| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 4.2e-167 | 95.28 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G+SYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDS +ATGEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK+ WVES PTRVF+LD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 3.2e-167 | 95.28 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G+SYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDS +ATGEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK WVES PTRVF+LDPVTHQV+VV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 5.1e-165 | 94.03 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GASYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+DS +A+GE LD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEE+K WVES PTRVF++DP THQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| XP_022927752.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucurbita moschata] | 7.1e-167 | 94.97 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GASYQRFPKVKIRELRDDYAKFEL DTDVS+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDS +A GEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK +WVESSPT+VF+LDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| XP_038891253.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Benincasa hispida] | 8.7e-165 | 93.71 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G+SYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCH+DQTLDVTSKDLYSSDHTVVPVDFSDS +ATGEALD+KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
+TLT EEK+ WVES PTRVF+ D VTHQV VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 2.0e-167 | 95.28 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G+SYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDS +ATGEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK+ WVES PTRVF+LD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 1.6e-167 | 95.28 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G+SYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDS +ATGEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK WVES PTRVF+LDPVTHQV+VV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 2.5e-165 | 94.03 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GASYQRFPKVKIRELRDDYAKFELRDTD S+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+DS +A+GE LD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEE+K WVES PTRVF++DP THQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.5e-167 | 94.97 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GASYQRFPKVKIRELRDDYAKFEL DTDVS+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDS +A GEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK +WVESSPT+VF+LDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.5e-167 | 94.97 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GASYQRFPKVKIRELRDDYAKFEL DTDVS+ANALRRVMIAEVPTIAIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDS +A GEALD KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
ETLTLEEK +WVESSPT+VF+LDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTG IKASQLILNAIDILKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 2.8e-49 | 40.69 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + +TD+++AN++RRV IAEVP IAID V+I+ NSSVL DEFIAHRLGLIPLTSD + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKL
+ + W +S Y+ DE +A D + + F + VES G ++ ++L+A+ LK+KL
Subjt: LTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 3.2e-146 | 82.08 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GA+YQRFPK+KIREL+DDYAKFELR+TDVS+ANALRRVMI+EVPT+AIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ S+ ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED+M
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
+TL+ EEK +ESSPT+VF +DPVT QVVVVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFIFTVESTG +KASQL+LNAID+LKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 3.4e-135 | 77.04 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G +YQRFP VKIREL+DDYAKFELR+TDVS+ANALRRVMI+EVPT+AI LV+IEVNSSVL DEFIA RL LIPLTS+RAMSMRF +DC+ C+GD CEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ S S+T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE++M
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
TLT EEK +ESSPT+VF +DPVT QVVVVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+FTVESTG +KASQL+LNAIDILKQKLDA+RLSD+
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMR G
Subjt: TVEADDQFGELGAHMRGG
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 9.7e-50 | 41.03 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + +TD+++AN++RRV IAEVP IAID V+I+ NSSVL DEFIAHRLGLIPLTSD + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKL
+ + W +S Y+ DE +A D + + F + VES G ++ ++L+A+ LK+KL
Subjt: LTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 8.4e-70 | 49.49 | Show/hide |
Query: RFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFH
R P+++I E+++D F L +TD+S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL SD ++RDC D +C+ CSVE
Subjt: RFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFH
Query: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
L KC ++ DVTS DL S + V+PV S S+ E + I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+ T+ ++P I +N++ ++ LT
Subjt: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
Query: EEKKAWVESSPTRVFDLDP--VTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVR
++K+ WV S PT+V+ P T QV + DP Y E KKAE+ GK LV + ++D FIFTVES+G +K ++L AI I+K+KL ++
Subjt: EEKKAWVESSPTRVFDLDP--VTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 4.3e-29 | 31.66 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ D + ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ +D + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSGSATGEALDAK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P FS S + E + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSGSATGEALDAK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKKAWVESSPTRVFDLDPV---THQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIK
SP T + P + + ++ + L + V P VFD++ + + V P T E ++ + + VD+ + ++ FIF +ESTG +
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKKAWVESSPTRVFDLDPV---THQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 4.3e-29 | 31.66 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ D + ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ +D + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSGSATGEALDAK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P FS S + E + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSGSATGEALDAK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKKAWVESSPTRVFDLDPV---THQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIK
SP T + P + + ++ + L + V P VFD++ + + V P T E ++ + + VD+ + ++ FIF +ESTG +
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKKAWVESSPTRVFDLDPV---THQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 2.4e-136 | 77.04 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G +YQRFP VKIREL+DDYAKFELR+TDVS+ANALRRVMI+EVPT+AI LV+IEVNSSVL DEFIA RL LIPLTS+RAMSMRF +DC+ C+GD CEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ S S+T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE++M
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
TLT EEK +ESSPT+VF +DPVT QVVVVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+FTVESTG +KASQL+LNAIDILKQKLDA+RLSD+
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMR G
Subjt: TVEADDQFGELGAHMRGG
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 1.6e-92 | 74.67 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
G +YQRFP VKIREL+DDYAKFELR+TDVS+ANALRRVMI+EVPT+AI LV+IEVNSSVL DEFIA RL LIPLTS+RAMSMRF +DC+ C+GD CEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ S S+T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE++M
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQV
TLT EEK +ESSPT+VF +DPVT QV
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 2.3e-147 | 82.08 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
GA+YQRFPK+KIREL+DDYAKFELR+TDVS+ANALRRVMI+EVPT+AIDLVEIEVNSSVL DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFC
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDVSIANALRRVMIAEVPTIAIDLVEIEVNSSVLGDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
SVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ S+ ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED+M
Subjt: SVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSGSATGEALDAKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLM
Query: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
+TL+ EEK +ESSPT+VF +DPVT QVVVVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFIFTVESTG +KASQL+LNAID+LKQKLDAVRLSDD
Subjt: ETLTLEEKKAWVESSPTRVFDLDPVTHQVVVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGGIKASQLILNAIDILKQKLDAVRLSDD
Query: TVEADDQFGELGAHMRGG
TVEADDQFGELGAHMRGG
Subjt: TVEADDQFGELGAHMRGG
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