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Sed0005209 (gene) of Chayote v1 genome

Gene IDSed0005209
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:22361518..22361862
RNA-Seq ExpressionSed0005209
SyntenySed0005209
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]4.5e-3978.07Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MSL   ++ NGY KVDKEDPEEIIH+RAQFLINKVLERADSMGKPSYLRIRIRRLK+RFGRRLK+LKKS  AM  IS++KIGVYKQVI QIRNCK LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        KQTNF + P+ +SS
Subjt:  KQTNFVDLPLFISS
XP_008439979.1 PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]5.5e-3775.44Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS    ++PNGY KVDKEDPEEII +RAQFLINKVLERADSMGKPSYLRIRIRRLK+RFG+RLKKLKKS  AMA IS++K+GVYKQVI QIRN K LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        KQT F + P+ +SS
Subjt:  KQTNFVDLPLFISS
XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]5.0e-3878.07Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS   IR+PNGYSKVDKEDPEEIIH+RAQFLINKVLERA+SMGKPSYLRIRIRRLK+RFGRRLKKLKKSAL  A IS+ KIGVYKQVI Q+RNCK LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        K+    +L  F+SS
Subjt:  KQTNFVDLPLFISS
XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]2.9e-3875.44Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS   ++  NGYSKVDKEDPEEIIH+RAQF+INKVLERADSMGK SYLRIRIRRL++RFGRRLKKLKKS  AMA I ++KI VYKQ+ICQIRNCK LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        K+TNF +LP  +SS
Subjt:  KQTNFVDLPLFISS
XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]1.4e-4081.58Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS   IR+PNGYSKVDKEDPEEIIH+RAQFLINKVLERADSMGKPSYLRIRIRRLK+RFGRRLKKLKKS  AMA IS++KIGVYKQVI QIRNCK LF  
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        KQT+F + PL +SS
Subjt:  KQTNFVDLPLFISS
TrEMBL top hitse value%identityAlignment
A0A0A0KJX3 Uncharacterized protein2.2e-3978.07Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MSL   ++ NGY KVDKEDPEEIIH+RAQFLINKVLERADSMGKPSYLRIRIRRLK+RFGRRLK+LKKS  AM  IS++KIGVYKQVI QIRNCK LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        KQTNF + P+ +SS
Subjt:  KQTNFVDLPLFISS
A0A1S3B0N9 uncharacterized protein LOC1034846042.7e-3775.44Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS    ++PNGY KVDKEDPEEII +RAQFLINKVLERADSMGKPSYLRIRIRRLK+RFG+RLKKLKKS  AMA IS++K+GVYKQVI QIRN K LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        KQT F + P+ +SS
Subjt:  KQTNFVDLPLFISS
A0A5D3CMA4 Uncharacterized protein2.7e-3775.44Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS    ++PNGY KVDKEDPEEII +RAQFLINKVLERADSMGKPSYLRIRIRRLK+RFG+RLKKLKKS  AMA IS++K+GVYKQVI QIRN K LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        KQT F + P+ +SS
Subjt:  KQTNFVDLPLFISS
A0A6J1CLW2 uncharacterized protein LOC1110124782.4e-3878.07Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS   IR+PNGYSKVDKEDPEEIIH+RAQFLINKVLERA+SMGKPSYLRIRIRRLK+RFGRRLKKLKKSAL  A IS+ KIGVYKQVI Q+RNCK LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        K+    +L  F+SS
Subjt:  KQTNFVDLPLFISS
A0A6J1KP23 uncharacterized protein LOC1114974081.4e-3875.44Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR
        MS   ++  NGYSKVDKEDPEEIIH+RAQF+INKVLERADSMGK SYLRIRIRRL++RFGRRLKKLKKS  AMA I ++KI VYKQ+ICQIRNCK LF R
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPR

Query:  KQTNFVDLPLFISS
        K+TNF +LP  +SS
Subjt:  KQTNFVDLPLFISS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein1.7e-1236.52Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGK----PSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKF
        M+LF  ++P  YSK+DKEDPEE++ +RA+FLI K L+ AD + +     S++R+++  LK++ G+RL KL++S ++  R      G+ K     +R  K 
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGK----PSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKF

Query:  LFPRKQTNFVDLPLF
        +F    T  +  P+F
Subjt:  LFPRKQTNFVDLPLF
AT4G04745.1 unknown protein7.2e-1144.87Show/hide
Query:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLR---------IRIRRLKIRFGRRLKKLKKS
        M+L     P  Y+K++KEDP+E+IH+RAQFLI KVLERADS  +    R         IR+  +++R G++L+KL+K+
Subjt:  MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLR---------IRIRRLKIRFGRRLKKLKKS
AT4G21902.1 unknown protein1.5e-0838.67Show/hide
Query:  IRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKIRFGRRLKKLKKSAL
        ++ PN Y+K++KED  EIIH+RAQFLI+K+L+RAD         + + +++   R+  ++++ G++L+KL+KS +
Subjt:  IRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKIRFGRRLKKLKKSAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTTTTCCACATTAGGAAGCCAAATGGGTACTCAAAAGTTGATAAAGAAGACCCAGAAGAGATAATTCATCAAAGAGCACAATTTCTAATCAACAAAGTGTTGGA
ACGAGCAGATTCAATGGGGAAACCTTCATATCTAAGGATTAGAATTCGAAGGCTCAAGATTCGATTCGGAAGAAGATTGAAGAAGCTGAAGAAGAGTGCATTGGCAATGG
CAAGGATTTCTAGTATCAAGATTGGTGTTTACAAGCAAGTTATTTGTCAGATCAGAAATTGCAAGTTTTTGTTTCCCAGAAAACAAACCAATTTTGTTGATCTTCCTCTT
TTCATATCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTTTTCCACATTAGGAAGCCAAATGGGTACTCAAAAGTTGATAAAGAAGACCCAGAAGAGATAATTCATCAAAGAGCACAATTTCTAATCAACAAAGTGTTGGA
ACGAGCAGATTCAATGGGGAAACCTTCATATCTAAGGATTAGAATTCGAAGGCTCAAGATTCGATTCGGAAGAAGATTGAAGAAGCTGAAGAAGAGTGCATTGGCAATGG
CAAGGATTTCTAGTATCAAGATTGGTGTTTACAAGCAAGTTATTTGTCAGATCAGAAATTGCAAGTTTTTGTTTCCCAGAAAACAAACCAATTTTGTTGATCTTCCTCTT
TTCATATCATCTTGA
Protein sequenceShow/hide protein sequence
MSLFHIRKPNGYSKVDKEDPEEIIHQRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSALAMARISSIKIGVYKQVICQIRNCKFLFPRKQTNFVDLPL
FISS