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Sed0005318 (gene) of Chayote v1 genome

Gene IDSed0005318
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:33376888..33377199
RNA-Seq ExpressionSed0005318
SyntenySed0005318
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050069.1 hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa]5.2e-1853.54Show/hide
Query:  AAKLALVFLVCAAVFA---SLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCAL
        A KL LVFLVC A+ A   ++A   A APSP    +F F  C  FI EA  CV DV    IA HPSCC+AI  LNDCAP++ +KIP  +MD+IKK+C+L
Subjt:  AAKLALVFLVCAAVFA---SLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCAL

KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]4.7e-1954Show/hide
Query:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV
        KL LVF VC A+ A   +A   A APS P  A   S  GCTSFI+EA  CV+DV    +A HPSCC+A   LNDC+P+ L+ IP  +M LIK +CALWGV
Subjt:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]1.6e-1954Show/hide
Query:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV
        KL LVFLVC A+ A   +A   A+AP+ P  A +FS  GCTSFI+EA  C+VDV    +A HPSCC+A   LNDC+ + L+ IP  +M LIK +CALWGV
Subjt:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV

KAG6589812.1 hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1752.58Show/hide
Query:  KLALVFLVCAAVFASLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV
        KLA   LVC A+ AS     A+AP P  A  FS FGCTS ++E   CVVDV  + +A HPSCC AI  LN C+   L+ +P  +M LIK VCALWGV
Subjt:  KLALVFLVCAAVFASLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]2.1e-1954Show/hide
Query:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV
        KL LVF VC A+ A   +A   A APS P  A + S  GCTSFI+EA  CV+DV    +A HPSCC+A   LNDC+P+ L+ IP  +M LIK +CALWGV
Subjt:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV

TrEMBL top hitse value%identityAlignment
A0A0A0LTD6 Uncharacterized protein5.2e-1652Show/hide
Query:  KLALVFLVCAAVFAS--LAKVDAIAPSPL----EASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCAL
        +LA+VFLVC  + A    A+  A APSP+    +  D SF  C  FI EA  CVVDV    +ASHPSCC+AI +LNDCAPQ+ + IP  +MD+IKK+C L
Subjt:  KLALVFLVCAAVFAS--LAKVDAIAPSPL----EASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCAL

A0A5A7U483 Uncharacterized protein2.3e-1954Show/hide
Query:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV
        KL LVF VC A+ A   +A   A APS P  A   S  GCTSFI+EA  CV+DV    +A HPSCC+A   LNDC+P+ L+ IP  +M LIK +CALWGV
Subjt:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV

A0A5A7U9A1 Uncharacterized protein2.5e-1853.54Show/hide
Query:  AAKLALVFLVCAAVFA---SLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCAL
        A KL LVFLVC A+ A   ++A   A APSP    +F F  C  FI EA  CV DV    IA HPSCC+AI  LNDCAP++ +KIP  +MD+IKK+C+L
Subjt:  AAKLALVFLVCAAVFA---SLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCAL

A0A5D3CFS6 Uncharacterized protein6.1e-1747.52Show/hide
Query:  KLALVFLVCAAVFAS--LAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGVT
        KL LV LVC A+ AS   A+   +A +   + DFS F C SF+ +A  CV+DV    +A HPSCCEAI  L+DC+ Q L+ IP  +M L+K +CA WGV+
Subjt:  KLALVFLVCAAVFAS--LAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGVT

Query:  L
        +
Subjt:  L

A0A5D3CG41 Uncharacterized protein1.0e-1954Show/hide
Query:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV
        KL LVF VC A+ A   +A   A APS P  A + S  GCTSFI+EA  CV+DV    +A HPSCC+A   LNDC+P+ L+ IP  +M LIK +CALWGV
Subjt:  KLALVFLVCAAVFA--SLAKVDAIAPS-PLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAAAGTTAGCACTTGTATTTCTAGTATGCGCAGCCGTTTTCGCATCATTGGCGAAGGTCGATGCGATAGCGCCTAGTCCATTAGAAGCAAGCGATTTCTCTTT
CTTTGGATGCACATCGTTCATTGCGGAGGCTGCGACATGTGTGGTCGATGTGTTTAATAAAACGATTGCTTCTCATCCTTCTTGTTGCGAAGCCATTAAAAATCTCAACG
ATTGTGCTCCTCAATTACTCGAAAAAATCCCTCCTGTTGAGATGGATTTGATTAAGAAGGTTTGTGCTTTGTGGGGCGTTACATTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAAAGTTAGCACTTGTATTTCTAGTATGCGCAGCCGTTTTCGCATCATTGGCGAAGGTCGATGCGATAGCGCCTAGTCCATTAGAAGCAAGCGATTTCTCTTT
CTTTGGATGCACATCGTTCATTGCGGAGGCTGCGACATGTGTGGTCGATGTGTTTAATAAAACGATTGCTTCTCATCCTTCTTGTTGCGAAGCCATTAAAAATCTCAACG
ATTGTGCTCCTCAATTACTCGAAAAAATCCCTCCTGTTGAGATGGATTTGATTAAGAAGGTTTGTGCTTTGTGGGGCGTTACATTGCCTTGA
Protein sequenceShow/hide protein sequence
MAAKLALVFLVCAAVFASLAKVDAIAPSPLEASDFSFFGCTSFIAEAATCVVDVFNKTIASHPSCCEAIKNLNDCAPQLLEKIPPVEMDLIKKVCALWGVTLP