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Sed0005066 (gene) of Chayote v1 genome

Gene IDSed0005066
OrganismSechium edule (Chayote v1)
DescriptionAutophagy-related protein 3
Genome locationLG07:30959587..30959793
RNA-Seq ExpressionSed0005066
SyntenySed0005066
Gene Ontology termsGO:0019787 - ubiquitin-like protein transferase activity (molecular function)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650146.1 hypothetical protein Csa_010997, partial [Cucumis sativus]2.2e-1775.76Show/hide
Query:  MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQSGRDDPQT
        MDG  EK RA T+N S CDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK N SLQSGR+D  T
Subjt:  MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQSGRDDPQT

KAF3432968.1 hypothetical protein FNV43_RR24070 [Rhamnella rubrinervis]1.1e-1158.62Show/hide
Query:  MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQ
        MD + E  ++A++ +SACDVEAL+KCL EN GD +KC++Q++AFKSSC+LKKPN S +
Subjt:  MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQ

KAG4966720.1 hypothetical protein JHK87_032371 [Glycine soja]4.0e-1167.27Show/hide
Query:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        G+   +  + ISACDVEAL+KCL+EN GD +KC SQI+AFKSSCSLKKPN SL S
Subjt:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

KAG4979183.1 hypothetical protein JHK85_033141 [Glycine max]4.0e-1167.27Show/hide
Query:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        G+   +  + ISACDVEAL+KCL+EN GD +KC SQI+AFKSSCSLKKPN SL S
Subjt:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

KAG5138999.1 hypothetical protein JHK84_032767 [Glycine max]4.0e-1167.27Show/hide
Query:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        G+   +  + ISACDVEAL+KCL+EN GD +KC SQI+AFKSSCSLKKPN SL S
Subjt:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

TrEMBL top hitse value%identityAlignment
A0A0A0L2G8 Uncharacterized protein5.7e-1976.47Show/hide
Query:  MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQSGRDDPQTGV
        MDG  EK RA T+N S CDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK N SLQSGR+D  TGV
Subjt:  MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQSGRDDPQTGV

A0A0B2RGP3 Autophagy-related protein 32.0e-1167.27Show/hide
Query:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        G+   +  + ISACDVEAL+KCL+EN GD +KC SQI+AFKSSCSLKKPN SL S
Subjt:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

A0A2C9VSE9 Uncharacterized protein2.0e-1164.91Show/hide
Query:  GEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        GE  +   A + +S CDVEAL+KCL+EN GD +KC+SQI+AFKSSCSLKKP++SLQS
Subjt:  GEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

A0A445HIR8 Uncharacterized protein2.0e-1167.27Show/hide
Query:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        G+   +  + ISACDVEAL+KCL+EN GD +KC SQI+AFKSSCSLKKPN SL S
Subjt:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

K7LSA0 Uncharacterized protein2.0e-1167.27Show/hide
Query:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS
        G+   +  + ISACDVEAL+KCL+EN GD +KC SQI+AFKSSCSLKKPN SL S
Subjt:  GEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTGAAGGGGAAAAGTATAGGGCTGCGACGAGAAATATATCGGCATGCGACGTTGAAGCTCTCAGGAAATGTTTGCAGGAAAACAATGGTGATCGTATGAAGTG
CGAGTCTCAAATACAGGCGTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATGCATCCTTGCAATCTGGAAGGGACGACCCCCAGACTGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTGAAGGGGAAAAGTATAGGGCTGCGACGAGAAATATATCGGCATGCGACGTTGAAGCTCTCAGGAAATGTTTGCAGGAAAACAATGGTGATCGTATGAAGTG
CGAGTCTCAAATACAGGCGTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATGCATCCTTGCAATCTGGAAGGGACGACCCCCAGACTGGTGTTTGA
Protein sequenceShow/hide protein sequence
MDGEGEKYRAATRNISACDVEALRKCLQENNGDRMKCESQIQAFKSSCSLKKPNASLQSGRDDPQTGV