+  R   R+I  +GA LLPSRLSKVSLAD+SS
Subjt:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSS

A0A7J7CXR7 Uncharacterized protein4.2e-0440.66Show/hide
Query:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGR--RRILIHGARLLPSRLSKVSLADN
        M+ E+      D +T++        +P      N+           +GKALAQRA+YGSQP R+    R++   GA LLPSRLSKVSLADN
Subjt:  MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGR--RRILIHGARLLPSRLSKVSLADN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCTGAGAAACCCAATTTGAGAGCTTTCGATCTCGCCACCGCCACTACCACCTCCGCCACAGGTGGAACGCAACCGAAAAAATCGTCGGAAAAGAACGTCAACAA
CTCGAAAGGCGACGCCGCCAGCTCCGATATGGGAAAGGCTTTGGCGCAGAGAGCAGTTTATGGATCTCAACCGTGGCGAAAAGGAAGAAGAAGAATCCTCATCCATGGCG
CCCGGCTGCTTCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAATTCCTCAGCTTCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTCAAAAACCACCAATTCTTCAATAATCTTCTTCATCTCAAACTCCAAAAACACAACAAAATAGTACTAAATGAGTCCTGAGAAACCCAATTTGAGAGCTTTCGATC
TCGCCACCGCCACTACCACCTCCGCCACAGGTGGAACGCAACCGAAAAAATCGTCGGAAAAGAACGTCAACAACTCGAAAGGCGACGCCGCCAGCTCCGATATGGGAAAG
GCTTTGGCGCAGAGAGCAGTTTATGGATCTCAACCGTGGCGAAAAGGAAGAAGAAGAATCCTCATCCATGGCGCCCGGCTGCTTCCTAGCAGGCTGAGCAAAGTTTCTTT
AGCTGATAATTCCTCAGCTTCTAATTAATTTTTTTTTATGTGTATAAAGTTGGTAAATATTGTTTGTCACTAAGTAATGTGA
Protein sequenceShow/hide protein sequence
MSPEKPNLRAFDLATATTTSATGGTQPKKSSEKNVNNSKGDAASSDMGKALAQRAVYGSQPWRKGRRRILIHGARLLPSRLSKVSLADNSSASN