; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005249 (gene) of Chayote v1 genome

Gene IDSed0005249
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent RNA helicase DDX11-like protein
Genome locationLG08:5759280..5760099
RNA-Seq ExpressionSed0005249
SyntenySed0005249
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]3.1e-6774.48Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M L  SISTTKKFF+KTL NFKSFFSN+YHRLPKA  PPF AGP+M KD          +VQNGSFTK NGNN V FSKTID+T   RVE+  QSIKIGA
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS-SSTFQQN
        THQRKTQEN ES SK S+ LYEYDERR+CLV KKIKEL+KLDARNVDH+LDIEE++HYYSRLTCPTYLEIV+ FFMD+FAEFCS SS+ QQN
Subjt:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS-SSTFQQN

XP_022145016.1 uncharacterized protein LOC111014544 [Momordica charantia]8.3e-5765.15Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDET--DTRRVEE-YRQSIK
        MLLRASIS TKKFF+KT+ NFKSFFS SYHRLPK   PPFAAGP+M+KDSTF+F SSQKEVQ+G F K+N +N + F   ++ET  + R V++ Y     
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDET--DTRRVEE-YRQSIK

Query:  IGATHQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPVKP
        IGATHQRK QEN +  S S   Y  DERRMCLV KKIKEL+KLD+RNVDHALDIEE++HYYSRLTCP YLEIV+KFF +IFAEF ++S+ Q    +KP
Subjt:  IGATHQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPVKP

XP_022933508.1 uncharacterized protein LOC111440909 [Cucurbita moschata]3.1e-6775Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M L  SISTTKKFFQKTL NFKSFFSN+YHRLPKA  PPF AGP+M KD          EVQNGSFTK NGNN V FSKTID+T   RVE+  QSIKIGA
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS-SSTFQQN
        THQRKTQEN ES SK S+ LYEYDERR+CLV KKIKEL+KLDARNV H+LDIEE++HYYSRLTCPTYLEIV+ FFMD+FAEFCS SS+ QQN
Subjt:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS-SSTFQQN

XP_022960595.1 uncharacterized protein LOC111461329 [Cucurbita moschata]1.1e-5664.25Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M+LRASI+ TKKFF KTL NFKSFFSN+Y RLPK A PPF+ G +MDKDS              SF K++  N V+FSKT+DET  ++VE+   SIKIG 
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPV
        THQRKTQEN         L EYDERRMCLV KK+KEL+KLDAR+VDHALDIEE++HYYSRL+CPTYLEIV+KFFMDIFAEFC++S+ QQ  P+
Subjt:  THQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPV

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]7.5e-6673.3Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M L  SISTTKKFF+KT+ NFKSFFSN+YHRLPK AAPPF AGP+M KD          EVQNGSFTK NGNN V FSKTID+T   RVE+  QSIKIGA
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQN
        THQRK+QEN ES SK S  LYEYDERR+CLV KKIKEL+KLDARNVDH+LDIEE++HYYSRLTCPTYLEIV+ FFMD+FAEFCS+S+  Q+
Subjt:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQN

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145444.0e-5765.15Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDET--DTRRVEE-YRQSIK
        MLLRASIS TKKFF+KT+ NFKSFFS SYHRLPK   PPFAAGP+M+KDSTF+F SSQKEVQ+G F K+N +N + F   ++ET  + R V++ Y     
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDET--DTRRVEE-YRQSIK

Query:  IGATHQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPVKP
        IGATHQRK QEN +  S S   Y  DERRMCLV KKIKEL+KLD+RNVDHALDIEE++HYYSRLTCP YLEIV+KFF +IFAEF ++S+ Q    +KP
Subjt:  IGATHQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPVKP

A0A6J1F4Y2 uncharacterized protein LOC1114409091.5e-6775Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M L  SISTTKKFFQKTL NFKSFFSN+YHRLPKA  PPF AGP+M KD          EVQNGSFTK NGNN V FSKTID+T   RVE+  QSIKIGA
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS-SSTFQQN
        THQRKTQEN ES SK S+ LYEYDERR+CLV KKIKEL+KLDARNV H+LDIEE++HYYSRLTCPTYLEIV+ FFMD+FAEFCS SS+ QQN
Subjt:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS-SSTFQQN

A0A6J1H9I9 uncharacterized protein LOC1114613295.3e-5764.25Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M+LRASI+ TKKFF KTL NFKSFFSN+Y RLPK A PPF+ G +MDKDS              SF K++  N V+FSKT+DET  ++VE+   SIKIG 
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPV
        THQRKTQEN         L EYDERRMCLV KK+KEL+KLDAR+VDHALDIEE++HYYSRL+CPTYLEIV+KFFMDIFAEFC++S+ QQ  P+
Subjt:  THQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPV

A0A6J1IF62 uncharacterized protein LOC1114722333.6e-6673.3Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M L  SISTTKKFF+KT+ NFKSFFSN+YHRLPK AAPPF AGP+M KD          EVQNGSFTK NGNN V FSKTID+T   RVE+  QSIKIGA
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQN
        THQRK+QEN ES SK S  LYEYDERR+CLV KKIKEL+KLDARNVDH+LDIEE++HYYSRLTCPTYLEIV+ FFMD+FAEFCS+S+  Q+
Subjt:  THQRKTQENCESSSK-STTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQN

A0A6J1JFL9 uncharacterized protein LOC1114852923.3e-5161.14Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA
        M+LRASIS+TKKFF KTL NFKSFFSN+Y RL           PKMDKDS              SF K++  N V FSKTI ET  ++VE+   SIKIGA
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGA

Query:  THQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPV
        THQRKTQEN         L  YDERRMCLV KK+KEL+KLDAR+VDHALDIEE++HYYSRL+CPTYL+IV+KFFMDIFAEFC++ + QQ  P+
Subjt:  THQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein9.0e-0928.26Show/hide
Query:  SISTTKKFFQKTLSNFKS-FFSNSYHRLPK--AAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGATH
        SI    +F +KTL + KS   S+ Y  LP       P++   +  +DS  +             TK+        S T+   DT   +   Q   +   H
Subjt:  SISTTKKFFQKTLSNFKS-FFSNSYHRLPK--AAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGATH

Query:  QRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSST
        ++K ++  E        +E  ++R   + +K+K+L  +D R+VDHALD+ E +  YS +  P YL+IV+ FF D++ EF    T
Subjt:  QRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSST

AT3G16070.1 unknown protein6.2e-1037.18Show/hide
Query:  HQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFA
        H+ + QE      K+     Y  R    + KKI E+   +  +++ ALD+EE +HYYSR++ P YL IV+KFF D+++
Subjt:  HQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFA

AT3G24535.1 unknown protein2.3e-1229.63Show/hide
Query:  MLLRASISTTKKFFQKTLSNFKSFFSN--SYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKI
        M+LR+SIS T+K FQKT+ NFKSFF N  +YH+LPK                              + T  N NN    S  I  + +   ++++   K 
Subjt:  MLLRASISTTKKFFQKTLSNFKSFFSN--SYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKI

Query:  GATHQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNV----DHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS
          T  + +        +  TL  + + ++ LV  K+KE++K+   ++     +  D+ E +H YSRL    YL++VE FFM+++++F S
Subjt:  GATHQRKTQENCESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNV----DHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTACGAGCCTCCATTTCTACTACCAAAAAATTCTTCCAAAAAACCTTATCTAACTTCAAATCTTTCTTCTCCAACAGCTACCACAGGCTGCCGAAGGCGGCGGC
GCCGCCCTTCGCCGCCGGCCCAAAAATGGATAAAGACTCAACCTTTCGTTTCAATTCATCCCAAAAAGAGGTGCAGAATGGAAGCTTTACGAAGGACAATGGCAATAATC
CAGTTCAATTTTCGAAGACGATCGACGAGACCGATACGAGAAGAGTCGAAGAATATCGACAAAGCATCAAAATTGGAGCGACCCATCAAAGGAAAACGCAAGAAAATTGC
GAATCGAGTTCAAAGAGTACAACGTTGTACGAGTACGATGAGAGGAGAATGTGTTTGGTTGTCAAGAAAATTAAAGAGTTGCAAAAATTAGACGCCAGAAATGTGGATCA
TGCTTTGGATATTGAAGAGGTTATTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATTGTTGAAAAATTCTTCATGGATATTTTTGCCGAATTTTGTTCTA
GTTCAACTTTTCAACAGAATTGCCCCGTGAAACCCATTGGGCTGAAATGA
mRNA sequenceShow/hide mRNA sequence
CCAAAATCAAACAAATTACCAAAAAATAAAAAAATAAAAACCAATGTTGCTACGAGCCTCCATTTCTACTACCAAAAAATTCTTCCAAAAAACCTTATCTAACTTCAAAT
CTTTCTTCTCCAACAGCTACCACAGGCTGCCGAAGGCGGCGGCGCCGCCCTTCGCCGCCGGCCCAAAAATGGATAAAGACTCAACCTTTCGTTTCAATTCATCCCAAAAA
GAGGTGCAGAATGGAAGCTTTACGAAGGACAATGGCAATAATCCAGTTCAATTTTCGAAGACGATCGACGAGACCGATACGAGAAGAGTCGAAGAATATCGACAAAGCAT
CAAAATTGGAGCGACCCATCAAAGGAAAACGCAAGAAAATTGCGAATCGAGTTCAAAGAGTACAACGTTGTACGAGTACGATGAGAGGAGAATGTGTTTGGTTGTCAAGA
AAATTAAAGAGTTGCAAAAATTAGACGCCAGAAATGTGGATCATGCTTTGGATATTGAAGAGGTTATTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATT
GTTGAAAAATTCTTCATGGATATTTTTGCCGAATTTTGTTCTAGTTCAACTTTTCAACAGAATTGCCCCGTGAAACCCATTGGGCTGAAATGAAAATTATTTTGTTTTAG
GATCGAAAATGGAGAATTCAAACTTATGACCTCTCAATTATTGGTTGTACACTCATGTTACTGAGTTCTCTTGCGCAATCGTCAATGGGGTTACTCCATATATTTCTTTG
TTTACTTTTTTCGTTTGTTGTAATGGAAATTTCATTCTGTGTTTATGATT
Protein sequenceShow/hide protein sequence
MLLRASISTTKKFFQKTLSNFKSFFSNSYHRLPKAAAPPFAAGPKMDKDSTFRFNSSQKEVQNGSFTKDNGNNPVQFSKTIDETDTRRVEEYRQSIKIGATHQRKTQENC
ESSSKSTTLYEYDERRMCLVVKKIKELQKLDARNVDHALDIEEVIHYYSRLTCPTYLEIVEKFFMDIFAEFCSSSTFQQNCPVKPIGLK