CuGenDBv2

Gene ID	Sed0005281
Organism	Sechium edule (Chayote v1)
Description	Protein LITTLE ZIPPER like
Genome location	LG05:6830390..6831255
RNA-Seq Expression	Sed0005281
Synteny	Sed0005281
Gene Ontology terms	NA
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-31

78.79

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK
        MC I+AT   LFHQIHTS   R LKR KLQVQRL+SRRRS EEK GKDIE+KNLQLYLENQTII ENEKLR+KANILH+ENLALMTEFHKKFPH    K
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK

XP_022159679.1 protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]

3.4e-27

76.84

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL
        MC ISAT+++ FHQIHTS   R LKR KLQVQRLT RRR  EEK+GKDIE+KNLQLYLENQTII ENEKLR++ANILH+ENLALMTE  KKF HL
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL

XP_022159680.1 protein LITTLE ZIPPER 2-like isoform X2 [Momordica charantia]

4.8e-29

77.89

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL
        MC ISAT+++ FHQIHTS   R LKR KLQVQRLTSRRR  EEK+GKDIE+KNLQLYLENQTII ENEKLR++ANILH+ENLALMTE  KKF HL
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL

XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]

4.5e-27

73.74

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK
        MC ISAT + LFHQI TS   R  KR KLQV RLT  RR CEEKLGKDIE+KNLQLYL+NQTII EN+KLR+KANILH+EN+ALMTEF KKFPHL   K
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK

XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]

2.1e-29

78.79

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK
        MC I+AT   LFHQIHTS   R LKR KLQVQRL SRRRS EEK GKDIE+KNLQLYLENQTII ENEKLR+KANILH+ENLALMTEFHKKFPH    K
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKF8 Uncharacterized protein

4.1e-26

70.71

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK
        MC +SAT + LFH I +S   R  KR   QV RLT  RR CEEKLGKDIE+KNLQLYLENQTII ENEKLR+KANILH+ENLAL+TEF KKFPHL   K
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK

A0A5B7C8X5 Uncharacterized protein (Fragment)

5.7e-20

59.04

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Query:  IHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYH
        +H+S++ +  KR K+QV RL+ R+R C+EK+GKD+E+KNL+LY+EN TI+ ENEKLR+KAN+LH+ENL+L++EF KKF H +H
Subjt:  IHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYH

A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X2

2.3e-29

77.89

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL
        MC ISAT+++ FHQIHTS   R LKR KLQVQRLTSRRR  EEK+GKDIE+KNLQLYLENQTII ENEKLR++ANILH+ENLALMTE  KKF HL
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL

A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X1

1.7e-27

76.84

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL
        MC ISAT+++ FHQIHTS   R LKR KLQVQRLT RRR  EEK+GKDIE+KNLQLYLENQTII ENEKLR++ANILH+ENLALMTE  KKF HL
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHL

A0A6J1E3C5 protein LITTLE ZIPPER 1-like

2.2e-27

73.74

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Query:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK
        MC ISAT + LFHQI TS   R  KR KLQV RLT  RR CEEKLGKDIE+KNLQLYL+NQTII EN+KLR+KANILH+EN+ALMTEF KKFPHL   K
Subjt:  MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK

SwissProt top hits

e value

%identity

Alignment

F4IG60 Protein LITTLE ZIPPER 1

9.1e-07

49.21

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Query:  LQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKK
        +++ RL+ RRR   E+  K +EM NL+LY+ENQ II ENEKL++KA +LH+EN  L +    K
Subjt:  LQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKK

Q9LZX5 Protein LITTLE ZIPPER 2

4.8e-08

40.7

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Query:  TDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKF
        TD           K +   +  L++  LT RRR  +E+  K++EM+NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  TDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

6.5e-08

49.21

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Query:  LQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKK
        +++ RL+ RRR   E+  K +EM NL+LY+ENQ II ENEKL++KA +LH+EN  L +    K
Subjt:  LQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKK

AT3G60890.1 protein binding

3.4e-09

40.7

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Query:  TDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKF
        TD           K +   +  L++  LT RRR  +E+  K++EM+NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  TDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKF

AT3G60890.2 protein binding

5.9e-09

41.86

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Query:  TDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKF
        TD           K +   +  L++  LTSRRR    K  K++EM+NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  TDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKF

Sequences

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CDS sequence

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ATGTGCAATATCAGTGCAACAGACAACACTCTGTTTCATCAAATCCATACTTCCAGCAAAAGCAGAGGTTTAAAAAGGTTCAAACTTCAAGTTCAGAGGCTTACCAGTAG
GAGGAGATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGATGAAGAATCTGCAGCTGTATTTGGAGAACCAGACCATAATTGGAGAGAATGAGAAGTTGAGACAGAAAG
CTAATATCCTTCATGAAGAGAATTTGGCCTTAATGACTGAGTTTCACAAGAAATTTCCACATTTATATCATACAAAATGA

mRNA sequence

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GCAACTTCTAAACATTATTCTGCAAGAAAGAAAGATCATAATGTGCAATATCAGTGCAACAGACAACACTCTGTTTCATCAAATCCATACTTCCAGCAAAAGCAGAGGTT
TAAAAAGGTTCAAACTTCAAGTTCAGAGGCTTACCAGTAGGAGGAGATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGATGAAGAATCTGCAGCTGTATTTGGAGAAC
CAGACCATAATTGGAGAGAATGAGAAGTTGAGACAGAAAGCTAATATCCTTCATGAAGAGAATTTGGCCTTAATGACTGAGTTTCACAAGAAATTTCCACATTTATATCA
TACAAAATGATTGGAATCATCTCCCTTAGTGATTTCTAAATGTATTGAACTCTTTATTCAACATATATGTGGAATTTATGAAGAATTCATATAACTTGATAAAACTAGAG
GGTAATTTATATAGTAGTGAGAGGTTGGGGAGTTGAAAATCTTTTAATTTTCAACATTTTTCTCTGTTACAAACCAGCAG

Protein sequence

Show/hide protein sequence

MCNISATDNTLFHQIHTSSKSRGLKRFKLQVQRLTSRRRSCEEKLGKDIEMKNLQLYLENQTIIGENEKLRQKANILHEENLALMTEFHKKFPHLYHTK

Sed0005281 (gene) of Chayote v1 genome