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Sed0005216 (gene) of Chayote v1 genome

Gene IDSed0005216
OrganismSechium edule (Chayote v1)
DescriptionProtein IDA-like
Genome locationLG03:7714151..7714631
RNA-Seq ExpressionSed0005216
SyntenySed0005216
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574002.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0746.25Show/hide
Query:  SNNNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFG-LPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        SNN   + +L LLLL    S+ RP+ P   +   G +  +  T FR+R + FSFLP+  PIPPSAPS RHNS+++S P N
Subjt:  SNNNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFG-LPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

KAG6579701.1 hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1262.96Show/hide
Query:  LSNN--NSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPV
        L NN  N+ L   FLL LL  FSSARP P       F  PA P TAFRF HQVFSFLPKGTPIPPSAPSKRHNS+++   V
Subjt:  LSNN--NSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPV

KAG6601760.1 hypothetical protein SDJN03_06993, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1056.96Show/hide
Query:  MALSNNNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSA
        MA + +N+ +  L LL+LLP F+SARP PPA       LP  P  A +F+ Q FSFLP+G PIPPSAPSKRHNS+L+SA
Subjt:  MALSNNNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSA

KGN51548.1 hypothetical protein Csa_008377 [Cucumis sativus]1.2e-1461.04Show/hide
Query:  NNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        ++S+ F+L L+L LP F++ARP P            H TTAFRF HQ+FSFLPKG PIPPSAPSKRHNSL+NSAP+N
Subjt:  NNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

QRG29086.1 IDL1 [Rosa x borboniana]3.3e-0771.05Show/hide
Query:  TAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        TAFRFR ++FSF PKG+P+PPS PSKRHNS++NS P N
Subjt:  TAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

TrEMBL top hitse value%identityAlignment
A0A0A0KPP8 Uncharacterized protein6.0e-1561.04Show/hide
Query:  NNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        ++S+ F+L L+L LP F++ARP P            H TTAFRF HQ+FSFLPKG PIPPSAPSKRHNSL+NSAP+N
Subjt:  NNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

A0A2P6R1Y4 Uncharacterized protein1.3e-0642.7Show/hide
Query:  SNNNSLLFLLFLLLLLPLFSSARPMPPA--HRDRFFGLPAHP--------TTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        S +  L FL  +LLL+   ++ R       H  R +    H          TAFRFR ++FSF PKG+P+PPS PSKRHNS++NS P N
Subjt:  SNNNSLLFLLFLLLLLPLFSSARPMPPA--HRDRFFGLPAHP--------TTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

A0A5A7SV51 Putative Membrane lipoprotein1.3e-0648.68Show/hide
Query:  NSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        NS+   + LLLLL  FSSA                + TTAFR+  Q F FLPKG PIPPS PS RHNS+++S P N
Subjt:  NSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

A0A5D3CCP4 Putative Membrane lipoprotein1.3e-0648.68Show/hide
Query:  NSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        NS+   + LLLLL  FSSA                + TTAFR+  Q F FLPKG PIPPS PS RHNS+++S P N
Subjt:  NSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

A0A5N5FKV5 Protein IDA-like1.7e-0662.79Show/hide
Query:  PAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN
        P    T FR+R Q+FS+ PKGTPIPPS PSKRHNS ++S P N
Subjt:  PAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN

SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA6.4e-0675Show/hide
Query:  VFSFLPKGTPIPPSAPSKRHNSLLNSAP
        +F +LPKG PIPPSAPSKRHNS +NS P
Subjt:  VFSFLPKGTPIPPSAPSKRHNSLLNSAP

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein4.5e-0775Show/hide
Query:  VFSFLPKGTPIPPSAPSKRHNSLLNSAP
        +F +LPKG PIPPSAPSKRHNS +NS P
Subjt:  VFSFLPKGTPIPPSAPSKRHNSLLNSAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCTCCAACAACAACTCCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTTCTTCCGCTCTTCTCTTCCGCTCGGCCAATGCCGCCCGCTCACCGAGACCGCTTCTT
CGGCCTACCCGCGCACCCGACCACCGCGTTCCGATTCCGCCATCAAGTCTTCAGCTTCCTTCCCAAGGGGACTCCCATCCCCCCCTCCGCCCCCTCCAAGAGGCACAACT
CGCTCCTTAACTCGGCGCCCGTTAACTGA
mRNA sequenceShow/hide mRNA sequence
CATTTATCCTCTCTTCCAAATTCCCCTTCTGATCCCATATGGCTCTCTCCAACAACAACTCCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTTCTTCCGCTCTTCTCTTCC
GCTCGGCCAATGCCGCCCGCTCACCGAGACCGCTTCTTCGGCCTACCCGCGCACCCGACCACCGCGTTCCGATTCCGCCATCAAGTCTTCAGCTTCCTTCCCAAGGGGAC
TCCCATCCCCCCCTCCGCCCCCTCCAAGAGGCACAACTCGCTCCTTAACTCGGCGCCCGTTAACTGACTTCTCACTCCTTCCCTCATACACTTTTTTTTCTTTTTATTAT
AGTATTACCATTTTTATCTTCTTTCTGGGTTTCAAAATTATATTGTCATATAACCCATTTGTTTATATGTGAGAATTCAGAAACAGCCTATGTTTATTGTGTACTTAAGC
GTCTTCTCAATTAATTCAACAACTAGTTACAGATATATGTT
Protein sequenceShow/hide protein sequence
MALSNNNSLLFLLFLLLLLPLFSSARPMPPAHRDRFFGLPAHPTTAFRFRHQVFSFLPKGTPIPPSAPSKRHNSLLNSAPVN