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Sed0005091 (gene) of Chayote v1 genome

Gene IDSed0005091
OrganismSechium edule (Chayote v1)
DescriptionIntraflagellar transport protein
Genome locationLG13:22299035..22300690
RNA-Seq ExpressionSed0005091
SyntenySed0005091
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608487.1 hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5682.47Show/hide
Query:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL
        MPQRDWHKN K KEN      I AWNVFDNVKTTTKTPEAL+AEIN AI+NLEYAR+TA+LESP+SP P QDRSSGA+S  TQYD R+ADEAYKAGCAAL
Subjt:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        AVGKLDEAL SLNVSLSKCPPEKS+AVAKLQSLISLTSQQLQ+RSSN +EISED
Subjt:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

KAG7037814.1 hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-5082.73Show/hide
Query:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL
        MPQRDWHKN K KEN      I AWNVFDNVKTTTKTPEAL+AEIN AI+NLEYAR+TA+LESP+SP P QDRSSGA+S  TQYD R+ADEAYKAGCAAL
Subjt:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQ
        AVGKLDEAL SLNVSLSKCPPEKS+AVAKLQSLISLTSQ
Subjt:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQ

XP_011654103.1 uncharacterized protein LOC101212714 [Cucumis sativus]8.5e-4974.51Show/hide
Query:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA
        MPQR+ HK+ + +    E  I AWNVFD+VKTTTKTPEALM EI AAISNLEYARTTA+LESP+SP+  +D    A S R+QYDVRMAD AYKAGC AL 
Subjt:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        VGKLDEAL SLNVSLSKCPPEKS+AVAK+QSLISLTSQQLQ+RSSN  EISED
Subjt:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

XP_022940904.1 uncharacterized protein LOC111446352 [Cucurbita moschata]2.1e-5581.17Show/hide
Query:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL
        MPQRDWHKN K KEN      I AWNVFDNVKTTTKTPEAL+AEIN AI+NLEYAR+TA+LESP+SP P QDRSSG +S  TQYD R+ADEAYKAGCAAL
Subjt:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        AVGKLDEAL SLNVSLSKCPPEKS+AVAKLQSLISLTS+QLQ+RSSN +EISED
Subjt:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

XP_038899466.1 uncharacterized protein LOC120086752 [Benincasa hispida]2.3e-5480.52Show/hide
Query:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL
        MPQRDWHKNLKE EN      I AWNVFDNVKTTTKTPEALMAEINAAISN EYARTTA L+SP+SP+  +D  S +ASLRTQY VRMAD +YKAGCAA 
Subjt:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
         VGKLDEAL SLNVSLSKCPPEKS+AVAKLQSLISLTS QLQ+RSSNS EISED
Subjt:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

TrEMBL top hitse value%identityAlignment
A0A0A0L090 Uncharacterized protein4.1e-4974.51Show/hide
Query:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA
        MPQR+ HK+ + +    E  I AWNVFD+VKTTTKTPEALM EI AAISNLEYARTTA+LESP+SP+  +D    A S R+QYDVRMAD AYKAGC AL 
Subjt:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        VGKLDEAL SLNVSLSKCPPEKS+AVAK+QSLISLTSQQLQ+RSSN  EISED
Subjt:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

A0A1S3BU07 uncharacterized protein LOC1034935313.9e-4771.24Show/hide
Query:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA
        M QR+WHK+   +    E  I  WNVFDNVKTTTKTPEALMAEINAAISNLEY RT A+LESP+SP    +    +A+ R+QYDVR+AD AYKAGC AL 
Subjt:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        +GKLDEAL SLNVSLSKCPPEKS+AVAK+QSLISLTSQQ+Q+RSSN  EISED
Subjt:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

A0A5A7VF87 Uncharacterized protein3.9e-4771.24Show/hide
Query:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA
        M QR+WHK+   +    E  I  WNVFDNVKTTTKTPEALMAEINAAISNLEY RT A+LESP+SP    +    +A+ R+QYDVR+AD AYKAGC AL 
Subjt:  MPQRDWHKNLKEK----ENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        +GKLDEAL SLNVSLSKCPPEKS+AVAK+QSLISLTSQQ+Q+RSSN  EISED
Subjt:  VGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

A0A6J1BP49 uncharacterized protein LOC1110261686.1e-4574.03Show/hide
Query:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL
        MP RD  KN KE+EN      I+AWN FDNV  TTKTPEALMAEINAAIS +EYARTTA LES  +P   QD  SG ASL  QYD RMADEAYKAGCAAL
Subjt:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        AVGKLD+AL SLNVSLSKCPPEK++AVAKL SLI+LTSQQL  RSSN +EISED
Subjt:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

A0A6J1FLM9 uncharacterized protein LOC1114463521.0e-5581.17Show/hide
Query:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL
        MPQRDWHKN K KEN      I AWNVFDNVKTTTKTPEAL+AEIN AI+NLEYAR+TA+LESP+SP P QDRSSG +S  TQYD R+ADEAYKAGCAAL
Subjt:  MPQRDWHKNLKEKENT-----IVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED
        AVGKLDEAL SLNVSLSKCPPEKS+AVAKLQSLISLTS+QLQ+RSSN +EISED
Subjt:  AVGKLDEALLSLNVSLSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAACGAGACTGGCATAAGAATCTGAAAGAAAAGGAGAACACAATTGTCGCATGGAATGTGTTTGACAATGTGAAGACGACAACGAAGACGCCTGAAGCTCTAAT
GGCGGAGATCAATGCTGCAATTTCAAATCTGGAATATGCTCGAACCACAGCTTGGCTAGAGTCTCCAATGTCTCCCAATCCAGTACAAGATAGGAGCTCTGGTGCTGCGA
GCTTAAGAACTCAGTATGATGTTCGAATGGCGGACGAAGCATATAAGGCAGGCTGTGCAGCATTGGCTGTTGGTAAACTTGATGAGGCTCTTCTTTCGTTGAACGTTTCT
CTTTCAAAATGCCCGCCCGAGAAATCCGCTGCTGTTGCTAAGCTTCAGTCTCTTATATCTTTGACATCCCAGCAACTCCAGGTTAGATCTTCCAATTCTAATGAAATTTC
TGAAGATCGATCAGTTTTTGGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
CATAAAGCTCACAATCCTCGCCAGGGCTGAAACTTCAAAAAAGTTCATCTTCAAAGAAGCAGTTCATCGCAATCAGCTTCAAGTTCGAGGCATCAACGAAACCAATTTTC
GTGATTTCTTGTGCGGTGAATCGGTAGGTGCCGCTTCTTTCCCATTTTCGTTCTTCTTGAGACGATAGAAGAGATCGATTCTGCATTTGCAGAGCGATCAGAACTCAGTT
AAGGATCGATTTGATTCAATTACTTCGCCATTTGTTTCTGACTTTGATTTCTTAGAGCCGCTTTCGCAATTGCATGTTTATTTACATTGATTTTTGCGTTTTCTTGAGAG
CTGATTTCATTGTTATCCAATATTCTCAACTGGATTAGGAATTTCGTGTTAGGATCAGAGAATTGGATTTAACGTAGCGTTTTCAAACCAGAATCGGAGTGGTATTTGAA
GTTCAGTGCAAAGAAAACCAACGAATTCGGTATTTGAGGTTGAGCGCAAGGTGTTTGTGAAAATTCCTCAACGACATTGACATCAGAATCCGAAAGAAAAGGAGAATATA
ATAGCCGCTTGTTATTCAATATTCTCAACTCGGTTCAGAATTGTGTGTTAGGATCAAAGAATCGGATTCAACAGCGTTTTTCAGAGTAAAATAGAAGTTGGGCGCCAAGA
AAACTAATCAAATTTGGTTGAGCGCTAGGTGTTTGTGAAAATGCGTCAACGAGAGTGGCATAAGAATCCGAAAGAAAAGTAGAATACAATCGCTGCTTGTTATGCAATGT
TCTTAACTCGATTCGGAATTTCGTGTTAGGATCAGAGAATCGGATTGGACGTAGTGTTTTCAAAGCAAAATCAAAGTGGTATTTGAAGTTTAGCGCCAAGAAAACTGACC
AATTTGGTTGAACGCAAGGTGTTTGTGAAAATGCCTCAACGAGACTGGCATAAGAATCTGAAAGAAAAGGAGAACACAATTGTCGCATGGAATGTGTTTGACAATGTGAA
GACGACAACGAAGACGCCTGAAGCTCTAATGGCGGAGATCAATGCTGCAATTTCAAATCTGGAATATGCTCGAACCACAGCTTGGCTAGAGTCTCCAATGTCTCCCAATC
CAGTACAAGATAGGAGCTCTGGTGCTGCGAGCTTAAGAACTCAGTATGATGTTCGAATGGCGGACGAAGCATATAAGGCAGGCTGTGCAGCATTGGCTGTTGGTAAACTT
GATGAGGCTCTTCTTTCGTTGAACGTTTCTCTTTCAAAATGCCCGCCCGAGAAATCCGCTGCTGTTGCTAAGCTTCAGTCTCTTATATCTTTGACATCCCAGCAACTCCA
GGTTAGATCTTCCAATTCTAATGAAATTTCTGAAGATCGATCAGTTTTTGGCTCTTAACTGTCAAGTTTTCCTGGTTTCTATATGCTTTCTTGATCTTTTCTCCCATAAA
AGTTCATATGTGAATTAAATCCCTCTGGTTGCTCCTCCATCTGTGAATTGAATCCCTTTCACCAAAAAGAAAGTTAAAATTGACTTGTGATGTATATATGATGATATGAT
ACTTAGCAAGTTATTGGAATTTAGGATGAAGAATTATGTATCTAATCCTAATCCGGAAAAGATTTTTTTTGTTTGTTTGATGACCTGAGAACCTGGAGCTTTCCTCTAAA
CCCAAG
Protein sequenceShow/hide protein sequence
MPQRDWHKNLKEKENTIVAWNVFDNVKTTTKTPEALMAEINAAISNLEYARTTAWLESPMSPNPVQDRSSGAASLRTQYDVRMADEAYKAGCAALAVGKLDEALLSLNVS
LSKCPPEKSAAVAKLQSLISLTSQQLQVRSSNSNEISEDRSVFGS