; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005210 (gene) of Chayote v1 genome

Gene IDSed0005210
OrganismSechium edule (Chayote v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationLG02:49993130..49995581
RNA-Seq ExpressionSed0005210
SyntenySed0005210
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-9289.06Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVRDVEV  EKEKRDG+N QRYIITCLLENLLKEKASKDHGY+LAVTSLKS+GKGE KN  ES CVSFPITF CRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        RGLLLKCGPIKYVFLS RKMPTYHYVGGENPVFSS + ATIG DVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDE DL
Subjt:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

XP_004134101.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]2.9e-9188.42Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEKRD  NFQRYIITCLLENLLKEKA+KDHGY+L+VTSL+S+GKG  KNES CVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        LLLKCGPIKYVFLS RKMPTY YVGGENPVFSS +FATIG DVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

XP_008438585.1 PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo]2.9e-9188.42Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEKRD  NFQRYIITCLLENLLKEKA+KDHGY+L+VTSLKS+GKG  KNES CVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        LLLKCGPIKY FLS RKMPTY YVGGENPVFSS +FATIG DVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]2.0e-9289.58Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVRDVEV  EKEKRDG+N QRYIITCLLENLLKEKASKDHGY+LAVTSLKS+GKGE KN  ES CVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        RGLLLKCGPIKYVFLS RKMPTYHYVGGENPVFSS + ATIG DVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDE DL
Subjt:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]9.0e-9389.47Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELV+DVE+ AEKEKRD LNFQRYIITCLLENLLKEKA+KDHGY+LAVTSLKS+GKG   ++S CVSFPITFSCRTFLPFEGEILHGVV HIFRRG
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        LLLKCGPIKYVFLS  KMPTYHYVGGENPVFSSN+FATIG DVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein1.4e-9188.42Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEKRD  NFQRYIITCLLENLLKEKA+KDHGY+L+VTSL+S+GKG  KNES CVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        LLLKCGPIKYVFLS RKMPTY YVGGENPVFSS +FATIG DVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like1.4e-9188.42Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEKRD  NFQRYIITCLLENLLKEKA+KDHGY+L+VTSLKS+GKG  KNES CVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        LLLKCGPIKY FLS RKMPTY YVGGENPVFSS +FATIG DVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like1.4e-9188.42Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEKRD  NFQRYIITCLLENLLKEKA+KDHGY+L+VTSLKS+GKG  KNES CVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        LLLKCGPIKY FLS RKMPTY YVGGENPVFSS +FATIG DVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like9.7e-9389.58Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVRDVEV  EKEKRDG+N QRYIITCLLENLLKEKASKDHGY+LAVTSLKS+GKGE KN  ES CVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        RGLLLKCGPIKYVFLS RKMPTYHYVGGENPVFSS + ATIG DVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDE DL
Subjt:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X12.4e-9188.54Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVR+VEV  EKEKRDG+N QRYIITCLLENLLKEKASKDHGY+LAVTSLKS+GK E KN  ES CVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN--ESPCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL
        RGLLLKCGPIKYVFLS RKMPTYHYVGGENPVFSS + ATIG DVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDE DL
Subjt:  RGLLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 71.5e-3743.65Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V + AE     GL  +R I+  LLE    +KA+K+ GYY+AVT+L  +G+G+ +  +  V FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + K + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS

P38421 DNA-directed RNA polymerase II subunit 76.2e-1227.1Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF  + L R++++     +  G N +  +++ L+++ ++   S  HG+ +A+T + ++GKG  ++ +  V+FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMP-TYHYVGGENPVF-SSNKFATIGYDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P + +S+    I  +  VR  ++G R
Subjt:  LLLKCGPIKYVFLSVRKMP-TYHYVGGENPVF-SSNKFATIGYDVVVRFSVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB71.6e-1228.39Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF  + L R++++     +  G N +  +++ L+++ ++   S  HG+ +AVT ++++GKG  ++ +  V+FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMP-TYHYVGGENPVF-SSNKFATIGYDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P + +S+    I  D  VR  ++G R
Subjt:  LLLKCGPIKYVFLSVRKMP-TYHYVGGENPVF-SSNKFATIGYDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein4.6e-3941.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG+YL +T+LKS+G  +  N       ++  ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS+ KMP YHYV       E P F  +  + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 71.6e-3141.9Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV + AE +   GL  QR I+  LLE   KEKA+KD GY +  T L+++G+G+ K ++  + FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain1.1e-3241.9Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV + AE +   GL  QR I+  LLE   KEKA+KD GY +  T L+++G+G+ K ++  + FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related3.2e-4041.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG+YL +T+LKS+G  +  N       ++  ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS+ KMP YHYV       E P F  +  + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related3.2e-4041.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG+YL +T+LKS+G  +  N       ++  ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS+ KMP YHYV       E P F  +  + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related3.2e-4041.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG+YL +T+LKS+G  +  N       ++  ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKN-------ESPCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS+ KMP YHYV       E P F  +  + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSVRKMPTYHYVGG-----ENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.0e-3843.65Show/hide
Query:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V + AE     GL  +R I+  LLE    +KA+K+ GYY+AVT+L  +G+G+ +  +  V FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + K + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGGAAGTCATGGCCGAAAAGGAAAAGAGAGATGGTCTCAACTTCCAGAGGTACATTATAACATGTCTATTAGAAAACCT
ATTAAAGGAGAAGGCCAGCAAAGACCATGGCTATTATCTTGCTGTTACCAGCTTGAAGAGCGTAGGCAAGGGAGAGACAAAGAACGAGTCTCCGTGTGTTTCATTCCCCA
TTACCTTTAGTTGTCGAACCTTTTTGCCTTTCGAGGGAGAGATCTTGCACGGAGTTGTTCGACACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTAT
GTGTTCCTTTCCGTTCGTAAAATGCCAACCTACCATTACGTTGGTGGTGAAAATCCTGTTTTCTCAAGCAACAAATTTGCAACAATTGGATACGACGTCGTTGTACGGTT
CAGCGTGCTTGGTGTGAGGTGGATAGAGAAAAGAGGATGCATAAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAATAACTCACTTGGACCTATTTCGTTGTCTG
ATTCCGATGAGTTGGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
GATAAATATCTGAGAAAAGACGAAAAGCAAGGATGGGAGCAGCTTCCATTTGCAAAGATCCATATAATATTATTGTGTTTCTATAAAAATGGCGAAACCACCATTGCCCA
TTGCTTATCCATTTCTCACTTCGCCAATCATAATATCCCAACTCTCCCTAATTTCTACCCAATTTCTTTTTTCTAGCTCTTCGCATTTCTCGCCGCCGCCGCCGCCGCTC
CTCCTCCTCCTCCGCCGCCGCCGCTCTCAATTTCTCCTTACAGATCTGGGAAATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGGAAGTCATGGCCGAAAAGGAAAAGA
GAGATGGTCTCAACTTCCAGAGGTACATTATAACATGTCTATTAGAAAACCTATTAAAGGAGAAGGCCAGCAAAGACCATGGCTATTATCTTGCTGTTACCAGCTTGAAG
AGCGTAGGCAAGGGAGAGACAAAGAACGAGTCTCCGTGTGTTTCATTCCCCATTACCTTTAGTTGTCGAACCTTTTTGCCTTTCGAGGGAGAGATCTTGCACGGAGTTGT
TCGACACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTATGTGTTCCTTTCCGTTCGTAAAATGCCAACCTACCATTACGTTGGTGGTGAAAATCCTG
TTTTCTCAAGCAACAAATTTGCAACAATTGGATACGACGTCGTTGTACGGTTCAGCGTGCTTGGTGTGAGGTGGATAGAGAAAAGAGGATGCATAAAAAAGGAGTTTGTG
ATGCTTGCTAGCTTAGAAGGTAATAACTCACTTGGACCTATTTCGTTGTCTGATTCCGATGAGTTGGACTTGTAAATTTAGAACATAAACCACAAACTTGGGAATGCTTC
ATATTGTAATATATTCTTACACGGCTTGCTGATTACTTGTCTTCTGCATCTTTATATGTTTGTTGTTCTTCATGGCAATGATAAATGATAATTGAAGATTCTTGTAGGAT
GTTAATGTGAATTTCTTGAGTTGGAAAGTAGATATTTGCAAAACAATAATGTGGTATCAAATTGATGTTTTATGTTGCTGTTTTTTCATTGGCTCAAATAGAATTCGTTG
CTGTTTTTTTCGCCTATGTCGATGTGTGCTTGACATAAAGTTATCGCCATAAATAT
Protein sequenceShow/hide protein sequence
MFCEVELVRDVEVMAEKEKRDGLNFQRYIITCLLENLLKEKASKDHGYYLAVTSLKSVGKGETKNESPCVSFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLKCGPIKY
VFLSVRKMPTYHYVGGENPVFSSNKFATIGYDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDELDL