; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005227 (gene) of Chayote v1 genome

Gene IDSed0005227
OrganismSechium edule (Chayote v1)
DescriptionAlba domain-containing protein
Genome locationLG11:1960456..1963082
RNA-Seq ExpressionSed0005227
SyntenySed0005227
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586319.1 hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4887.31Show/hide
Query:  TVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
        T+ VS   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
Subjt:  TVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS

Query:  EKFDSLMTMAAATREVADAAAGEEKK--AEESKK
        EKFDSLMT A  T E A A  GEEKK   EESK+
Subjt:  EKFDSLMTMAAATREVADAAAGEEKK--AEESKK

XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]4.9e-4885.61Show/hide
Query:  ATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        AT+ VS      ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTMAAATRE---VADAAAGEEKKAEESKK
        LGKSEKFDSLMT A A  E      AAA EEKKAEESK+
Subjt:  LGKSEKFDSLMTMAAATRE---VADAAAGEEKKAEESKK

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]7.5e-4985.21Show/hide
Query:  MATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MAT+ VS      ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTMAAATRE--VADAAAGEEKKAEESKKVEQ
        VLGKSEKFDSLMT A A  E  VA AAAGEE+K  E  K EQ
Subjt:  VLGKSEKFDSLMTMAAATRE--VADAAAGEEKKAEESKKVEQ

XP_022143158.1 uncharacterized protein At2g34160 [Momordica charantia]4.0e-5088.81Show/hide
Query:  MATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        MAT+ VS   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  MATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMTMAAATREVADAAAGEEKKAEESKK
        KSEKFDSLMT A A    A  AA EEKKAEESK+
Subjt:  KSEKFDSLMTMAAATREVADAAAGEEKKAEESKK

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]2.6e-4985.21Show/hide
Query:  MATVVVSEVA--ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        MAT+ VS  A  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  MATVVVSEVA--ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTMAAATREVAD------AAAGEEKKAEESKK
        LGKSEKFDSLMT A A  EV +      AAA EEKKAEE+K+
Subjt:  LGKSEKFDSLMTMAAATREVAD------AAAGEEKKAEESKK

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein2.4e-4885.61Show/hide
Query:  ATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        AT+ VS      ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTMAAATRE---VADAAAGEEKKAEESKK
        LGKSEKFDSLMT A A  E      AAA EEKKAEESK+
Subjt:  LGKSEKFDSLMTMAAATRE---VADAAAGEEKKAEESKK

A0A1S3C2U1 uncharacterized protein At2g341603.6e-4985.21Show/hide
Query:  MATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MAT+ VS      ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTMAAATRE--VADAAAGEEKKAEESKKVEQ
        VLGKSEKFDSLMT A A  E  VA AAAGEE+K  E  K EQ
Subjt:  VLGKSEKFDSLMTMAAATRE--VADAAAGEEKKAEESKKVEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein3.6e-4985.21Show/hide
Query:  MATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MAT+ VS      ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATVVVS---EVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTMAAATRE--VADAAAGEEKKAEESKKVEQ
        VLGKSEKFDSLMT A A  E  VA AAAGEE+K  E  K EQ
Subjt:  VLGKSEKFDSLMTMAAATRE--VADAAAGEEKKAEESKKVEQ

A0A6J1CQ10 uncharacterized protein At2g341601.9e-5088.81Show/hide
Query:  MATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        MAT+ VS   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  MATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMTMAAATREVADAAAGEEKKAEESKK
        KSEKFDSLMT A A    A  AA EEKKAEESK+
Subjt:  KSEKFDSLMTMAAATREVADAAAGEEKKAEESKK

A0A6J1HLL6 uncharacterized protein At2g34160-like6.9e-4886.57Show/hide
Query:  TVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
        T+ VS   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS
Subjt:  TVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS

Query:  EKFDSLMTMAAATREVADAAAGEEKK--AEESKK
        EKFDSLMT A    E A A  GEEKK   EESK+
Subjt:  EKFDSLMTMAAATREVADAAAGEEKK--AEESKK

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341606.9e-3775.22Show/hide
Query:  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT
        ++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L  
Subjt:  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT

Query:  MAAATREVADAAA
        MAAA  E  DA A
Subjt:  MAAATREVADAAA

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.3e-3870.16Show/hide
Query:  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT
        +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD LM 
Subjt:  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT

Query:  MAAATREVADAAAGEEKKAEESKK
                  AAA EEK+A E+++
Subjt:  MAAATREVADAAAGEEKKAEESKK

AT2G34160.1 Alba DNA/RNA-binding protein4.9e-3875.22Show/hide
Query:  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT
        ++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L  
Subjt:  ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT

Query:  MAAATREVADAAA
        MAAA  E  DA A
Subjt:  MAAATREVADAAA

AT3G04620.1 Alba DNA/RNA-binding protein2.7e-4472.93Show/hide
Query:  ATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK
        AT   +   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGK
Subjt:  ATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK

Query:  SEKFDSLMTMAAATREVADAAAGEEKKAEESKK
        S+KFDSL+      +   + A+ E + + E+++
Subjt:  SEKFDSLMTMAAATREVADAAAGEEKKAEESKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGTTGTGGTATCGGAAGTCGCCGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTA
CATTCAACAACACAATGAAGTTGAGCTCTCTGCATTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCTACAGAGAAGAAAG
TCTTGACCTCGACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCGGAGAAATTTGATTCTCTAATGACT
ATGGCCGCAGCAACACGAGAGGTTGCCGATGCGGCTGCTGGCGAAGAAAAAAAGGCAGAGGAAAGCAAGAAGGTGGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGTTGTGGTATCGGAAGTCGCCGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTA
CATTCAACAACACAATGAAGTTGAGCTCTCTGCATTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTAAAGAACAATGGGTTGGCTACAGAGAAGAAAG
TCTTGACCTCGACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCGGAGAAATTTGATTCTCTAATGACT
ATGGCCGCAGCAACACGAGAGGTTGCCGATGCGGCTGCTGGCGAAGAAAAAAAGGCAGAGGAAAGCAAGAAGGTGGAGCAGTAG
Protein sequenceShow/hide protein sequence
MATVVVSEVAETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT
MAAATREVADAAAGEEKKAEESKKVEQ