CuGenDBv2

Gene ID	Sed0005083
Organism	Sechium edule (Chayote v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Genome location	LG11:1000600..1004616
RNA-Seq Expression	Sed0005083
Synteny	Sed0005083
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-66

89.13

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPICSFNASTKP PGVFVGNSVP KAFRINE FQRTNP K+LS EVKASDG DSN+ TTKYKSIVCTDC+GNGA+QCAQC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

XP_004139310.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus]

4.1e-63

83.94

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNG
        MA+SICSSTPICSFN S+ PKPGV VGNSVP KAFRINE FQ+TN  ++LSFEVKASDG DS QTTKYKSIVCTDC+GNGA+QC+QCKGTGVNS DHFNG
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNG

Query:  RFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        +FKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  RFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]

1.5e-65

88.41

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPICSFNASTKP PGVFVGNSVP KAFRINE FQRTNP K+LS EVKASDG  SN+ TTKYKSIVCTDC+GNGA+QCAQC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

XP_022965999.1 uncharacterized protein LOC111465718 [Cucurbita maxima]

4.4e-65

88.41

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPI SFNASTKP PGVFVGNSVP KAFRINE FQRTNP K+LS EVKASDG DSN+ TTKYKSIVCTDC+GNGA+QCAQC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

XP_023537582.1 uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo]

2.8e-64

86.96

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPICSFNASTKP PGVFVGNSVP KAFRINE FQRTNP K+LS EVKAS+  DS + TTKYKSIVCTDC+GNGA+QCAQC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFZ2 Uncharacterized protein

2.0e-63

83.94

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNG
        MA+SICSSTPICSFN S+ PKPGV VGNSVP KAFRINE FQ+TN  ++LSFEVKASDG DS QTTKYKSIVCTDC+GNGA+QC+QCKGTGVNS DHFNG
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNG

Query:  RFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        +FKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  RFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

A0A5A7V544 Chaperone protein DnaJ-like

1.1e-61

81.75

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNG
        MA+SICSSTPICSFN S+ PKPGV VGNSVP KAFR+NE  QRTNP + LSFE KASDG DS QTTKYKSIVCTDC+GNGA+ C+QCKGTGVNS DHFNG
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNG

Query:  RFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        +FKAGGLCWLCRGKRD+LCG CNGAGFVGGFM+T DS
Subjt:  RFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

A0A6J1CMI1 uncharacterized protein LOC111012989

6.4e-62

84.06

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPICSFNAS KPKPGVFV N V  KAF+ NE FQRTNP ++LSFEVKAS G DSNQ TTKYKSI+C DCEGNGA+ C+QCKGTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

A0A6J1FIB2 uncharacterized protein LOC111444376

7.3e-66

88.41

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPICSFNASTKP PGVFVGNSVP KAFRINE FQRTNP K+LS EVKASDG  SN+ TTKYKSIVCTDC+GNGA+QCAQC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

A0A6J1HSG2 uncharacterized protein LOC111465718

2.1e-65

88.41

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Query:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN
        MAYSICSSTPI SFNASTKP PGVFVGNSVP KAFRINE FQRTNP K+LS EVKASDG DSN+ TTKYKSIVCTDC+GNGA+QCAQC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQ-TTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS
        GRFKAGGLCWLCRGKRDILCG CNGAGFVGGFM+T DS
Subjt:  GRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGDS

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

7.3e-31

51.43

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Query:  MAYSIC--SSTPICSFNASTK-PKPGVFVG-NSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSED
        MA S+C  SS P   F + +K PKP  F   N       +  E+ Q    S+  SFEVKA++  ++ Q TK  S+VC +CEG G + C+QCKG GVN  D
Subjt:  MAYSIC--SSTPICSFNASTK-PKPGVFVG-NSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSED

Query:  HFNGRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGD
        HFNG+FKAG LCWLCRGK+++LCG+CNGAGF+GGF++T D
Subjt:  HFNGRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGD

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

2.0e-28

64.44

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Query:  KVLSFEVKASDGPDS-NQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNGRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGD
        K L  + KA++   S  +  K KSI+C DCEGNGAI C +C+G GVNS D+F GRFKAG LCWLCRGKR+ILCGNCNGAGF+GGF++T D
Subjt:  KVLSFEVKASDGPDS-NQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNGRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGD

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

5.2e-32

51.43

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Query:  MAYSIC--SSTPICSFNASTK-PKPGVFVG-NSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSED
        MA S+C  SS P   F + +K PKP  F   N       +  E+ Q    S+  SFEVKA++  ++ Q TK  S+VC +CEG G + C+QCKG GVN  D
Subjt:  MAYSIC--SSTPICSFNASTK-PKPGVFVG-NSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSED

Query:  HFNGRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGD
        HFNG+FKAG LCWLCRGK+++LCG+CNGAGF+GGF++T D
Subjt:  HFNGRFKAGGLCWLCRGKRDILCGNCNGAGFVGGFMNTGD

Sequences

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CDS sequence

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ATGGCATATTCTATTTGTTCTTCAACACCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAAACCAGGGGTTTTTGTTGGAAATTCAGTGCCACATAAGGCCTTTAGGAT
AAATGAAGTGTTTCAAAGAACAAACCCTAGTAAGGTTTTGTCTTTTGAGGTTAAGGCTTCAGATGGTCCAGATAGTAACCAAACCACAAAGTACAAAAGCATAGTTTGCA
CAGACTGTGAGGGAAATGGTGCTATTCAATGTGCTCAGTGTAAAGGAACAGGAGTTAATTCAGAGGATCACTTCAATGGGCGGTTTAAAGCTGGTGGCTTATGCTGGCTG
TGCAGAGGCAAAAGGGACATCCTTTGTGGGAACTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAATACAGGTGATAGTTAG

mRNA sequence

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CAATTCCCACCAACTAAATCACATACAAGAAGAAGCTCACACTCTGCTTCTGAATTTCACTCCTCAAGAACAAATACCAAAAGCTTCAAAACCCATTTTAATGGCATATT
CTATTTGTTCTTCAACACCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAAACCAGGGGTTTTTGTTGGAAATTCAGTGCCACATAAGGCCTTTAGGATAAATGAAGTG
TTTCAAAGAACAAACCCTAGTAAGGTTTTGTCTTTTGAGGTTAAGGCTTCAGATGGTCCAGATAGTAACCAAACCACAAAGTACAAAAGCATAGTTTGCACAGACTGTGA
GGGAAATGGTGCTATTCAATGTGCTCAGTGTAAAGGAACAGGAGTTAATTCAGAGGATCACTTCAATGGGCGGTTTAAAGCTGGTGGCTTATGCTGGCTGTGCAGAGGCA
AAAGGGACATCCTTTGTGGGAACTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAATACAGGTGATAGTTAGTACTTGGTACTGCAAAGTTTGAGTTTTCTTGTCGAA
GCAGGCCGAGCACAACGGTAGTTGGCATGTATCTTCGACCAAAAGATCACATGTTCAAATCTTCCAACCCTTGTGTATGGTTGATGTACTAAAAATAAGTTTGAGTTTTC
AAGCTGCATCAAAAATTGGAGTATTTTAAGTCAAATTATAGTCTATCTGAGATGAAAAACCTTATTAATTTCAGCAATTTTGTATAATGGGTCATATAATTTCCGAGTTT
GTAATTGAAAATTATGAATATTCTTCTGCTATTGACTTTTTTTTTGTTTGCATCCCTTTTGAGATCTTTGAGGTGTAATATATGATTATTATATGATTTTAGATTTCTTG
AATGATCAAAATTTGGC

Protein sequence

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MAYSICSSTPICSFNASTKPKPGVFVGNSVPHKAFRINEVFQRTNPSKVLSFEVKASDGPDSNQTTKYKSIVCTDCEGNGAIQCAQCKGTGVNSEDHFNGRFKAGGLCWL
CRGKRDILCGNCNGAGFVGGFMNTGDS

Sed0005083 (gene) of Chayote v1 genome