; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005257 (gene) of Chayote v1 genome

Gene IDSed0005257
OrganismSechium edule (Chayote v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationLG06:4447618..4451269
RNA-Seq ExpressionSed0005257
SyntenySed0005257
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-18789.34Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR-------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR       GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR-------GGGGGGGYDGAGSAPSGRYHPYGR

KAG7017783.1 Nuclear pore complex protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-18789.09Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGY+AR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR-------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR       GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR-------GGGGGGGYDGAGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]2.0e-18789.11Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR        GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]1.2e-18789.57Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR      GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]1.2e-18789.57Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR      GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein1.6e-18790.46Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK ND A NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYG VKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        M+GSQVEIKKAEPKK NPPPAPSKR+HDSRPSYSG YGDAYGEFGGGGYGG FRA GPY GARGG YGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR-GGGGGGGYDGAGSAPSGRYHPYGR
        YGA+  FSRGYDFRGGYGGPDESYGA+N+GGAP+TGGYAGSYDMG+GTGY AGGR GSFYGSR GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR-GGGGGGGYDGAGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 12.0e-18590.46Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK ND A NGEHDD  KPLNH+DDG RHDPPPHGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYG VKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA
        M+GSQVEIKKAEPKK NPPPAPSKRYH+SRPSYSG Y GDAYGEFGGGGYGG FRA GPY GARGG YGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA

Query:  RYGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR
        RYGA+  FSRGYDFRGGYGGPDESYGA+N+GGAPNTGGYA SYDMG+GTGY AGGR GSFYGSR  GGGGGYDGAGSAPSGRYHPYGR
Subjt:  RYGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 12.0e-18590.46Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK ND A NGEHDD  KPLNH+DDG RHDPPPHGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYG VKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA
        M+GSQVEIKKAEPKK NPPPAPSKRYH+SRPSYSG Y GDAYGEFGGGGYGG FRA GPY GARGG YGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA

Query:  RYGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR
        RYGA+  FSRGYDFRGGYGGPDESYGA+N+GGAPNTGGYA SYDMG+GTGY AGGR GSFYGSR  GGGGGYDGAGSAPSGRYHPYGR
Subjt:  RYGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 19.5e-18889.11Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR        GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 15.6e-18889.57Show/hide
Query:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV
        MSEN+MDSK NDAA NGEH+D  KPLNH+DDG RHDPP HGDGASAGKIF+GGL RETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYADPSV
Subjt:  MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSV

Query:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE
        VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFF QYGEVKEHQIMRDHSTSRSRGFGFITFE EQAVDDLL NGNR+E
Subjt:  VDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIE

Query:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        ++GSQVEIKKAEPKK NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRA GPY GARGG YGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSAR
Subjt:  MSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR
        YGA  GFSRGYDFRGGYGGPDESYGA+N+  APNTGGYAGSYDMG+GTGYP+GGR GSFYGSR      GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  YGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A11.2e-3338.01Show/hide
Query:  KIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+FIGGLS ETT      HF Q+G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEF
          +E   +D+F QYG+++  +IM D  + + RGF F+TF++  +VD ++       ++G   E++KA  K+     + S+R      ++ GG G  +G  
Subjt:  SVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEF

Query:  GGGGYGGGFRASGPYGGARGGSYGGYGG-----NDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRG-GYGGPDESYGAFNNGGAPNTGGY
           G GG F   G +GG+RGG  GGYGG     N F   G YG GG G        G S  YG+ G   +GY  +G GYGG   SY ++NNGG    GG 
Subjt:  GGGGYGGGFRASGPYGGARGGSYGGYGG-----NDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRG-GYGGPDESYGAFNNGGAPNTGGY

Query:  AGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSG
        +GS + G G  Y   G   +   + G   GG + G  S P G
Subjt:  AGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSG

P21522 Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog1.1e-3136.71Show/hide
Query:  HGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK
        HG+     K+FIGGL   TT     +HF Q+GEI D V+MKD KT   RGFGF+TY+   +VD       H ++G+ VE KR +P+      +     KK
Subjt:  HGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK

Query:  IFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGG
        +FVGGI   ++E++ +D+F QYG V    I+ D  T + RGF F+ F++   VD +  + N  ++ G  +++KKA PK   P                GG
Subjt:  IFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGG

Query:  YGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTG
        +G   G++GG   GGG    G +GGA     G  GG D  G G  G GG   +     MG   RYG  GG S G+           S   +N+G  P + 
Subjt:  YGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAFNNGGAPNTG

Query:  GYAGSYDMGVGTGYPAG--GRGGSF---YGSRG--GGGGGGYDGAG
        G+ G Y    G G   G  G GGS    Y  RG  GGGGGGY   G
Subjt:  GYAGSYDMGVGTGYPAG--GRGGSF---YGSRG--GGGGGGYDGAG

Q6URK4 Heterogeneous nuclear ribonucleoprotein A38.4e-3238.29Show/hide
Query:  HDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+FIGGLS ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRP
           KKIFVGGI    +E   +D+F +YG+++  ++M D  + + RGF F+TF++   VD ++       ++G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRP

Query:  SYSGGYGDAYGEFGGG----GYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAF
          SG +    G FGGG    G GG F   G YGG  GGS G YGG D  GY  +G  G G Y   P  GYS+R G  GG     +  GGYGG    Y  +
Subjt:  SYSGGYGDAYGEFGGG----GYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAF

Query:  NNGGAPNTGGYAGS---YDMGVGTGYPAGG----RGGSFYG-SRGGGGGGGYDGAGSAPSGRY
        N GG    G Y G     D G  +G         +GGSF G S G   GGGY   G   SG Y
Subjt:  NNGGAPNTGGYAGS---YDMGVGTGYPAGG----RGGSFYG-SRGGGGGGGYDGAGSAPSGRY

Q8BG05 Heterogeneous nuclear ribonucleoprotein A38.4e-3238.29Show/hide
Query:  HDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+FIGGLS ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRP
           KKIFVGGI    +E   +D+F +YG+++  ++M D  + + RGF F+TF++   VD ++       ++G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRP

Query:  SYSGGYGDAYGEFGGG----GYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAF
          SG +    G FGGG    G GG F   G YGG  GGS G YGG D  GY  +G  G G Y   P  GYS+R G  GG     +  GGYGG    Y  +
Subjt:  SYSGGYGDAYGEFGGG----GYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAF

Query:  NNGGAPNTGGYAGS---YDMGVGTGYPAGG----RGGSFYG-SRGGGGGGGYDGAGSAPSGRY
        N GG    G Y G     D G  +G         +GGSF G S G   GGGY   G   SG Y
Subjt:  NNGGAPNTGGYAGS---YDMGVGTGYPAGG----RGGSFYG-SRGGGGGGGYDGAGSAPSGRY

Q8W034 Heterogeneous nuclear ribonucleoprotein 11.0e-3735.66Show/hide
Query:  GKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+F+GG+S ET   +  +HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNP----------PP
          KTKKIFVGG+P ++ ++EF+ +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    ++SG QVE+K+A PK  NP            
Subjt:  --KTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGF
           + Y  +  SY G             G+    +G  GYG G+       G+ G  YG YGG      GYG   T G GA    P  GY +  G A   
Subjt:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGF

Query:  SRGYDFRGGYGGPDESYGAFNN-----GGAPNTGGYAGSYDMGVGTGYPAGGRGG----SFYGSRGG---GGGGGYDGAGSAPSGRY
        S       GYG P    GA ++     G AP T   +G  + G G G  +G   G    + YG  GG   GGG    G+G    G Y
Subjt:  SRGYDFRGGYGGPDESYGAFNN-----GGAPNTGGYAGSYDMGVGTGYPAGGRGG----SFYGSRGG---GGGGGYDGAGSAPSGRY

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-5241.5Show/hide
Query:  ASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+F+GG+S ETT+  F  +FG++GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDA
        G+P  ++EDE K++F  YG++ EHQIM DH T RSRGFGF+TF+ E +VD L ++G   E+   QVEIK+AEPK+                    G  ++
Subjt:  GIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDA

Query:  YGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMY-GTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAFNNG-GAPNTGGY
        +  +G         ASG Y   +  SY G    D+S Y  Y G GG GAY  +  +  +  YG  GG+  GY    GYGG       FN G GA      
Subjt:  YGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMY-GTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAFNNG-GAPNTGGY

Query:  AGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPY
           Y +     Y  G   G+  G+ G   G G    GS P  RYHPY
Subjt:  AGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-6968.72Show/hide
Query:  RHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSRD
        R+D    GDGAS GKIFIGGL ++TT+  F KHFG+YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+D
Subjt:  RHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSRD

Query:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKK
         KTKKIFVGGIP++V EDE KDFF++YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN I+M+ +QV + K
Subjt:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-8454.77Show/hide
Query:  RHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSRD
        R+D    GDGAS GKIFIGGL ++TT+  F KHFG+YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+D
Subjt:  RHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSRD

Query:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRP
         KTKKIFVGGIP++V EDE KDFF++YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN I+M+ +QVEIKKAEPKK      PS   H    
Subjt:  FKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPPAPSKRYHDSRP

Query:  SYSGGYGDAYGEFGG--GGYG---GGFRASG----PYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAG-GF-SRGYDFRGGYGGP
        S +  Y    G +GG  GGYG   G  R+ G     Y G  G   G  G     GY  YG G +G YR +P +GYS+R+G  G GF   GY  RGG G  
Subjt:  SYSGGYGDAYGEFGG--GGYG---GGFRASG----PYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAG-GF-SRGYDFRGGYGGP

Query:  DESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR
          +Y  +  GG    GGY G    G G  Y +GG GGS+ G+      GG  G G + S RYHPY R
Subjt:  DESYGAFNNGGAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-3935.66Show/hide
Query:  GKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+F+GG+S ET   +  +HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNP----------PP
          KTKKIFVGG+P ++ ++EF+ +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    ++SG QVE+K+A PK  NP            
Subjt:  --KTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGF
           + Y  +  SY G             G+    +G  GYG G+       G+ G  YG YGG      GYG   T G GA    P  GY +  G A   
Subjt:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGF

Query:  SRGYDFRGGYGGPDESYGAFNN-----GGAPNTGGYAGSYDMGVGTGYPAGGRGG----SFYGSRGG---GGGGGYDGAGSAPSGRY
        S       GYG P    GA ++     G AP T   +G  + G G G  +G   G    + YG  GG   GGG    G+G    G Y
Subjt:  SRGYDFRGGYGGPDESYGAFNN-----GGAPNTGGYAGSYDMGVGTGYPAGGRGG----SFYGSRGG---GGGGGYDGAGSAPSGRY

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.1e-11159.91Show/hide
Query:  MDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI
        MD    +  I  E  DP    + +DD  +  P   G   SAGKIF+GGL+RETTSA+F+KHFG+YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI

Query:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQ
        +D HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEFK+FF Q+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LL  GNRIE+SG+Q
Subjt:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQ

Query:  VEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGY---GGGFRASGPYGGARGGSYGGYGGNDFSGYGMYG-TGGMGAYREDPSMGYSARY
        VEIKKAEPKKPN    PSKR+ DSR ++ GGYGD YG   GGGY   GG +++ G YGG R G YGGYGG +F GYG  G  GG+G YR +P++GYS RY
Subjt:  VEIKKAEPKKPNPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGY---GGGFRASGPYGGARGGSYGGYGGNDFSGYGMYG-TGGMGAYREDPSMGYSARY

Query:  -GAAGGFSR-GYDF---------------------RGGYGGPDESY---------GAFNNG-GAPNTGGY--AGSYDM-GVG----TGYPAGG---RGGS
         G  GG++R GY                        GGYGGP  SY         G +  G G    GGY   G YDM GVG     GY AGG    GGS
Subjt:  -GAAGGFSR-GYDF---------------------RGGYGGPDESY---------GAFNNG-GAPNTGGY--AGSYDM-GVG----TGYPAGG---RGGS

Query:  FYGSRGGGGGGGYDGAGSAPSGRYHPYGR
        FYG  GGGG GGY G G   SGRYHPYGR
Subjt:  FYGSRGGGGGGGYDGAGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACGCCATGGATTCCAAGGTCAATGATGCTGCTATCAATGGCGAACACGACGACCCCAACAAGCCCTTGAACCATCAAGACGATGGGATTAGACACGACCC
TCCCCCTCATGGCGACGGTGCCAGTGCTGGGAAAATCTTCATTGGAGGTTTATCGCGGGAAACGACTTCCGCACAATTTGTTAAGCATTTTGGTCAGTATGGGGAAATCA
CCGACTCTGTTATAATGAAGGACCGGAAGACGGGTCATCCCCGTGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACACATT
ATTAATGGGAAACAAGTGGAAATCAAGCGAACAATCCCTAAAGGATCTTCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTTGA
TGAAGATGAGTTCAAGGACTTCTTTTCCCAATACGGTGAGGTTAAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGATCCCGTGGGTTTGGTTTTATTACATTTG
AAAACGAGCAAGCAGTTGATGATCTCTTGACAAATGGAAACAGGATTGAGATGTCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAACCGAAAAAGCCAAATCCACCTCCA
GCCCCTTCGAAGAGATACCATGATTCAAGGCCAAGTTATAGTGGTGGCTATGGGGATGCCTATGGGGAGTTTGGCGGTGGCGGGTATGGTGGTGGTTTTAGGGCAAGTGG
TCCATATGGTGGTGCTAGAGGTGGCAGCTATGGAGGTTACGGCGGAAATGACTTTAGTGGCTATGGAATGTATGGTACTGGTGGCATGGGAGCTTACAGGGAAGACCCCT
CGATGGGGTATTCTGCTCGTTATGGAGCAGCAGGAGGGTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCATTTAACAATGGA
GGTGCTCCTAATACTGGCGGGTACGCAGGTAGCTACGATATGGGTGTTGGCACTGGGTACCCTGCTGGTGGGAGAGGAGGTTCCTTCTATGGCAGTAGAGGTGGAGGAGG
AGGAGGCGGATACGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAG
mRNA sequenceShow/hide mRNA sequence
CCCGTCTCGAAATTGTAGCCGATTGCGAATTCTAGGGTTTAAGGGAGGCGCCATTGTTGCGAACTCGGCGCTGCGAATCCAACATTCATCATCAACACAGGTTCATCTAG
GGCTTAATCCATTTCCCTCATTCAATTCTCTTCTCTTCAAGCTCCTCTTCTGTTCCTTTCATGTCGGAAAACGCCATGGATTCCAAGGTCAATGATGCTGCTATCAATGG
CGAACACGACGACCCCAACAAGCCCTTGAACCATCAAGACGATGGGATTAGACACGACCCTCCCCCTCATGGCGACGGTGCCAGTGCTGGGAAAATCTTCATTGGAGGTT
TATCGCGGGAAACGACTTCCGCACAATTTGTTAAGCATTTTGGTCAGTATGGGGAAATCACCGACTCTGTTATAATGAAGGACCGGAAGACGGGTCATCCCCGTGGATTC
GGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACACATTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATCCCTAAAGGATCTTC
CAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTTGATGAAGATGAGTTCAAGGACTTCTTTTCCCAATACGGTGAGGTTAAGGAAC
ACCAGATTATGCGTGACCACTCCACTAGTCGATCCCGTGGGTTTGGTTTTATTACATTTGAAAACGAGCAAGCAGTTGATGATCTCTTGACAAATGGAAACAGGATTGAG
ATGTCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAACCGAAAAAGCCAAATCCACCTCCAGCCCCTTCGAAGAGATACCATGATTCAAGGCCAAGTTATAGTGGTGGCTA
TGGGGATGCCTATGGGGAGTTTGGCGGTGGCGGGTATGGTGGTGGTTTTAGGGCAAGTGGTCCATATGGTGGTGCTAGAGGTGGCAGCTATGGAGGTTACGGCGGAAATG
ACTTTAGTGGCTATGGAATGTATGGTACTGGTGGCATGGGAGCTTACAGGGAAGACCCCTCGATGGGGTATTCTGCTCGTTATGGAGCAGCAGGAGGGTTCAGCAGAGGT
TATGATTTTAGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCATTTAACAATGGAGGTGCTCCTAATACTGGCGGGTACGCAGGTAGCTACGATATGGGTGTTGG
CACTGGGTACCCTGCTGGTGGGAGAGGAGGTTCCTTCTATGGCAGTAGAGGTGGAGGAGGAGGAGGCGGATACGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATC
CTTATGGACGGTAGTTAGTTGTGATGAAAGCTTTTGTTAATTTATGTGCTACAAGGACGGAGGCAACGCCGATTAGCTCCTAGATAAAATTGTGCGCCTCTTACCATCTC
AAGATTTCTGCCATGTTCACCAGGGTCACAATTTTCAAAGATTTAGAATTTGACTGTACAACTGATTGACTAACTTGCTGGAGATTGTGCTAAAATTATGTATTACCTAT
ATACGCCATTATTTTATCCATTTTGCTATCAACATTAGTTTTATTGACTTGACTATCTTTGAGAATGTTTAATTAATTGGAATATGTTGGTTTTGTTTA
Protein sequenceShow/hide protein sequence
MSENAMDSKVNDAAINGEHDDPNKPLNHQDDGIRHDPPPHGDGASAGKIFIGGLSRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHI
INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFENEQAVDDLLTNGNRIEMSGSQVEIKKAEPKKPNPPP
APSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRASGPYGGARGGSYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGAAGGFSRGYDFRGGYGGPDESYGAFNNG
GAPNTGGYAGSYDMGVGTGYPAGGRGGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR