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Sed0005224 (gene) of Chayote v1 genome

Gene IDSed0005224
OrganismSechium edule (Chayote v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationLG09:2366874..2367674
RNA-Seq ExpressionSed0005224
SyntenySed0005224
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0031224 - intrinsic component of membrane (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR000490 - Glycoside hydrolase family 17
IPR017853 - Glycoside hydrolase superfamily
IPR044965 - Glycoside hydrolase family 17, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055783.1 putative glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo var. makuwa]2.8e-1652.75Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES
        N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES

TYK10034.1 putative glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo var. makuwa]9.8e-1748.54Show/hide
Query:  NALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQ
        N+ ++   D + N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+
Subjt:  NALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQ

Query:  SES
         ES
Subjt:  SES

XP_008451157.1 PREDICTED: probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis melo]2.8e-1652.75Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES
        N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES

XP_022968751.1 probable glucan endo-1,3-beta-glucosidase BG4 [Cucurbita maxima]1.7e-1646.3Show/hide
Query:  TYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE
        T    N+L+++   +  NLFD MVD+ Y  ID    E + +V +VIGET WPT G+      + A+ YN+   +H+SSGKGTPRK NI ++GFIRS+FNE
Subjt:  TYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE

Query:  DKEPQSES
        +++P+ ES
Subjt:  DKEPQSES

XP_038880473.1 probable glucan endo-1,3-beta-glucosidase BG5 [Benincasa hispida]2.7e-1945.83Show/hide
Query:  FLQDMDVGFTYGISNALLKNMND---NSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNI
        ++ D  +   Y I N     + D   N  NLFD MV+++Y  ID    E + +VTVV+GET WPT G   DA    A  YN+K ++H+ SGKGTPRKPN+
Subjt:  FLQDMDVGFTYGISNALLKNMND---NSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNI

Query:  NMKGFIRSLFNEDKEPQSES
         ++GFI+S+FNED++PQ +S
Subjt:  NMKGFIRSLFNEDKEPQSES

TrEMBL top hitse value%identityAlignment
A0A1S3BQU9 (1->3)-beta-glucan endohydrolase1.4e-1652.75Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES
        N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES

A0A5A7UIQ2 (1->3)-beta-glucan endohydrolase1.4e-1652.75Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES
        N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+ ES
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES

A0A5A7UKS6 (1->3)-beta-glucan endohydrolase2.3e-1651.09Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVI-AASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES
        NLFD M+D+ Y  I   E E +  VT+V+GET WPT G   +   +  A  YN K  +H+SSGKGTPRKPN+ ++GFI+SLFNE+++P+ ES
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVI-AASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSES

A0A5D3CFP7 (1->3)-beta-glucan endohydrolase4.7e-1748.54Show/hide
Query:  NALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQ
        N+ ++   D + N+FD MVD+ Y  ID      + NV + IGET WPT G+ + A    A TYN+K   H++SGKGTP KPNI ++GFIRSLFNE+++P+
Subjt:  NALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQ

Query:  SES
         ES
Subjt:  SES

A0A6J1HVR6 (1->3)-beta-glucan endohydrolase8.1e-1746.3Show/hide
Query:  TYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE
        T    N+L+++   +  NLFD MVD+ Y  ID    E + +V +VIGET WPT G+      + A+ YN+   +H+SSGKGTPRK NI ++GFIRS+FNE
Subjt:  TYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE

Query:  DKEPQSES
        +++P+ ES
Subjt:  DKEPQSES

SwissProt top hitse value%identityAlignment
O22317 Glucan endo-1,3-beta-glucosidase6.4e-1134.34Show/hide
Query:  SNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKE
        S  ++++   + +NLFD +VD+++  ++ +      NV VV+ E+ WP+ G G +A    A TYNQ L+ H+  G GTPR+P   ++ +I  +FNE+++
Subjt:  SNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKE

O49352 Probable glucan endo-1,3-beta-glucosidase BG44.7e-1439.78Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN
        N+FD + D+    +  +E E +KN+ +V+ ET WP+ G+G       ASTYN+  + H++SGKGTP++PN +M GF+ + FNE+++P     N
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN

O49353 Probable glucan endo-1,3-beta-glucosidase BG55.8e-1236.56Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN
        N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       A TYN+  + H++SGKGTP++PN  + GF+ + FNE+++P     N
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN

P52395 Glucan endo-1,3-beta-glucosidase (Fragment)2.0e-0933.64Show/hide
Query:  AFLQDMDVGFTYGISNALLKNMNDNS---KNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPN
        A+  D  +   Y    AL     +N    +NLFD M+DSIY  ++N+      N+ +V+ E+ WP+ G G  A +  A TY   L+ H SSG GTP++P 
Subjt:  AFLQDMDVGFTYGISNALLKNMNDNS---KNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPN

Query:  INMKGFI
         +++ ++
Subjt:  INMKGFI

Q01412 Glucan endo-1,3-beta-glucosidase A3.5e-0932.41Show/hide
Query:  KNMND-NSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE---DKEPQ
        + +ND   +NLFD +VDS+Y   + L  +   N+ +++ E+ WP+ GH   A +  A TY   L+ H+  G GTP+KP   ++ ++ ++F+E   D +P 
Subjt:  KNMND-NSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNE---DKEPQ

Query:  SESWNLQK
         + + L K
Subjt:  SESWNLQK

Arabidopsis top hitse value%identityAlignment
AT1G33220.1 Glycosyl hydrolase superfamily protein4.1e-1339.08Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEP
        N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       A TYN+  + H+ SGKGTP++PN  M GF+ + FNE+++P
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEP

AT1G77780.1 Glycosyl hydrolase superfamily protein5.0e-1139.29Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNED
        N+FD  +D+  V ++ +    +K   V + ET WPT G+     V  A  YNQ LL  +++GKGTPR+PN+ +  F   +FNED
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNED

AT5G20330.1 beta-1,3-glucanase 43.3e-1539.78Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN
        N+FD + D+    +  +E E +KN+ +V+ ET WP+ G+G       ASTYN+  + H++SGKGTP++PN +M GF+ + FNE+++P     N
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN

AT5G20340.1 beta-1,3-glucanase 54.1e-1336.56Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN
        N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       A TYN+  + H++SGKGTP++PN  + GF+ + FNE+++P     N
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN

AT5G20390.1 Glycosyl hydrolase superfamily protein5.9e-1235.48Show/hide
Query:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN
        N+FD + D+    +  +E E +K++ +V+ ET WP+ G+G       AS YN   + H+ SGKGTP++P   + GF+ + FNE+++P     N
Subjt:  NLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNINMKGFIRSLFNEDKEPQSESWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCTATCCGAGCCAAACAAAGGAATCTTGGATGCCTTCTTACAGGATATGGATGTAGGCTTCACTTATGGCATATCGAATGCGTTGTTAAAGAACATGAACGATAA
CTCTAAGAATCTATTTGATTACATGGTAGACTCGATATATGTAGTCATTGACAACTTAGAAGATGAAAAATTAAAAAATGTTACAGTGGTGATTGGAGAAACTAGATGGC
CAACTGGCGGACATGGATTTGATGCTGGTGTTATTGCTGCAAGTACATATAATCAGAAACTTTTAACACATATGAGTTCTGGGAAGGGAACTCCAAGAAAGCCAAATATT
AACATGAAAGGGTTCATACGAAGTCTTTTCAATGAAGATAAAGAGCCTCAAAGCGAGTCTTGGAATCTTCAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCTATCCGAGCCAAACAAAGGAATCTTGGATGCCTTCTTACAGGATATGGATGTAGGCTTCACTTATGGCATATCGAATGCGTTGTTAAAGAACATGAACGATAA
CTCTAAGAATCTATTTGATTACATGGTAGACTCGATATATGTAGTCATTGACAACTTAGAAGATGAAAAATTAAAAAATGTTACAGTGGTGATTGGAGAAACTAGATGGC
CAACTGGCGGACATGGATTTGATGCTGGTGTTATTGCTGCAAGTACATATAATCAGAAACTTTTAACACATATGAGTTCTGGGAAGGGAACTCCAAGAAAGCCAAATATT
AACATGAAAGGGTTCATACGAAGTCTTTTCAATGAAGATAAAGAGCCTCAAAGCGAGTCTTGGAATCTTCAAAAATGA
Protein sequenceShow/hide protein sequence
MRLSEPNKGILDAFLQDMDVGFTYGISNALLKNMNDNSKNLFDYMVDSIYVVIDNLEDEKLKNVTVVIGETRWPTGGHGFDAGVIAASTYNQKLLTHMSSGKGTPRKPNI
NMKGFIRSLFNEDKEPQSESWNLQK