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Sed0005193 (gene) of Chayote v1 genome

Gene IDSed0005193
OrganismSechium edule (Chayote v1)
Descriptionethylene-responsive transcription factor TINY
Genome locationLG06:45474950..45475642
RNA-Seq ExpressionSed0005193
SyntenySed0005193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606753.1 Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma subsp. sororia]7.6e-2567.02Show/hide
Query:  MPTDIQAAEAKAAAMVDFD--LPTASID--EGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN
        MPTDIQAA AKAAAMVDFD  +PT S    E GSD+LGEIVELPNIEEE  AESWN+F+  D VDWW  PP+  AETDF  GF DQ+TIP + +
Subjt:  MPTDIQAAEAKAAAMVDFD--LPTASID--EGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN

KAG7036467.1 hypothetical protein SDJN02_00084, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-2567.02Show/hide
Query:  MPTDIQAAEAKAAAMVDFD--LPTASID--EGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN
        MPTDIQAA AKAAAMVDFD  +PT S    E GSD+LGEIVELPNIEEE  AESWN+F+  D VDWW  PP+  AETDF  GF DQ+TIP + +
Subjt:  MPTDIQAAEAKAAAMVDFD--LPTASID--EGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN

XP_008447541.1 PREDICTED: ethylene-responsive transcription factor TINY [Cucumis melo]3.8e-2469.32Show/hide
Query:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP
        MP DIQ A AKAAAMVDFD  T S   G  GSD+LGEIVELPNIEE+ RAESWNEF+F D VDWW  PPF AAE DF   F DQ+T P
Subjt:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP

XP_022949201.1 ethylene-responsive transcription factor TINY-like [Cucurbita moschata]6.4e-2468.09Show/hide
Query:  MPTDIQAAEAKAAAMVDFD--LPT--ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN
        MPTDIQAA AKAAAMVDFD  +PT  +S DE GSD+LGEIVELPNIEEE  AES N+F+  D VDWW  PP+ AAETDF  GF DQ TIP + +
Subjt:  MPTDIQAAEAKAAAMVDFD--LPT--ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN

XP_022979607.1 ethylene-responsive transcription factor TINY-like [Cucurbita maxima]8.4e-2469.66Show/hide
Query:  MPTDIQAAEAKAAAMVDFDLPT-----ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNT
        MP DIQAA AKAAAMVDFD  T     +S DEGGSD+LGEIVELPNIEE+ RAESW+EF+F D VDWW  PPF AAE DF   F DQ+T
Subjt:  MPTDIQAAEAKAAAMVDFDLPT-----ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNT

TrEMBL top hitse value%identityAlignment
A0A0A0LAT8 Uncharacterized protein1.1e-2463.27Show/hide
Query:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP-TLINNIIYY
        MP DIQ A AKAAAMVDFD  T S   G  GSD+L EIVELPNIEE+ RAESWNEF+F D VDWW  PPF AAE DF   F DQ+T P  L+N+++++
Subjt:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP-TLINNIIYY

A0A1S3BHN5 ethylene-responsive transcription factor TINY1.8e-2469.32Show/hide
Query:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP
        MP DIQ A AKAAAMVDFD  T S   G  GSD+LGEIVELPNIEE+ RAESWNEF+F D VDWW  PPF AAE DF   F DQ+T P
Subjt:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP

A0A5D3C9I7 Ethylene-responsive transcription factor TINY1.8e-2469.32Show/hide
Query:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP
        MP DIQ A AKAAAMVDFD  T S   G  GSD+LGEIVELPNIEE+ RAESWNEF+F D VDWW  PPF AAE DF   F DQ+T P
Subjt:  MPTDIQAAEAKAAAMVDFDLPTASIDEG--GSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIP

A0A6J1GBC8 ethylene-responsive transcription factor TINY-like3.1e-2468.09Show/hide
Query:  MPTDIQAAEAKAAAMVDFD--LPT--ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN
        MPTDIQAA AKAAAMVDFD  +PT  +S DE GSD+LGEIVELPNIEEE  AES N+F+  D VDWW  PP+ AAETDF  GF DQ TIP + +
Subjt:  MPTDIQAAEAKAAAMVDFD--LPT--ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLIN

A0A6J1IP61 ethylene-responsive transcription factor TINY-like4.1e-2469.66Show/hide
Query:  MPTDIQAAEAKAAAMVDFDLPT-----ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNT
        MP DIQAA AKAAAMVDFD  T     +S DEGGSD+LGEIVELPNIEE+ RAESW+EF+F D VDWW  PPF AAE DF   F DQ+T
Subjt:  MPTDIQAAEAKAAAMVDFDLPT-----ASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACGGATATTCAGGCGGCGGAGGCCAAGGCGGCGGCGATGGTGGATTTTGATTTACCGACGGCGTCGATTGATGAAGGAGGGTCTGATGATTTGGGGGAGATTGT
GGAATTGCCCAATATTGAAGAGGAATTTAGAGCTGAGTCGTGGAACGAGTTCCAGTTCGATGACCCGGTCGATTGGTGGAGGAAACCGCCGTTCGCGGCGGCGGAAACGG
ATTTCTCTTGCGGGTTTCCCGATCAGAATACGATTCCGACATTAATTAATAATATAATTTATTATCATATTAATAAGGTACATTTACTAGTAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGACGGATATTCAGGCGGCGGAGGCCAAGGCGGCGGCGATGGTGGATTTTGATTTACCGACGGCGTCGATTGATGAAGGAGGGTCTGATGATTTGGGGGAGATTGT
GGAATTGCCCAATATTGAAGAGGAATTTAGAGCTGAGTCGTGGAACGAGTTCCAGTTCGATGACCCGGTCGATTGGTGGAGGAAACCGCCGTTCGCGGCGGCGGAAACGG
ATTTCTCTTGCGGGTTTCCCGATCAGAATACGATTCCGACATTAATTAATAATATAATTTATTATCATATTAATAAGGTACATTTACTAGTAAGATGA
Protein sequenceShow/hide protein sequence
MPTDIQAAEAKAAAMVDFDLPTASIDEGGSDDLGEIVELPNIEEEFRAESWNEFQFDDPVDWWRKPPFAAAETDFSCGFPDQNTIPTLINNIIYYHINKVHLLVR