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Sed0005061 (gene) of Chayote v1 genome

Gene IDSed0005061
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain protein
Genome locationLG01:6898472..6898932
RNA-Seq ExpressionSed0005061
SyntenySed0005061
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463409.1 PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]5.2e-2665.71Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETL-KRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQS
        MGNC+SNKYLA+TMPMSDD+EE  E L +R V +       + TT +LKIRITK+ELEKLL KVD+EELPV E+LS+LI+VGDAFES+ ++ SW+PSLQS
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETL-KRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQS

Query:  IPERN
        IPE N
Subjt:  IPERN

XP_022932152.1 uncharacterized protein LOC111438472 [Cucurbita moschata]2.0e-2566.67Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSI
        MGNC+SNKYLA+TMPMS ++EE VET+KR + + +DG  +  TT ++KIR+TKRELEKLLSKV+VEELPVTE+L ++IEVGD  ES+ ++ SWRPSLQSI
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSI

Query:  PE
        PE
Subjt:  PE

XP_022985276.1 uncharacterized protein LOC111483315 [Cucurbita maxima]1.7e-2466.36Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKS-----LTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRP
        MGNC+SNKYLA+TMPMS ++EE VETLKR + + +DG  +S      TT ++KIR+TKRELEKLLSKV+VEELPVTE+L +LIEVGD  ES+ ++ SWRP
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKS-----LTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRP

Query:  SLQSIPE
        SLQSIPE
Subjt:  SLQSIPE

XP_031739098.1 uncharacterized protein LOC116402843 [Cucumis sativus]3.0e-2668.87Show/hide
Query:  MGNCSSNKYLADT-MPMSDDDEEAVETLKRTVFDGNDG-VLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQ
        MGNC+SNKYLA+T +PMSDDDEE  E L+R +   N      + TT +LKIRITKRELEKLL KVDVEELPVTE+LS+LI+VGD FES+ +Q SWRPSLQ
Subjt:  MGNCSSNKYLADT-MPMSDDDEEAVETLKRTVFDGNDG-VLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQ

Query:  SIPERN
        SIPE N
Subjt:  SIPERN

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]2.7e-3074.53Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLK--SLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQ
        MGNC+SNKYLA+TMPMSD+DEEAVET++R +   +DG  K  + TT +LKIRITKRELEKLLSKVDVEELPVTE+LS+LI+VGDAFES+ +Q SWRPSLQ
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLK--SLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQ

Query:  SIPERN
        SIPE N
Subjt:  SIPERN

TrEMBL top hitse value%identityAlignment
A0A0A0L2D8 Uncharacterized protein1.5e-2668.87Show/hide
Query:  MGNCSSNKYLADT-MPMSDDDEEAVETLKRTVFDGNDG-VLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQ
        MGNC+SNKYLA+T +PMSDDDEE  E L+R +   N      + TT +LKIRITKRELEKLL KVDVEELPVTE+LS+LI+VGD FES+ +Q SWRPSLQ
Subjt:  MGNCSSNKYLADT-MPMSDDDEEAVETLKRTVFDGNDG-VLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQ

Query:  SIPERN
        SIPE N
Subjt:  SIPERN

A0A1S3CJ77 uncharacterized protein LOC1035015802.5e-2665.71Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETL-KRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQS
        MGNC+SNKYLA+TMPMSDD+EE  E L +R V +       + TT +LKIRITK+ELEKLL KVD+EELPV E+LS+LI+VGDAFES+ ++ SW+PSLQS
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETL-KRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQS

Query:  IPERN
        IPE N
Subjt:  IPERN

A0A5D3BTQ9 DUF4228 domain protein2.5e-2665.71Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETL-KRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQS
        MGNC+SNKYLA+TMPMSDD+EE  E L +R V +       + TT +LKIRITK+ELEKLL KVD+EELPV E+LS+LI+VGDAFES+ ++ SW+PSLQS
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETL-KRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQS

Query:  IPERN
        IPE N
Subjt:  IPERN

A0A6J1EVV2 uncharacterized protein LOC1114384729.6e-2666.67Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSI
        MGNC+SNKYLA+TMPMS ++EE VET+KR + + +DG  +  TT ++KIR+TKRELEKLLSKV+VEELPVTE+L ++IEVGD  ES+ ++ SWRPSLQSI
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSI

Query:  PE
        PE
Subjt:  PE

A0A6J1J7P7 uncharacterized protein LOC1114833158.1e-2566.36Show/hide
Query:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKS-----LTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRP
        MGNC+SNKYLA+TMPMS ++EE VETLKR + + +DG  +S      TT ++KIR+TKRELEKLLSKV+VEELPVTE+L +LIEVGD  ES+ ++ SWRP
Subjt:  MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKS-----LTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRP

Query:  SLQSIPE
        SLQSIPE
Subjt:  SLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.2.9e-0635.65Show/hide
Query:  MGNC---SSNKYLA--DTMPMSDDDEEAVETLKRTVFDGNDGVL-----KSLTTAKLKIRITKRELEKLLSKVDVEELPVTEM-LSRLIEVGDAFESSAY
        MGNC    S  + A  D      +DEE      +T  DG   ++      S+ + ++KIR+TK++L  LLSKV+V +L   +   S  I     +E +  
Subjt:  MGNC---SSNKYLA--DTMPMSDDDEEAVETLKRTVFDGNDGVL-----KSLTTAKLKIRITKRELEKLLSKVDVEELPVTEM-LSRLIEVGDAFESSAY

Query:  QGSWRPSLQSIPERN
        Q  WRP LQSIPE N
Subjt:  QGSWRPSLQSIPERN

AT4G21920.1 unknown protein3.7e-0637.36Show/hide
Query:  DDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLI-EVGDAFESSA-----YQGSWRPSLQSIPE
        DD+++  + L  T    +     S    ++KIRITK+ELE L+  + ++ L   E+LS+LI E GD    SA     +   W+P LQSIPE
Subjt:  DDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLI-EVGDAFESSA-----YQGSWRPSLQSIPE

AT5G03890.1 unknown protein2.0e-0432.93Show/hide
Query:  EEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSIPE
        EE   +   +  DG+D   K++T  ++KI + K+ELEKLL    V E+    +  +L+      +       WRP+L SIPE
Subjt:  EEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGTAGCAGCAACAAATATTTGGCGGATACAATGCCGATGAGCGACGACGACGAGGAGGCGGTAGAGACGCTGAAAAGGACGGTATTTGATGGTAATGACGG
AGTTCTGAAATCTTTGACCACAGCAAAGCTGAAGATCAGGATCACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGATGTAGAAGAGCTGCCGGTGACTGAGATGT
TATCACGATTGATCGAAGTTGGCGATGCGTTCGAGAGTAGTGCTTACCAAGGATCTTGGAGGCCTTCTTTGCAAAGCATTCCTGAGCGTAATTGA
mRNA sequenceShow/hide mRNA sequence
CCACTTTCTTTTTTTCTTTCTCAAAAGATCAATTGTATCCACGCCATGGGAAATTGTAGCAGCAACAAATATTTGGCGGATACAATGCCGATGAGCGACGACGACGAGGA
GGCGGTAGAGACGCTGAAAAGGACGGTATTTGATGGTAATGACGGAGTTCTGAAATCTTTGACCACAGCAAAGCTGAAGATCAGGATCACAAAGAGAGAGCTGGAGAAGT
TATTGAGCAAAGTGGATGTAGAAGAGCTGCCGGTGACTGAGATGTTATCACGATTGATCGAAGTTGGCGATGCGTTCGAGAGTAGTGCTTACCAAGGATCTTGGAGGCCT
TCTTTGCAAAGCATTCCTGAGCGTAATTGAACAAAAGATGTTAAAACTTGCAAATATGGATTCATGGTTGTGTGTGTGTGTTTTTTTTTTTTGAATGATCGAGAATATTA
AATTATAATTTTGGAAATTGT
Protein sequenceShow/hide protein sequence
MGNCSSNKYLADTMPMSDDDEEAVETLKRTVFDGNDGVLKSLTTAKLKIRITKRELEKLLSKVDVEELPVTEMLSRLIEVGDAFESSAYQGSWRPSLQSIPERN