; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005338 (gene) of Chayote v1 genome

Gene IDSed0005338
OrganismSechium edule (Chayote v1)
DescriptionPre-mRNA cleavage factor Im 25 kDa subunit
Genome locationLG02:51715912..51719467
RNA-Seq ExpressionSed0005338
SyntenySed0005338
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0006378 - mRNA polyadenylation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005849 - mRNA cleavage factor complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR016706 - Cleavage/polyadenylation specificity factor subunit 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV81269.1 NUDIX_2 domain-containing protein [Cephalotus follicularis]2.2e-10390.5Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPK+EKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++SAA  PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKK+F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

XP_004133873.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis sativus]2.8e-10390.55Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S + QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

XP_022147484.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Momordica charantia]1.3e-10391.04Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S A QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

XP_022924789.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita moschata]8.3e-10390.55Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S A QPDWQIGECVA WWRPNFETVMYPYCPPHITK KECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

XP_031259563.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Pistacia vera]6.3e-10389.55Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPK+EKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S A  PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKK+F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A1Q3CM00 Pre-mRNA cleavage factor Im 25 kDa subunit1.1e-10390.5Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPK+EKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++SAA  PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKK+F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

A0A5D3D0Y8 Pre-mRNA cleavage factor Im 25 kDa subunit1.4e-10390.55Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S + QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

A0A6J1D153 Pre-mRNA cleavage factor Im 25 kDa subunit6.2e-10491.04Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S A QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

A0A6J1GGL6 Pre-mRNA cleavage factor Im 25 kDa subunit6.2e-10491.04Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S A QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

A0A6J1IEE3 Pre-mRNA cleavage factor Im 25 kDa subunit6.2e-10491.04Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M T+PVVNTYPLSSYTFG KEPKLEKDTSVADRLARMK+NYMKEGMRTSVEAIL+VQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKL 
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G++S A QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKK+FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM+T
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
O43809 Cleavage and polyadenylation specificity factor subunit 52.5e-6258.16Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        +T    +N YPL++YTFG KEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LLLQ+G TF KLPGG L PGE+E++GLKR +T  LG
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWF
                 DW I +C+  WWRPNFE   YPY P HITKPKE KK+F+V L E+  FAVPKN KL+A PLFELYDN   YGPIIS++P  LSRF F
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWF

Q3ZCA2 Cleavage and polyadenylation specificity factor subunit 52.5e-6258.16Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        +T    +N YPL++YTFG KEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LLLQ+G TF KLPGG L PGE+E++GLKR +T  LG
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWF
                 DW I +C+  WWRPNFE   YPY P HITKPKE KK+F+V L E+  FAVPKN KL+A PLFELYDN   YGPIIS++P  LSRF F
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWF

Q6DJE4 Cleavage and polyadenylation specificity factor subunit 55.1e-6358.67Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        +T    +N YPL++YTFG KEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LLLQ+G TF KLPGG L PGE+E++GLKR +T  LG
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWF
               Q DW I +C+  WWRPNFE   YPY P HITKPKE KK+F+V L E+  FAVPKN KL+A PLFELYDN   YGPIIS++P  LSRF F
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWF

Q7T3C6 Cleavage and polyadenylation specificity factor subunit 52.5e-6256.93Show/hide
Query:  TAIATAMTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRK
        T     +T    +N YPL++YTFG KEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LLLQ+G TF KLPGG L PGE+E++GLKR 
Subjt:  TAIATAMTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRK

Query:  LTSKLGGSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRF
        +T  LG       + DW I +C+  WWRPNFE   YPY P HITKPKE KK+F+V L E+  FAVPKN KL+A PLFELYDN   YGPIIS++P  LSRF
Subjt:  LTSKLGGSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRF

Query:  WF
         F
Subjt:  WF

Q8GXS3 Pre-mRNA cleavage factor Im 25 kDa subunit 28.0e-10185.57Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M  + VVNTYPLS+Y+FG KEPKLEKDTSVADRLARMKINYMKEGMRTSVE IL+VQEHNHPHILLLQIGNTFCKLPGGRLKPGENE DGLKRKLTSKLG
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G +SAA  PDW +GECVA WWRPNFET+MYPYCPPHITKPKECK+++IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM++
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        +
Subjt:  T

Arabidopsis top hitse value%identityAlignment
AT4G25550.1 Cleavage/polyadenylation specificity factor, 25kDa subunit5.7e-10285.57Show/hide
Query:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG
        M  + VVNTYPLS+Y+FG KEPKLEKDTSVADRLARMKINYMKEGMRTSVE IL+VQEHNHPHILLLQIGNTFCKLPGGRLKPGENE DGLKRKLTSKLG
Subjt:  MTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLG

Query:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT
        G +SAA  PDW +GECVA WWRPNFET+MYPYCPPHITKPKECK+++IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYGP+ISTIP  LSRF FNM++
Subjt:  GSSSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVT

Query:  T
        +
Subjt:  T

AT4G29820.1 homolog of CFIM-253.7e-6155.15Show/hide
Query:  VVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGGSSSA
        +V+ YPLSSY FG+KE    KD  ++DR+ R+K NY   G+RT VEA+L+V+   HPH+LLLQ  N+  KLPGGRL+PGE++I+GLKRKL SKL  + + 
Subjt:  VVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGGSSSA

Query:  AYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMV
             +++GEC+ +WWRPNFET+MYP+ PP+I  PKEC K+F+V L   + F VPKN KLLAVPL +L++N + YGPI+S IP  LS+F FNM+
Subjt:  AYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCGATAGCGACGGCGATGACGACGGCGCCGGTGGTGAATACGTATCCACTTTCAAGCTACACATTCGGCAACAAAGAGCCGAAGCTCGAGAAGGACACATC
CGTTGCTGATCGCCTTGCTCGCATGAAAATCAACTATATGAAGGAAGGCATGAGAACAAGTGTTGAAGCTATTCTGGTGGTGCAAGAACATAACCATCCCCATATTCTAC
TACTCCAAATTGGAAATACCTTTTGTAAGCTTCCTGGGGGTCGGTTGAAGCCTGGAGAAAATGAAATTGATGGTTTAAAGAGGAAACTGACCAGCAAACTAGGTGGAAGT
TCATCTGCCGCCTACCAGCCTGATTGGCAGATTGGCGAATGTGTGGCTATTTGGTGGAGACCAAATTTTGAAACTGTCATGTATCCTTATTGTCCTCCTCATATTACAAA
ACCCAAGGAATGTAAAAAGATTTTTATCGTTCACTTGTCTGAAAGAGAGTACTTCGCCGTTCCTAAAAATTTGAAGCTGCTTGCAGTTCCTTTGTTTGAGCTCTATGACA
ATGTTCAGCGATATGGACCGATTATATCGACGATCCCGCACCATCTTTCCAGGTTTTGGTTCAACATGGTCACCACACGAGATTGCAACACATGA
mRNA sequenceShow/hide mRNA sequence
AGTTTACCAGTTGTCGTCTTGTCCTCTGTTTTCCGTTTCAAGTATCCGTAGAGTTGAACGGAACGGAGCCATGGCGACGGCGATAGCGACGGCGATGACGACGGCGCCGG
TGGTGAATACGTATCCACTTTCAAGCTACACATTCGGCAACAAAGAGCCGAAGCTCGAGAAGGACACATCCGTTGCTGATCGCCTTGCTCGCATGAAAATCAACTATATG
AAGGAAGGCATGAGAACAAGTGTTGAAGCTATTCTGGTGGTGCAAGAACATAACCATCCCCATATTCTACTACTCCAAATTGGAAATACCTTTTGTAAGCTTCCTGGGGG
TCGGTTGAAGCCTGGAGAAAATGAAATTGATGGTTTAAAGAGGAAACTGACCAGCAAACTAGGTGGAAGTTCATCTGCCGCCTACCAGCCTGATTGGCAGATTGGCGAAT
GTGTGGCTATTTGGTGGAGACCAAATTTTGAAACTGTCATGTATCCTTATTGTCCTCCTCATATTACAAAACCCAAGGAATGTAAAAAGATTTTTATCGTTCACTTGTCT
GAAAGAGAGTACTTCGCCGTTCCTAAAAATTTGAAGCTGCTTGCAGTTCCTTTGTTTGAGCTCTATGACAATGTTCAGCGATATGGACCGATTATATCGACGATCCCGCA
CCATCTTTCCAGGTTTTGGTTCAACATGGTCACCACACGAGATTGCAACACATGAAGTCCATATTTGCACCAGTGACGTATAATCTTACTTATTTGGCTGAGGTATTCTT
ATTTGGCTTAGTTAGAACTTGAAGACATTCTTTTTTCTTTTTAATTCTAAATTTTGTGGATGGCTTTCTGAGCCTAAAGCCCAAGAAAAATTTATGCTTCTGATCAGAGC
AGCTAAATGAAAATCGAATGACTATTGTTGGTATTTTGTTTTTCAAAAGCGTCAAACCAAAAAACATTTTCGATAATCGTTTTTTATTTTAAAAATTCAAAACAACACTT
GATTAATGTTTGTAATTTTTAATTAAAAAAAAGCAAATTATTTTTATAGTATTATTCATCTTTTTTTATGTATGTCTTGACTATTCAATTTATAAAAGTGT
Protein sequenceShow/hide protein sequence
MATAIATAMTTAPVVNTYPLSSYTFGNKEPKLEKDTSVADRLARMKINYMKEGMRTSVEAILVVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGGS
SSAAYQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKIFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPIISTIPHHLSRFWFNMVTTRDCNT