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Sed0005149 (gene) of Chayote v1 genome

Gene IDSed0005149
OrganismSechium edule (Chayote v1)
Descriptionprotein NIM1-INTERACTING 2
Genome locationLG06:43198814..43199678
RNA-Seq ExpressionSed0005149
SyntenySed0005149
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573971.1 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3362.89Show/hide
Query:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED
        MPFELFP+S+ TDRGKRKRE    AD+  +AAAGNQK+  A+   E   T+D+EV+EFFAILKRLH+ATK IEKIDGA SLLM KR+K A ASE+E D  
Subjt:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED

Query:  EIKAER---RNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        EI+ +R   + LDR+L  +L+LDLNLEP SVESD   R SR+ NLK L  DSAADS RK
Subjt:  EIKAER---RNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

KGN52074.1 hypothetical protein Csa_008594 [Cucumis sativus]9.3e-3261.44Show/hide
Query:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK
        MPFELFPAS+ST+RGKRKR +D     A  GNQK   A+E +EA   TD+EV+EFF+ILKRLH+ATK IEKIDGAS LLM KR K   ++EEE DE  IK
Subjt:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK

Query:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        AER   ++ L RNL+LDLNLEPV VES+   R     N KP  +DSAADS RK
Subjt:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

XP_022944860.1 uncharacterized protein LOC111449260 [Cucurbita moschata]4.9e-3362.89Show/hide
Query:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED
        MPFELFP+S+ TDRGKRKRE    AD+  +AAAGNQK+  A+   E   T+D+EV+EFFAILKRLH+ATK IEKIDGA SLLM KR+K A ASE+E D  
Subjt:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED

Query:  EIKAER---RNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        EI+ +R   + LDR+L  +L+LDLNLEP SVESD   R SR+ NLK L  DSAADS RK
Subjt:  EIKAER---RNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

XP_023542001.1 uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo]2.9e-3363.46Show/hide
Query:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED
        MPFELFP+S+ TDRGKRKRE    AD+  +AAAGNQK+  A+   E   T+D+EV+EFFAILKRLH+ATK IEKIDGA SLLM KR+K A ASE+E D  
Subjt:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED

Query:  EIKAERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        EI+  +R  D+ L RNL+LDLNLEP  VESD   R SR+ NLK L  DSAADS RK
Subjt:  EIKAERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

XP_038892789.1 protein NIM1-INTERACTING 2 [Benincasa hispida]1.1e-3565.36Show/hide
Query:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK
        MPFELFPAS+STDRGKRKRE+D     A  G+Q+   AD  KEA   TD+EV+EFF+ILKRLH+ATK IEKIDGAS LLM KRSK   +SEEEADE EI+
Subjt:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK

Query:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        AE+   D  L RNL+LDLNLEP  VESDD  + SR+ NLK    DSAADS RK
Subjt:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

TrEMBL top hitse value%identityAlignment
A0A0A0KT67 Uncharacterized protein4.5e-3261.44Show/hide
Query:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK
        MPFELFPAS+ST+RGKRKR +D     A  GNQK   A+E +EA   TD+EV+EFF+ILKRLH+ATK IEKIDGAS LLM KR K   ++EEE DE  IK
Subjt:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK

Query:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        AER   ++ L RNL+LDLNLEPV VES+   R     N KP  +DSAADS RK
Subjt:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

A0A1S3BFE7 protein NIM1-INTERACTING 27.7e-3262.09Show/hide
Query:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK
        MPFELFP S+STDRGKRKR +D     A AGNQK     E KEA   TD+EV+EFF+ILKRLH+ATK IEKIDGAS LLM KRSK   ++EEE DE  I+
Subjt:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK

Query:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
         ER   ++ L RNL+LDLNLEPV VES+   R S+  NLKP  +DSAA S RK
Subjt:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

A0A5A7SZN6 Protein NIM1-INTERACTING 27.7e-3262.09Show/hide
Query:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK
        MPFELFP S+STDRGKRKR +D     A AGNQK     E KEA   TD+EV+EFF+ILKRLH+ATK IEKIDGAS LLM KRSK   ++EEE DE  I+
Subjt:  MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIK

Query:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
         ER   ++ L RNL+LDLNLEPV VES+   R S+  NLKP  +DSAA S RK
Subjt:  AERRNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

A0A6J1FZ89 uncharacterized protein LOC1114492602.4e-3362.89Show/hide
Query:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED
        MPFELFP+S+ TDRGKRKRE    AD+  +AAAGNQK+  A+   E   T+D+EV+EFFAILKRLH+ATK IEKIDGA SLLM KR+K A ASE+E D  
Subjt:  MPFELFPASQSTDRGKRKRE--NDADH-GSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADED

Query:  EIKAER---RNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK
        EI+ +R   + LDR+L  +L+LDLNLEP SVESD   R SR+ NLK L  DSAADS RK
Subjt:  EIKAER---RNLDRDLRRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK

A0A6J1HXL3 uncharacterized protein LOC1114675669.1e-2559.7Show/hide
Query:  MPFELFPASQSTDRGKRKREN----DADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADE
        MPFELFP+S++ DRGKRKRE     D +  +A AGNQKK  AD  KE   T+D+EV+EFF ILKRLH+ATK IEKIDGA S LM KR+K A ASE+E D 
Subjt:  MPFELFPASQSTDRGKRKREN----DADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADE

Query:  DEIKAER---RNLDRDLRRNLNLDLNLEPVSVES
         EI+ +R   + LDR+L  +L+LDLNLEP S +S
Subjt:  DEIKAER---RNLDRDLRRNLNLDLNLEPVSVES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTGAGTTGTTTCCGGCGAGTCAGAGTACGGACAGAGGCAAAAGAAAGCGGGAAAACGACGCCGATCACGGTTCCGCCGCCGCCGGAAACCAGAAGAAGCCGGC
GGCGGACGAAGAAAAAGAGGCGAACGCGACGACGGATCAAGAGGTAGATGAATTCTTCGCCATTCTGAAGCGATTACACTCGGCGACCAAAGACATAGAGAAGATCGACG
GTGCGAGCAGCTTGTTGATGGCGAAAAGATCGAAGGCGGCGACGGCGAGCGAGGAAGAAGCCGATGAAGATGAAATTAAGGCAGAGAGAAGAAATTTGGATCGAGATCTG
AGAAGAAATTTGAATCTGGATCTGAACTTAGAACCTGTTTCTGTTGAATCGGATGATACACACAGGATTAGCCGGAATCTCAATCTGAAGCCGTTGTTTATGGATTCCGC
CGCCGATTCTGGTCGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
CTTAATCCCATTATTATCATACTCTGTTTGGTAAGAAAATTCTACGCTCACTCAAAAGCCTGAAAAGATTCTATCCCACAGCGCACTGACCACTAAGAAACGATGCCGTT
TGAGTTGTTTCCGGCGAGTCAGAGTACGGACAGAGGCAAAAGAAAGCGGGAAAACGACGCCGATCACGGTTCCGCCGCCGCCGGAAACCAGAAGAAGCCGGCGGCGGACG
AAGAAAAAGAGGCGAACGCGACGACGGATCAAGAGGTAGATGAATTCTTCGCCATTCTGAAGCGATTACACTCGGCGACCAAAGACATAGAGAAGATCGACGGTGCGAGC
AGCTTGTTGATGGCGAAAAGATCGAAGGCGGCGACGGCGAGCGAGGAAGAAGCCGATGAAGATGAAATTAAGGCAGAGAGAAGAAATTTGGATCGAGATCTGAGAAGAAA
TTTGAATCTGGATCTGAACTTAGAACCTGTTTCTGTTGAATCGGATGATACACACAGGATTAGCCGGAATCTCAATCTGAAGCCGTTGTTTATGGATTCCGCCGCCGATT
CTGGTCGGAAGTAGATGGTACCGGCGTTGATCGGAGTTTGTCGGAGCCGGAGAAAACTCGACGGCGTCCATTATTCGGGCTGATTAACTGGTATTGGAGCATTGGTTTCG
GATTCGGGTAAGCCTGATTCGACCCGAAGTTTTCTTGTTTCAATTCTATATATATAAACTATGGATCGATTATTAGATATTGAATATTATTTTAATTAGTCGATAAGGTT
GTTTTATATAATCTGATGTATTGATTTCAAAAAATATATATATAAAAAATCTGATGTATTGGAAATTTGGGATCATAATCTGATGTAATCTTGTA
Protein sequenceShow/hide protein sequence
MPFELFPASQSTDRGKRKRENDADHGSAAAGNQKKPAADEEKEANATTDQEVDEFFAILKRLHSATKDIEKIDGASSLLMAKRSKAATASEEEADEDEIKAERRNLDRDL
RRNLNLDLNLEPVSVESDDTHRISRNLNLKPLFMDSAADSGRK