CuGenDBv2

Gene ID	Sed0005171
Organism	Sechium edule (Chayote v1)
Description	UPF0235 protein C15orf40 homolog
Genome location	LG01:409983..411496
RNA-Seq Expression	Sed0005171
Synteny	Sed0005171
Gene Ontology terms	NA
InterPro domains	IPR003746 - Protein of unknown function DUF167 IPR036591 - YggU-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004151587.1 uncharacterized protein LOC101218498 [Cucumis sativus]

5.1e-19

57.14

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Query:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK +   +     S+V+S ++PSCLR VSPSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K       +  +  S    ++RQ+SI SGS
Subjt:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQL
        KSR KVVIVE +
Subjt:  KSRHKVVIVEQL

XP_022143592.1 uncharacterized protein LOC111013451 [Momordica charantia]

1.3e-19

60.19

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Query:  MGGAKKGKRRI-ESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK--MEKPMPLFSISCPL-CQKRQLSIASGSKSRH
        M  AKKGK +  +++ +++S  FPSCLR V+PSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K        L  IS  L  ++RQ+SI SGSKSR 
Subjt:  MGGAKKGKRRI-ESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK--MEKPMPLFSISCPL-CQKRQLSIASGSKSRH

Query:  KVVIVEQL
        KVVIVE++
Subjt:  KVVIVEQL

XP_038902100.1 UPF0235 protein C15orf40 homolog isoform X1 [Benincasa hispida]

3.0e-19

57.66

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Query:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK +   +     S+V++ ++PSCLR VSPSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K       +  +  S    ++RQLSI SGS
Subjt:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQ
        KSR KVVIVE+
Subjt:  KSRHKVVIVEQ

XP_038902101.1 UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]

2.3e-19

57.14

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Query:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK +   +     S+V++ ++PSCLR VSPSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K       +  +  S    ++RQLSI SGS
Subjt:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQL
        KSR KVVIVE++
Subjt:  KSRHKVVIVEQL

XP_038902103.1 UPF0235 protein C15orf40 homolog isoform X3 [Benincasa hispida]

3.0e-19

57.66

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Query:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK +   +     S+V++ ++PSCLR VSPSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K       +  +  S    ++RQLSI SGS
Subjt:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQ
        KSR KVVIVE+
Subjt:  KSRHKVVIVEQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMY2 Uncharacterized protein

2.5e-19

57.14

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Query:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK +   +     S+V+S ++PSCLR VSPSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K       +  +  S    ++RQ+SI SGS
Subjt:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQL
        KSR KVVIVE +
Subjt:  KSRHKVVIVEQL

A0A1S3CDI8 UPF0235 protein LHK_03181

2.1e-18

55.36

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Query:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK +   +     S+V++ ++PSCLR VSPSSVA+TIHAKP SKIASIT+  DDALGVQIDAP K       +  +  S    ++RQ+SI SGS
Subjt:  MGGAKKGKRRIESS-----SAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQL
        KSR KVVIVE++
Subjt:  KSRHKVVIVEQL

A0A498K2T7 Uncharacterized protein

1.2e-18

53.57

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Query:  MGGAKKGKRRIESSSAVE-----SRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M   KKGK + +S+S  E     + +FP+C+R V PSSVA+TIHAKP SKIA+IT+  DDALGVQIDAPPK       +  +  S    ++RQ+SI SGS
Subjt:  MGGAKKGKRRIESSSAVE-----SRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQL
        KSR KVVIVE +
Subjt:  KSRHKVVIVEQL

A0A6J1CR98 uncharacterized protein LOC111013451

6.5e-20

60.19

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Query:  MGGAKKGKRRI-ESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK--MEKPMPLFSISCPL-CQKRQLSIASGSKSRH
        M  AKKGK +  +++ +++S  FPSCLR V+PSSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K        L  IS  L  ++RQ+SI SGSKSR 
Subjt:  MGGAKKGKRRI-ESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK--MEKPMPLFSISCPL-CQKRQLSIASGSKSRH

Query:  KVVIVEQL
        KVVIVE++
Subjt:  KVVIVEQL

A0A6J1EMK4 uncharacterized protein LOC111434889

7.2e-19

55.36

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Query:  MGGAKKGKRRIE-----SSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS
        M  AKKGK + +     + S +++ ++PSCLR VS SSVA+TIHAKP SKIASIT+ GDDALGVQIDAP K       +  +  S    ++RQLSI SGS
Subjt:  MGGAKKGKRRIE-----SSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGS

Query:  KSRHKVVIVEQL
        KSR KVVIVE++
Subjt:  KSRHKVVIVEQL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49170.1 Protein of unknown function (DUF167)

1.7e-20

52.43

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Query:  KKGKRRIESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGSKSRHKVVIV
        KK K   ES++  ES  FP+CLR ++PSSVA+TIHAKP SK ASIT++ D+A+GVQIDAP +       +  +  S    ++RQ+S+ SGSKSR KVVIV
Subjt:  KKGKRRIESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPK---MEKPMPLFSISCPLCQKRQLSIASGSKSRHKVVIV

Query:  EQL
        E +
Subjt:  EQL

Sequences

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CDS sequence

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mRNA sequence

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ATGGGTGGGGCGAAGAAGGGGAAAAGGAGAATTGAATCCTCGTCCGCGGTGGAGAGCCGGCATTTCCCTTCGTGTCTCCGCTGCGTTTCTCCGTCGTCCGTCGCCGTCAC
CATCCACGCGAAGCCTGCCTCCAAGATCGCCTCTATCACTGAGTTGGGCGATGATGCCTTGGGAGTGCAGATCGACGCACCCCCAAAGATGGAGAAGCCAATGCCGCTCT
TCTCCATTTCATGTCCTCTGTGTCAAAAAAGACAACTATCCATCGCCTCTGGCTCTAAATCAAGACATAAGGTTGTCATAGTGGAACAGTTGATGGACCATGATTCTAGG
GTCTATGCTTGATATACAACAACGGACCAAGTGAATACATCAACATTTGTTTTTCTTTTTATGAGAAGTGCAATGAGATCATCTCGCCATGCTCAATCCAATTTGGTCGC
AGTGTCAACCAATTGACTATTGTTGAACAATGGTACAATTCTAGTTCTTCAGTGGATTTTCGATGATTTCATTCAATGTCTCTAGTTGAGTTATTTAGCTTCACGTTGAT
TAATGTTTCTCCAGATATCATAACTCATTTAGTAGGTTCGTTTATGTTTGTATGGATCTTTTGAGGTAAGGAAAGCTTTAATTTTTATGTAGTTTTTGTTGCTTGACTTC
GAGCCGACCCCAACTC

Protein sequence

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MGGAKKGKRRIESSSAVESRHFPSCLRCVSPSSVAVTIHAKPASKIASITELGDDALGVQIDAPPKMEKPMPLFSISCPLCQKRQLSIASGSKSRHKVVIVEQLMDHDSR
VYA

Sed0005171 (gene) of Chayote v1 genome