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Sed0005155 (gene) of Chayote v1 genome

Gene IDSed0005155
OrganismSechium edule (Chayote v1)
DescriptionMixed-linked glucan synthase
Genome locationLG13:23164449..23165651
RNA-Seq ExpressionSed0005155
SyntenySed0005155
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064464.1 hypothetical protein E6C27_scaffold255G001780 [Cucumis melo var. makuwa]4.0e-4896.15Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND+PLI NDGNLRQDG AAGRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

KAG6591437.1 hypothetical protein SDJN03_13783, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4890.18Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRS+SMEPRVRTSSP+H SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND PLI NDGNL+QDG AAGRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKKCQALVDAI
        KGKKCQ LVDAI
Subjt:  KGKKCQALVDAI

KAG7024315.1 hypothetical protein SDJN02_13129, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-4889.29Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MA+ITSTCSSFFSIRS+SMEPRVRTSSP+H SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND PLI NDGNL+QDG AAGRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKKCQALVDAI
        KGKKCQ LVDAI
Subjt:  KGKKCQALVDAI

XP_022977101.1 uncharacterized protein LOC111477268 [Cucurbita maxima]6.1e-4991.07Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRS+SMEPRVRTSSPSH SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND PLI NDGNL+QDG AAGRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKKCQALVDAI
        KGKKCQ LVDAI
Subjt:  KGKKCQALVDAI

XP_038897734.1 uncharacterized protein LOC120085674 isoform X1 [Benincasa hispida]4.4e-4795.19Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRSNSMEPR+RTSS SHGSP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLI NDGNLRQDG AAGRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

TrEMBL top hitse value%identityAlignment
A0A0A0L2M3 Uncharacterized protein1.6e-4794.23Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND+PLI NDGNLRQ+G A GRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A2R6R383 Protease3.0e-3368.47Show/hide
Query:  MAAIT-STCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRA
        MAA T S+CSSFF++R+N +EPRVR SSPSHGSP CGK DGV  WLING  +AFF SL+RCSCIRI+T EDDGD+AN++PLI NDGN R D R+ GRRR 
Subjt:  MAAIT-STCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRA

Query:  GKGKKCQALVD
        GKGKK  A ++
Subjt:  GKGKKCQALVD

A0A5D3D9D4 Uncharacterized protein1.9e-4896.15Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND+PLI NDGNLRQDG AAGRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A6J1IIU9 uncharacterized protein LOC1114772683.0e-4991.07Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG
        MAAITSTCSSFFSIRS+SMEPRVRTSSPSH SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND PLI NDGNL+QDG AAGRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAG

Query:  KGKKCQALVDAI
        KGKKCQ LVDAI
Subjt:  KGKKCQALVDAI

A0A7J0DXN0 Uncharacterized protein8.7e-3367.57Show/hide
Query:  MAAIT-STCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRA
        MAA T S+CSS F++R+N +EPRVR SSPSHGSP CGK DGV  WLING  +AFF SL+RCSCIRI+T EDDGD+AN++PLI NDGN R D R+ GRRR 
Subjt:  MAAIT-STCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRA

Query:  GKGKKCQALVD
        GKGKK  A ++
Subjt:  GKGKKCQALVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein2.8e-0740.3Show/hide
Query:  SNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDD--GDEANDVPL
        S+S+     T+S +  + S  KLD  A+W+    ++AFF SLERCSC+ ++T++DD  G+E+++ PL
Subjt:  SNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDD--GDEANDVPL

AT4G24026.1 unknown protein1.8e-0635.59Show/hide
Query:  MEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND
        M+  +  +S    + S  K+D  A+W+    ++AFF SLERC+C+ ++T+ DD D+ +D
Subjt:  MEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATTACTTCCACCTGCAGCAGCTTCTTCTCCATCAGATCAAATTCTATGGAGCCAAGAGTCAGAACTTCTTCACCAAGCCATGGCTCCCCATCATGTGGGAA
GCTTGATGGAGTGGCAACTTGGCTCATCAATGGCTTTGTGACAGCTTTCTTTGGATCGTTGGAACGATGCTCGTGTATCCGTATCGCTACCGCTGAGGACGACGGCGATG
AGGCGAACGACGTCCCCTTGATCTCGAACGATGGAAATCTTCGACAGGACGGCCGTGCTGCAGGCCGGAGGAGGGCTGGGAAAGGCAAGAAATGTCAGGCTCTTGTAGAT
GCCATCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTCATTTAATTGGCTCCTGATTTTGAATTTGTCTTTGTAATTGTAGATGAATTTATTAACAAGCCCAAATTCACAATTGGCTCAACCATCTCGAGTTGGCCTAA
TAGTTGAGAGTACTTCATAGAACCAAAAGATTATGAATTCAATTTATGGTAGCCAGCTACCAAAAATATATTTTTTACAAGTTTTCTTGATTGCCAAATATTGTAAGGTC
AGGAAAACTCGGCTGAAGACTTATAGATATCCAAAAAAGAAAGAAAAATCATGATTGGCTGTTTGCACGCTTTGTTAGCAACTTCTGTTTATGTTTTGTTTTTTTAATAA
AGATCTTTGTTTTGAGATTAACTTCCACTGGCTTGTCGGTAATTTTAACAGTATCATGTTTCAAAATTTCAACTCTTAATTATTAACACAGGGTTGAAAGAAGATGCTCC
TTTGGAAGTTATAAGCTGCTAGTTTGGAGCTTTCATAACTGTGTATGTTTCTCTCTCTGTTTCTGGCTCAGGTACAAACAAAAGCTTGAAATTCCATTTCCATGGCTGCC
ATTACTTCCACCTGCAGCAGCTTCTTCTCCATCAGATCAAATTCTATGGAGCCAAGAGTCAGAACTTCTTCACCAAGCCATGGCTCCCCATCATGTGGGAAGCTTGATGG
AGTGGCAACTTGGCTCATCAATGGCTTTGTGACAGCTTTCTTTGGATCGTTGGAACGATGCTCGTGTATCCGTATCGCTACCGCTGAGGACGACGGCGATGAGGCGAACG
ACGTCCCCTTGATCTCGAACGATGGAAATCTTCGACAGGACGGCCGTGCTGCAGGCCGGAGGAGGGCTGGGAAAGGCAAGAAATGTCAGGCTCTTGTAGATGCCATCTAA
TGAGCTCTGCTACATATGTTGTATAATAATCCATATCAAAAAGCTCATCTTTGGTAAGTTATGTGAAGGGAGCTTCTGAATCTGAGAAATTTACTGCTTTTTTGTTTTGT
TTTGTGGAGATGAAATCAACCAAATTACTTCCTTATCGCCTTTTGAATTGGAGGTGAAGAATTCAAACCGATAACCTTTAAGCTATTAGGTCATATATCATGTCAAAATC
AGCTTTTGTTAACATTGTGTCTGAACTATTGAATCTCAAATTATCATTTCAATAACAATCTAAATGTTGATCTTTCATTAAGAACTTTGATTTTAGGATGCCA
Protein sequenceShow/hide protein sequence
MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDVPLISNDGNLRQDGRAAGRRRAGKGKKCQALVD
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