; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005093 (gene) of Chayote v1 genome

Gene IDSed0005093
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG01:23826376..23828513
RNA-Seq ExpressionSed0005093
SyntenySed0005093
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]3.5e-12993.55Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P  GVA NASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP + SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

XP_022133484.1 chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]1.6e-12993.95Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P  GV ANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP + SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

XP_022939932.1 chlorophyll a-b binding protein 6A, chloroplastic-like [Cucurbita moschata]4.1e-13093.95Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA+  +P  GVA NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLGYSKDPVKLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDIIIP S SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

XP_023549541.1 chlorophyll a-b binding protein 6A, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]2.0e-12993.93Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA+  +P  GVA NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLGYSKDPVKLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFS
        LALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDIIIP S S
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFS

XP_038891246.1 chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]1.2e-12994.35Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P  GVA NASSRFSMSAEWMPGQPRPPYLDGS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP S SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

TrEMBL top hitse value%identityAlignment
A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic1.7e-12993.55Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P  GVA NASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP + SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic1.7e-12993.55Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P  GVA NASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP + SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

A0A6J1BW39 Chlorophyll a-b binding protein, chloroplastic7.6e-13093.95Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P  GV ANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP + SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

A0A6J1FI72 Chlorophyll a-b binding protein, chloroplastic2.0e-13093.95Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA+  +P  GVA NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLGYSKDPVKLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDIIIP S SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

A0A6J1JZ33 Chlorophyll a-b binding protein, chloroplastic2.0e-13093.95Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI AT AFPSVLSSSKSKFA+  +P  GVA NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLGYSKDPVKLKEYKVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDIIIP S SP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic8.4e-11885.08Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASNTLMSCGI A    PS LSS+KSKFA AA+P    A N  SRFSMSA+WMPGQPRP YLDGSAPGDFGFD L LGEVP NLER+KESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGI+VPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDP K +E KVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP
        LALLA VG CVQQSAY GTGPLENLATHLADPWHNNIGD+IIP    P
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPPSFSP

Q01667 Chlorophyll a-b binding protein 6, chloroplastic2.4e-11784.77Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASN+LMSCGIA  A +PS+LSSSKSKF SA +P P   A    R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KL+E KVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic4.3e-3740.09Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFV
        E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E DSEK+ YPGG  FDPLG + DP K  + ++ E+K+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFV

Query:  GICVQQSAYPGTGPLENLATHLADPWHNNIGD
        G  VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GICVQQSAYPGTGPLENLATHLADPWHNNIGD

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic6.5e-10274.38Show/hide
Query:  ASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        +S+ L SC   +    PS+L+ S S+   + LPF    A  S R +MSAEW PGQPRP +LDGS+PGDFGFDPL L  VPEN ERFKESE+ HCRWAML 
Subjt:  ASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGRL
        VPG+LVPEALGLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKD EKKKYPGGAFDPLG+SKDP K +E K+KE+KNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGRL

Query:  ALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        A+LAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.5e-3738.81Show/hide
Query:  SVLSSSKSKFASAALPFPGVAAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE---------------------------------
        S +SS+ S+F +A   F    A+   A +  S    W PG   P YLDGS  GD+GFDP  LG+  E                                 
Subjt:  SVLSSSKSKFASAALPFPGVAAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE---------------------------------

Query:  ----------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYP
                   L+RF+E ELIH RWAMLA  G +  E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E DSEK+ YP
Subjt:  ----------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYP

Query:  GGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGD
        GG  FDPLG + DPVK  + ++ E+K+ RLA++ F+G  VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGD

Arabidopsis top hitse value%identityAlignment
AT3G08940.2 light harvesting complex photosystem II1.0e-3838.81Show/hide
Query:  SVLSSSKSKFASAALPFPGVAAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE---------------------------------
        S +SS+ S+F +A   F    A+   A +  S    W PG   P YLDGS  GD+GFDP  LG+  E                                 
Subjt:  SVLSSSKSKFASAALPFPGVAAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE---------------------------------

Query:  ----------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYP
                   L+RF+E ELIH RWAMLA  G +  E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E DSEK+ YP
Subjt:  ----------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYP

Query:  GGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGD
        GG  FDPLG + DPVK  + ++ E+K+ RLA++ F+G  VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGD

AT3G54890.1 photosystem I light harvesting complex gene 11.7e-11884.77Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASN+LMSCGIA  A +PS+LSSSKSKF SA +P P   A    R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KL+E KVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.2 photosystem I light harvesting complex gene 15.1e-9472.02Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASN+LMSCGIA  A +PS+LSSSKSKF SA +P P   A    R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                                  E KVKE+KNGR
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR

Query:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        LALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  LALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.3 photosystem I light harvesting complex gene 16.5e-6580.26Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASN+LMSCGIA  A +PS+LSSSKSKF SA +P P   A    R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA
        AVPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 13.1e-9182Show/hide
Query:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML
        MASN+LMSCGIA  A +PS+LSSSKSKF SA +P P   A    R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAML
Subjt:  MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAML

Query:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR
        AVPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KL+E KVKE+KNG+
Subjt:  AVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATCGCCGCCACCGCCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAATTCGCCTCCGCCGCCCTCCCCTTTCCCGG
TGTCGCCGCCAATGCCTCCTCCCGCTTCTCGATGTCTGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCTTATCTCGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACC
CACTTCGGCTGGGAGAAGTGCCAGAGAATCTGGAGAGATTCAAGGAGTCTGAGCTTATCCATTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCA
TTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGACAGCCAGTTCCATGGGGAACTTTGCCCACCATTTTGGT
CATTGAGTTTCTTGCAATTGCCTTTGTAGAGCACCAACGCAGCATGGAGAAGGACTCGGAGAAGAAGAAGTACCCGGGAGGCGCTTTCGACCCATTGGGCTACTCGAAAG
ACCCTGTCAAGTTGAAGGAATACAAAGTCAAAGAGGTCAAAAATGGTCGGTTGGCATTGTTGGCTTTTGTTGGAATCTGTGTGCAACAATCTGCATACCCAGGAACAGGG
CCATTGGAGAACTTGGCAACTCACTTGGCTGATCCATGGCACAACAACATTGGCGACATCATCATTCCCCCATCGTTTTCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTGAAATTTGAGGTGAACAATCTCCACCACGGAATTGGAAGATATGGATATTCCACAGGGGCCAATGAAATGAGAGAGGGAAGCCACATTTATCCAATGAAAATCAAGCT
TTAGATTTCCCAATCTGTTGGTTCCAACTGCTTTTAGTCTCCTTCTTCTTCTTCTTCCCACTCTCCATCTCAACCTCTCATTCCCATTGCTCTTCAATGGCTTCCAACAC
CTTGATGAGCTGCGGCATCGCCGCCACCGCCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAATTCGCCTCCGCCGCCCTCCCCTTTCCCGGTGTCGCCGCCAATG
CCTCCTCCCGCTTCTCGATGTCTGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCTTATCTCGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCACTTCGGCTGGGA
GAAGTGCCAGAGAATCTGGAGAGATTCAAGGAGTCTGAGCTTATCCATTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGATTGGGCAA
CTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGACAGCCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTTCTTG
CAATTGCCTTTGTAGAGCACCAACGCAGCATGGAGAAGGACTCGGAGAAGAAGAAGTACCCGGGAGGCGCTTTCGACCCATTGGGCTACTCGAAAGACCCTGTCAAGTTG
AAGGAATACAAAGTCAAAGAGGTCAAAAATGGTCGGTTGGCATTGTTGGCTTTTGTTGGAATCTGTGTGCAACAATCTGCATACCCAGGAACAGGGCCATTGGAGAACTT
GGCAACTCACTTGGCTGATCCATGGCACAACAACATTGGCGACATCATCATTCCCCCATCGTTTTCGCCTTGAATTTTGCTCTAAATCATACTCTCATTGTAATTAAACT
TCTCTGTGTCTGAATTTGAACTCCATTGTTGCCCTCTCTTTGTGGCTTTCATTGTGCTATGTATCTCGATTATTCACCTTCATTTTAGTGCATGAAGTTATCATTGGAGG
AAAAACGAATCATCATTCAGTTTAAAGTTTCATTATTTGCTTTATCTTAATGTTTATCTTAATGGTGAGGAAACAAAATTGTCTCACATGGCTAAGACAAGAGAAAGATT
TTGTGTGTATAAGGGGGATAGCAC
Protein sequenceShow/hide protein sequence
MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEA
LGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTG
PLENLATHLADPWHNNIGDIIIPPSFSP