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Sed0005131 (gene) of Chayote v1 genome

Gene IDSed0005131
OrganismSechium edule (Chayote v1)
Descriptioncytochrome c oxidase assembly factor 4 homolog, mitochondrial
Genome locationLG04:33135823..33136655
RNA-Seq ExpressionSed0005131
SyntenySed0005131
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153368.1 cytochrome c oxidase assembly factor 4 homolog, mitochondrial isoform X2 [Cucumis sativus]4.0e-2579.45Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG+PPISPENQPPLHRSDAD+ DENVKQLNECS  YLSLQ+CL +TNRNWK+CQ EVQAL+SC+ERRK+G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

XP_008458528.1 PREDICTED: cytochrome c oxidase assembly factor 4 homolog, mitochondrial [Cucumis melo]1.2e-2478.08Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG+PPISPEN+PPLHRSDAD+ DENVKQLNECS  YLSLQ+CL +TNRNWK+CQ EVQAL+SC+ERRK+G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

XP_011656645.1 uncharacterized protein LOC101215408 isoform X1 [Cucumis sativus]9.9e-2478.38Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQP-EVQALRSCNERRKTGKDK
        MG+PPISPENQPPLHRSDAD+ DENVKQLNECS  YLSLQ+CL +TNRNWK+CQ  EVQAL+SC+ERRK+G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQP-EVQALRSCNERRKTGKDK

XP_022958916.1 uncharacterized protein LOC111460064 [Cucurbita moschata]2.6e-2480.82Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG PPISPENQPPLH SDAD  DENVKQLNECS  YLSLQECL +TNRNWK CQ EVQAL++CNERRKTG  K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

XP_038874602.1 uncharacterized protein LOC120067191 [Benincasa hispida]7.6e-2478.08Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG+PP SPENQPPLHRSDA++ DENVKQLNECS  YLSLQ+CL +TNRNWKACQ EVQAL+SC+ERRK G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

TrEMBL top hitse value%identityAlignment
A0A0A0KEH3 Uncharacterized protein2.0e-2579.45Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG+PPISPENQPPLHRSDAD+ DENVKQLNECS  YLSLQ+CL +TNRNWK+CQ EVQAL+SC+ERRK+G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

A0A1S3C8M5 cytochrome c oxidase assembly factor 4 homolog, mitochondrial5.7e-2578.08Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG+PPISPEN+PPLHRSDAD+ DENVKQLNECS  YLSLQ+CL +TNRNWK+CQ EVQAL+SC+ERRK+G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

A0A5A7SQI1 Cytochrome c oxidase assembly factor 4-like protein5.7e-2578.08Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG+PPISPEN+PPLHRSDAD+ DENVKQLNECS  YLSLQ+CL +TNRNWK+CQ EVQAL+SC+ERRK+G+ K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

A0A6J1H3G8 uncharacterized protein LOC1114600641.3e-2480.82Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG PPISPENQPPLH SDAD  DENVKQLNECS  YLSLQECL +TNRNWK CQ EVQAL++CNERRKTG  K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

A0A6J1L1R2 uncharacterized protein LOC1114990621.3e-2480.82Show/hide
Query:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK
        MG PPISPENQPPLH SDAD  DENVKQLNECS  YLSLQECL +TNRNWK CQ EVQAL++CNERRKTG  K
Subjt:  MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18920.1 Cox19-like CHCH family protein2.5e-1767.86Show/hide
Query:  PPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERR
        PP H+ DAD+ DENVKQL ECS LYLSLQ+CL ++NR+WK+CQ  VQAL+ C+ERR
Subjt:  PPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAACCGCCGATTTCACCGGAGAATCAGCCACCTCTTCACCGGAGCGACGCCGACGAAGCCGACGAGAACGTCAAACAGCTTAATGAATGCTCAGTACTCTACTT
ATCGTTACAGGAATGCCTCAACGAAACTAACAGGAACTGGAAAGCTTGCCAACCTGAAGTTCAAGCTTTGAGGTCTTGCAATGAGAGAAGGAAGACTGGTAAAGACAAGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAACCGCCGATTTCACCGGAGAATCAGCCACCTCTTCACCGGAGCGACGCCGACGAAGCCGACGAGAACGTCAAACAGCTTAATGAATGCTCAGTACTCTACTT
ATCGTTACAGGAATGCCTCAACGAAACTAACAGGAACTGGAAAGCTTGCCAACCTGAAGTTCAAGCTTTGAGGTCTTGCAATGAGAGAAGGAAGACTGGTAAAGACAAGT
GA
Protein sequenceShow/hide protein sequence
MGEPPISPENQPPLHRSDADEADENVKQLNECSVLYLSLQECLNETNRNWKACQPEVQALRSCNERRKTGKDK