CuGenDBv2

Gene ID	Sed0005088
Organism	Sechium edule (Chayote v1)
Description	multiprotein bridging factor 1C
Genome location	LG11:637240..637635
RNA-Seq Expression	Sed0005088
Synteny	Sed0005088
Gene Ontology terms	GO:0009408 - response to heat (biological process) GO:0009414 - response to water deprivation (biological process) GO:0009737 - response to abscisic acid (biological process) GO:0009873 - ethylene-activated signaling pathway (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0005730 - nucleolus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR001387 - Cro/C1-type helix-turn-helix domain IPR010982 - Lambda repressor-like, DNA-binding domain superfamily IPR013729 - Multiprotein bridging factor 1, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

TYK10712.1 multiprotein-bridging factor 1c [Cucumis melo var. makuwa]

1.1e-28

62.76

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    + P     R+P      +R    VQTVKKFDAG N+K AAAPVNARKL+EGTEPA       EVR  IQKAR+ KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRG+  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

XP_004139340.1 multiprotein-bridging factor 1c [Cucumis sativus]

6.3e-29

63.45

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    + P     R+P      +R    VQTVKKFDAG N+K  AAPVNARKLEEGTEPA       EVR  IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRG+  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

XP_022937454.1 multiprotein-bridging factor 1c [Cucurbita moschata]

2.2e-29

64.83

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    S P     R+P      +R    V TVKKFDAGSN+KA AAPVNARKLEEGTEPA       EVR  IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        EL  QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRGK  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

XP_022965996.1 multiprotein-bridging factor 1c [Cucurbita maxima]

7.5e-30

65.52

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    S P     R+P      +R    V TVKKFDAGSN+KA AAPVNARKLEEGTEPA       EVR  IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRGK  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

XP_038890461.1 multiprotein-bridging factor 1c [Benincasa hispida]

7.5e-30

64.83

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEP-------AEVRLMIQKARLGKKMSQA
        M SRFPGA       V    + P     R+P      +R    VQTVKKFDAGSN+KAAAAPVNARKL+E TEP       AEVRL IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEP-------AEVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRG+  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFV9 HTH cro/C1-type domain-containing protein

3.1e-29

63.45

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    + P     R+P      +R    VQTVKKFDAG N+K  AAPVNARKLEEGTEPA       EVR  IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRG+  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

A0A5A7V2S1 Multiprotein-bridging factor 1c

6.8e-29

62.76

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    + P     R+P      +R    VQTVKKFDAG N+K AAAPVNARKL+EGTEPA       EVR  IQKAR+ KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRG+  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

A0A5D3CHG2 Multiprotein-bridging factor 1c

5.2e-29

62.76

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    + P     R+P      +R    VQTVKKFDAG N+K AAAPVNARKL+EGTEPA       EVR  IQKAR+ KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRG+  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

A0A6J1FB80 multiprotein-bridging factor 1c

1.1e-29

64.83

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    S P     R+P      +R    V TVKKFDAGSN+KA AAPVNARKLEEGTEPA       EVR  IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        EL  QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRGK  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

A0A6J1HN61 multiprotein-bridging factor 1c

3.6e-30

65.52

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Query:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA
        M SRFPGA       V    S P     R+P      +R    V TVKKFDAGSN+KA AAPVNARKLEEGTEPA       EVR  IQKARL KKMSQA
Subjt:  MASRFPGASGS--TQVQAKGSGPTRSKNREP---GDPVRD--RVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPA-------EVRLMIQKARLGKKMSQA

Query:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        ELA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRGK  K
Subjt:  ELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

SwissProt top hits

e value

%identity

Alignment

Q5ZMC0 Endothelial differentiation-related factor 1 homolog

5.6e-12

38.58

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Query:  TQVQAKGSGPTRSKNREPGDPVRDR---VQTVKKFDAGSNRKAAAAPVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQE
        T ++ KG    ++K+++     + R   V+T KK+ AG N++      N  KL+  TE       P EV  +IQ+ R  K M+Q +LA +INE+ QV+ +
Subjt:  TQVQAKGSGPTRSKNREPGDPVRDR---VQTVKKFDAGSNRKAAAAPVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQE

Query:  YENGKAVLNQAVLGKIEIVLGVKLRGK
        YE+G+A+ N  V+GKIE  +G+KLRGK
Subjt:  YENGKAVLNQAVLGKIEIVLGVKLRGK

Q6GPQ6 Endothelial differentiation-related factor 1 homolog

2.3e-13

42.06

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Query:  GSTQVQAKGSGPTRSKNREPGDPVRDRVQTVKKFDAGSNRKAAAAPVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEY
        G T  QAK      +  R       + V+T KK+ AG N++      N  KL+  TE       P EV  +IQ+ R GK M+Q +LA +INE+ QV+ +Y
Subjt:  GSTQVQAKGSGPTRSKNREPGDPVRDRVQTVKKFDAGSNRKAAAAPVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEY

Query:  ENGKAVLNQAVLGKIEIVLGVKLRGK
        E GKA+ N  V+GKIE V+G+KLRGK
Subjt:  ENGKAVLNQAVLGKIEIVLGVKLRGK

Q9LV58 Multiprotein-bridging factor 1c

1.5e-28

58.17

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Query:  MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRD------------RVQTVKKFDAGSNR--KAAAAPV-NARKLEEGTEP-------AEVRLMIQKAR
        M SR+PGA     V          K+++    +RD             VQTVKKFDAGSN+  K+ A PV N +KLEE TEP       AEVRLMIQKAR
Subjt:  MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRD------------RVQTVKKFDAGSNR--KAAAAPV-NARKLEEGTEP-------AEVRLMIQKAR

Query:  LGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        L KKMSQA+LA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRGK  K
Subjt:  LGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

Q9LXT3 Multiprotein-bridging factor 1b

9.8e-17

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Query:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK
        ++TV+KF+AGSN+ A++   +N +KL++ TE       P E++  I +AR  KK++Q++LA+ INE+ QV+QEYE+GKA+ NQ +L K+E  LG KLRGK
Subjt:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK

Q9SJI8 Multiprotein-bridging factor 1a

6.4e-16

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Query:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK
        ++TV+KF+AG+N+ A++   +N + L++ TE       P E++  I +AR  KK++Q++LA  INE+ QV+QEYE+GKA+ NQ +L K+E  LG KLRGK
Subjt:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK

Arabidopsis top hits

e value

%identity

Alignment

AT2G42680.1 multiprotein bridging factor 1A

4.5e-17

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Query:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK
        ++TV+KF+AG+N+ A++   +N + L++ TE       P E++  I +AR  KK++Q++LA  INE+ QV+QEYE+GKA+ NQ +L K+E  LG KLRGK
Subjt:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK

AT3G24500.1 multiprotein bridging factor 1C

1.0e-29

58.17

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Query:  MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRD------------RVQTVKKFDAGSNR--KAAAAPV-NARKLEEGTEP-------AEVRLMIQKAR
        M SR+PGA     V          K+++    +RD             VQTVKKFDAGSN+  K+ A PV N +KLEE TEP       AEVRLMIQKAR
Subjt:  MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRD------------RVQTVKKFDAGSNR--KAAAAPV-NARKLEEGTEP-------AEVRLMIQKAR

Query:  LGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK
        L KKMSQA+LA QINERTQVVQEYENGKAV NQAVL K+E VLGVKLRGK  K
Subjt:  LGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGKPAK

AT3G24500.2 multiprotein bridging factor 1C

2.0e-04

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Query:  MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRD------------RVQTVKKFDAGSNR--KAAAAPV-NARKLEEGTEP-------AEVRLMIQKAR
        M SR+PGA     V          K+++    +RD             VQTVKKFDAGSN+  K+ A PV N +KLEE TEP       AEVRL +++ R
Subjt:  MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRD------------RVQTVKKFDAGSNR--KAAAAPV-NARKLEEGTEP-------AEVRLMIQKAR

AT3G58680.1 multiprotein bridging factor 1B

7.0e-18

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Query:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK
        ++TV+KF+AGSN+ A++   +N +KL++ TE       P E++  I +AR  KK++Q++LA+ INE+ QV+QEYE+GKA+ NQ +L K+E  LG KLRGK
Subjt:  VQTVKKFDAGSNRKAAA-APVNARKLEEGTE-------PAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLNQAVLGKIEIVLGVKLRGK

Sequences

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CDS sequence

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ATGGCGAGCCGGTTCCCAGGAGCCAGTGGTTCTACACAAGTCCAAGCCAAAGGCTCAGGACCTACGCGATCCAAAAACCGTGAACCAGGCGATCCGGTCAGGGATAGAGT
CCAGACCGTGAAGAAGTTCGACGCCGGTTCGAACAGGAAAGCCGCGGCGGCGCCGGTGAACGCCAGGAAGCTGGAGGAAGGCACCGAGCCGGCGGAGGTGAGGCTGATGA
TCCAGAAGGCTCGGCTTGGGAAGAAGATGAGCCAAGCCGAGCTGGCGAATCAGATCAACGAGCGGACCCAGGTGGTTCAGGAGTATGAGAATGGGAAGGCTGTGCTGAAC
CAGGCCGTTTTGGGTAAGATCGAGATAGTTTTGGGCGTTAAACTTCGGGGTAAACCGGCCAAGTGA

mRNA sequence

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Protein sequence

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MASRFPGASGSTQVQAKGSGPTRSKNREPGDPVRDRVQTVKKFDAGSNRKAAAAPVNARKLEEGTEPAEVRLMIQKARLGKKMSQAELANQINERTQVVQEYENGKAVLN
QAVLGKIEIVLGVKLRGKPAK

Sed0005088 (gene) of Chayote v1 genome