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Sed0005097 (gene) of Chayote v1 genome

Gene IDSed0005097
OrganismSechium edule (Chayote v1)
DescriptionDUF4408 domain-containing protein
Genome locationLG09:3333834..3334643
RNA-Seq ExpressionSed0005097
SyntenySed0005097
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR025520 - Domain of unknown function DUF4408


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039829.1 DUF4408 domain-containing protein [Cucumis melo var. makuwa]4.9e-4158.16Show/hide
Query:  LNVEKLFAIKYCYKTSQLLFLYNLTL--NSLIIFIFGLWL-SSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM
        +N EKLFAIKYCYK SQ LFLYNL L  + +IIF F  WL SSQS+ FPP ++ S+I++V+TPP  FSP CLFV+VN IV+YIVGEQKL  AK + +N M
Subjt:  LNVEKLFAIKYCYKTSQLLFLYNLTL--NSLIIFIFGLWL-SSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM

Query:  YDEYNVERIEEIDN-MSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCF
        YDEY +ER  E+ + ++  +N+ QLVEK VEEKEEE I ++    D D      ++E+E     D   AN+E N+RAEAFIARVNKQRKLEAVDCF
Subjt:  YDEYNVERIEEIDN-MSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCF

KAE8646757.1 hypothetical protein Csa_004884 [Cucumis sativus]3.1e-4057.81Show/hide
Query:  LNVEKLFAIKYCYKTSQLLFLYNLTL-NSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRMYD
        +N EKLFAIKYCYK SQ LFLYNL + +SLI   F  WLSSQS+ FPP ++ S+I+MV TPP  FSP CLFV+VN IV+YIVGEQKL  AK + +N MYD
Subjt:  LNVEKLFAIKYCYKTSQLLFLYNLTL-NSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRMYD

Query:  EYNVERIEEIDNMSHGDNVSQL-VEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVD
        EY +ER  E+  ++  +N+ +L VEK VEEKEEE I  +         + N     E E+  D  LAN+E N+RAEAFIARVNKQRKLEAVD
Subjt:  EYNVERIEEIDNMSHGDNVSQL-VEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVD

KAF5952791.1 hypothetical protein HYC85_010735 [Camellia sinensis]1.3e-0938.19Show/hide
Query:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM
        M ++  EKL A+K  +K  Q  FL NL L+SL    F L L S  + FP   L S ++  V+    F+P+CLFVV N I++++VGE KL  ++ S    M
Subjt:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM

Query:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC
          +    ++E         N+S+     +EE+EEE +      DD      N  NKE E+ DE+  +  L  +EFN+R E FIA+VNKQR LEA  +DC
Subjt:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC

XP_028076840.1 uncharacterized protein LOC114278877 [Camellia sinensis]1.3e-0938.19Show/hide
Query:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM
        M ++  EKL A+K  +K  Q  FL NL L+SL    F L L S  + FP   L S ++  V+    F+P+CLFVV N I++++VGE KL  ++ S    M
Subjt:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM

Query:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC
          +    ++E         N+S+     +EE+EEE +      DD      N  NKE E+ DE+  +  L  +EFN+R E FIA+VNKQR LEA  +DC
Subjt:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC

XP_038875115.1 uncharacterized protein LOC120067646 [Benincasa hispida]1.5e-4261.14Show/hide
Query:  LNVEKLFAIKYCYKTSQLLFLYNLTL-NSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAK-VSLVNRMY
        ++ EKLFAIKYCYK SQ LFLYNL L +SLIIF F  WLSSQ + FPP +L SMI MVV PP  FSP C FV+VN IV+YIVGEQKL  A+  S++N+MY
Subjt:  LNVEKLFAIKYCYKTSQLLFLYNLTL-NSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAK-VSLVNRMY

Query:  DEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDC
        DEY + +  E+ NM+  +N+ QLVEKVVEEKEEE +  V    D DG + +++ E E     D  LAN+E N+RAEAFIARVNKQRKLEAVDC
Subjt:  DEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDC

TrEMBL top hitse value%identityAlignment
A0A0A0K9L0 DUF4408 domain-containing protein2.8e-4258.25Show/hide
Query:  LNVEKLFAIKYCYKTSQLLFLYNLTL-NSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRMYD
        +N EKLFAIKYCYK SQ LFLYNL + +SLI   F  WLSSQS+ FPP ++ S+I+MV TPP  FSP CLFV+VN IV+YIVGEQKL  AK + +N MYD
Subjt:  LNVEKLFAIKYCYKTSQLLFLYNLTL-NSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRMYD

Query:  EYNVERIEEIDNMSHGDNVSQL-VEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCF
        EY +ER  E+  ++  +N+ +L VEK VEEKEEE I  +         + N     E E+  D  LAN+E N+RAEAFIARVNKQRKLEAVDCF
Subjt:  EYNVERIEEIDNMSHGDNVSQL-VEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCF

A0A2G5E5N9 DUF4408 domain-containing protein6.2e-1034.72Show/hide
Query:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTP---PPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLV
        M ++  EKL A+   YK +Q  FL NL L SLI+    L+ SS   L P YS + +   V  P     I SP+CLF++ N+IV+ ++GE KL+ +K S  
Subjt:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTP---PPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLV

Query:  NRMYDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVI-------------------DTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEA
          +YDEY    +    ++    N + LV+K  +  +EEVI                   + V  +    G +K  + ++ + D    VL  +E NRR E 
Subjt:  NRMYDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVI-------------------DTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEA

Query:  FIARVNKQRKLEAVDC
        FIAR+NKQR+LEA+ C
Subjt:  FIARVNKQRKLEAVDC

A0A4S4E5F7 DUF4408 domain-containing protein6.2e-1038.19Show/hide
Query:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM
        M ++  EKL A+K  +K  Q  FL NL L+SL    F L L S  + FP   L S ++  V+    F+P+CLFVV N I++++VGE KL  ++ S    M
Subjt:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM

Query:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC
          +    ++E         N+S+     +EE+EEE +      DD      N  NKE E+ DE+  +  L  +EFN+R E FIA+VNKQR LEA  +DC
Subjt:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC

A0A5D3DN17 DUF4408 domain-containing protein2.4e-4158.16Show/hide
Query:  LNVEKLFAIKYCYKTSQLLFLYNLTL--NSLIIFIFGLWL-SSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM
        +N EKLFAIKYCYK SQ LFLYNL L  + +IIF F  WL SSQS+ FPP ++ S+I++V+TPP  FSP CLFV+VN IV+YIVGEQKL  AK + +N M
Subjt:  LNVEKLFAIKYCYKTSQLLFLYNLTL--NSLIIFIFGLWL-SSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM

Query:  YDEYNVERIEEIDN-MSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCF
        YDEY +ER  E+ + ++  +N+ QLVEK VEEKEEE I ++    D D      ++E+E     D   AN+E N+RAEAFIARVNKQRKLEAVDCF
Subjt:  YDEYNVERIEEIDN-MSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCF

A0A7J7HKM5 DUF4408 domain-containing protein6.2e-1038.19Show/hide
Query:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM
        M ++  EKL A+K  +K  Q  FL NL L+SL    F L L S  + FP   L S ++  V+    F+P+CLFVV N I++++VGE KL  ++ S    M
Subjt:  MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRM

Query:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC
          +    ++E         N+S+     +EE+EEE +      DD      N  NKE E+ DE+  +  L  +EFN+R E FIA+VNKQR LEA  +DC
Subjt:  YDEYNVERIEEIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDD---ADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEA--VDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAACCTCAATGTAGAGAAGCTTTTTGCTATAAAATATTGCTACAAAACAAGCCAACTACTCTTCCTCTACAATCTCACTCTTAACTCTCTCATCATCTTCATCTT
TGGCTTATGGCTTTCTTCCCAATCTAATCTATTTCCACCCTATTCGCTTCTTTCGATGATCGAAATGGTGGTTACACCGCCCCCGATTTTCAGCCCGAGATGCTTGTTTG
TTGTCGTCAATGTCATTGTTCTCTATATCGTTGGAGAACAAAAGCTCATCGATGCAAAAGTGTCTTTGGTGAATCGGATGTATGATGAATACAATGTCGAGAGGATAGAA
GAGATAGACAATATGAGTCATGGTGACAATGTGAGCCAATTGGTTGAGAAAGTTGTGGAAGAAAAAGAAGAGGAAGTTATCGACACCGTCGTTGCCCTAGACGATGCGGA
TGGGAATGAAAAGAATAAGGAAAGAGAAGACGAAGACGAAGACAATTACGATTACGTGTTGGCCAATAAAGAGTTCAACAGAAGGGCAGAAGCCTTCATTGCAAGAGTTA
ACAAGCAAAGGAAGCTTGAAGCTGTGGATTGTTTTCAATATTGA
mRNA sequenceShow/hide mRNA sequence
AATAGATTCTTTGGAACCAAAGTCTTATTTTCTCCAAAATTTTCCCTCACAAAACTTTCCAAAGTAAGAAAGTGTCCAAAACTAACAAAAGGAGAAGAAAAAAAGAACCC
TAAAAATGTATAACCTCAATGTAGAGAAGCTTTTTGCTATAAAATATTGCTACAAAACAAGCCAACTACTCTTCCTCTACAATCTCACTCTTAACTCTCTCATCATCTTC
ATCTTTGGCTTATGGCTTTCTTCCCAATCTAATCTATTTCCACCCTATTCGCTTCTTTCGATGATCGAAATGGTGGTTACACCGCCCCCGATTTTCAGCCCGAGATGCTT
GTTTGTTGTCGTCAATGTCATTGTTCTCTATATCGTTGGAGAACAAAAGCTCATCGATGCAAAAGTGTCTTTGGTGAATCGGATGTATGATGAATACAATGTCGAGAGGA
TAGAAGAGATAGACAATATGAGTCATGGTGACAATGTGAGCCAATTGGTTGAGAAAGTTGTGGAAGAAAAAGAAGAGGAAGTTATCGACACCGTCGTTGCCCTAGACGAT
GCGGATGGGAATGAAAAGAATAAGGAAAGAGAAGACGAAGACGAAGACAATTACGATTACGTGTTGGCCAATAAAGAGTTCAACAGAAGGGCAGAAGCCTTCATTGCAAG
AGTTAACAAGCAAAGGAAGCTTGAAGCTGTGGATTGTTTTCAATATTGATAGAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTCAGTTTGGTGTGATTCAATAATTACGT
GTTTGATCTTATGATATTTGAGATAAGAAAAGTGTCATGG
Protein sequenceShow/hide protein sequence
MYNLNVEKLFAIKYCYKTSQLLFLYNLTLNSLIIFIFGLWLSSQSNLFPPYSLLSMIEMVVTPPPIFSPRCLFVVVNVIVLYIVGEQKLIDAKVSLVNRMYDEYNVERIE
EIDNMSHGDNVSQLVEKVVEEKEEEVIDTVVALDDADGNEKNKEREDEDEDNYDYVLANKEFNRRAEAFIARVNKQRKLEAVDCFQY