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Sed0005090 (gene) of Chayote v1 genome

Gene IDSed0005090
OrganismSechium edule (Chayote v1)
DescriptionSenescence-associated gene 21, putative
Genome locationLG04:37144790..37145823
RNA-Seq ExpressionSed0005090
SyntenySed0005090
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY25450.1 Senescence-associated gene 21, putative [Theobroma cacao]4.5e-1349.45Show/hide
Query:  MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKK
        MA+++  SF  +SRR S +VA + +K Q    V+R       T  R ++ A + +TFWM+DPK+GNWIPENHF DIDVAELR K L K +K
Subjt:  MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKK

KAA0059359.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa]1.8e-1765.79Show/hide
Query:  LSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK
        +SSS+A++QLKAQ T   VVRK+KA  ETS  D+    + KTFWMKDPKSGNWIPENHF++IDV ELR KLL K K
Subjt:  LSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK

KAE8646489.1 hypothetical protein Csa_015817 [Cucumis sativus]5.5e-1965.82Show/hide
Query:  LSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKLI
        +SSSVA++QLKAQ T   VVRK+KA  ET G D+    + KTFWMKDPKSGNWIPENHF+++DV ELR KLL K KKL+
Subjt:  LSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKLI

KAG6575415.1 hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2470.21Show/hide
Query:  MAKVTGNSFYFISRRLSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKT-FWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKL
        MAK+TGN  YFI RRLSS VA++QLKA+ T P  V+ + A  ETSG DDI AVE K  FWMKDPKSGNWIPENHF +IDV ELR KLL KTKKL
Subjt:  MAKVTGNSFYFISRRLSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKT-FWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKL

XP_022720742.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Durio zibethinus]1.5e-1357.89Show/hide
Query:  RLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK
        R S + A + +K Q    V++K     ET  RD+I+A E +TFWMKDPK+GNWIPENHFDDIDVAELR K+LPK +
Subjt:  RLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK

TrEMBL top hitse value%identityAlignment
A0A061G6G1 Senescence-associated gene 21, putative2.2e-1349.45Show/hide
Query:  MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKK
        MA+++  SF  +SRR S +VA + +K Q    V+R       T  R ++ A + +TFWM+DPK+GNWIPENHF DIDVAELR K L K +K
Subjt:  MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKK

A0A0A0K7L4 Uncharacterized protein1.5e-2569.15Show/hide
Query:  MAKVTGNSFYFISRRLSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKLI
        MAKVTGNS YFI RR+SSSVA++QLKAQ T   VVRK+KA  ET G D+    + KTFWMKDPKSGNWIPENHF+++DV ELR KLL K KKL+
Subjt:  MAKVTGNSFYFISRRLSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKLI

A0A5D3BWU2 Putative Senescence-associated protein 218.6e-1865.79Show/hide
Query:  LSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK
        +SSS+A++QLKAQ T   VVRK+KA  ETS  D+    + KTFWMKDPKSGNWIPENHF++IDV ELR KLL K K
Subjt:  LSSSVATKQLKAQ-TGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK

A0A6P5WYX6 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like7.5e-1457.89Show/hide
Query:  RLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK
        R S + A + +K Q    V++K     ET  RD+I+A E +TFWMKDPK+GNWIPENHFDDIDVAELR K+LPK +
Subjt:  RLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTK

A0A7J7CEE5 Putative Senescence-associated212.2e-1348.35Show/hide
Query:  MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKK
        MAK+  N F+FI R  S SVA + ++ Q  P  +RK+  +         TA   + +WMKDPK+GNW+PE+HFD++DVAELR KLLPK  K
Subjt:  MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02380.1 senescence-associated gene 215.3e-0433.73Show/hide
Query:  FISRRLSSSV-------ATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLL
        F+SR LS+++          Q    +G        AV +  G ++ T    K  W+ DPK+G + PE   ++ID AELRA LL
Subjt:  FISRRLSSSV-------ATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGTTACTGGGAATAGTTTTTACTTCATAAGCAGGCGACTAAGCTCTTCGGTTGCAACCAAGCAACTGAAAGCACAAACAGGGCCGGAGGTGGTGAGGAAGAT
GAAGGCAGTCACGGAAACAAGCGGTCGGGATGATATTACGGCAGTTGAACCGAAGACATTTTGGATGAAGGATCCCAAGAGTGGAAACTGGATTCCTGAGAACCACTTTG
ATGATATTGATGTGGCTGAGTTGAGGGCCAAACTGCTGCCTAAAACTAAGAAGCTGATATAA
mRNA sequenceShow/hide mRNA sequence
CTTAGATTGCTTATATATGTGTGCAATTGTTCAAACTTTCCATTCAAAGCCAAACATAGAAAACTCCCTCTTTTTTCTCTAGACATGGCTAAAGTTACTGGGAATAGTTT
TTACTTCATAAGCAGGCGACTAAGCTCTTCGGTTGCAACCAAGCAACTGAAAGCACAAACAGGGCCGGAGGTGGTGAGGAAGATGAAGGCAGTCACGGAAACAAGCGGTC
GGGATGATATTACGGCAGTTGAACCGAAGACATTTTGGATGAAGGATCCCAAGAGTGGAAACTGGATTCCTGAGAACCACTTTGATGATATTGATGTGGCTGAGTTGAGG
GCCAAACTGCTGCCTAAAACTAAGAAGCTGATATAAAACATGAAACCTTTCAGCTTTGTTGTGTGCATCAATAATATAATTATTCTCCGTGCTACTGCTGCTAAAACTAT
TGAGCAAGACTTTCTCTTTCTATCTTTCTCAATAATTTGTCACTTTCATCGATTTGAAAGGCCAATAAGAACAATACCTCAACACTGACATAAGTGTATATCCGTGATCA
AGGGATCGTGGGTTCGAATCTTCCGACCCCTAATTGTTATTAAATTTAAAAAGAAATACTTGATGAATCCTCTCTAAGTTTAATGAGGGTGATCTTGACAGATGACAGAA
AGGAATCAGAATCTCATAAAGTTTATCAATGAAAGCAAACAATCAGATCAGTAGTTGAACAAGTCAAGTCTGTTGAGTTGGAGTATTGAAGTTATATCACAACTATTAAC
TTAATATGGACAATTTATCCCAATGTTTGTATATTTACTTAATTTTTAGTATTATTGTTAAGAAGGGACCATTCTAATGACAAATCACATCATTCCCGTTCCTTCTAATG
AGGGACAGAGAAGGGAAAGAGATACCACTCTCTTTTTTGAGAAGGGACCATAATAAAT
Protein sequenceShow/hide protein sequence
MAKVTGNSFYFISRRLSSSVATKQLKAQTGPEVVRKMKAVTETSGRDDITAVEPKTFWMKDPKSGNWIPENHFDDIDVAELRAKLLPKTKKLI