; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005358 (gene) of Chayote v1 genome

Gene IDSed0005358
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG01:67688401..67689345
RNA-Seq ExpressionSed0005358
SyntenySed0005358
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042716.1 late embryogenesis abundant protein [Cucumis melo var. makuwa]5.2e-5760.85Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR
        M +D+Q+FPLAH+QA  K+DEE+ L TF  L KERSNK FIY+F+  V L+VA L+FAL+VLRV+SP+I+LSAVS+  FSL    NSS   SL+L+ +A 
Subjt:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
        F VDN NFGPF+FD+ +VG ++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS  +   G+L+LS FVKLRG VRLIHVFR+RVSSEI CS+NLDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

KAG6579535.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]6.5e-6061.32Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAAR
        M DD+Q+FP+AH+QA  KSDEE  ++L TF AL+KERSNK FIYVF+A V L+VA L+FAL+VLRV+SP +H S++SVA FSL   + +S SLNLTL A+
Subjt:  MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
         +VDN NFGPF+FDHASVGF++AGA+VG+ TTG GR  AKGTK ++VTV   A+N+S+D  +  +LNLS F  LRG VRLIH+FR+R SSEI CS+ LDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

XP_008437349.1 PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]2.3e-5760.85Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR
        M +D+Q+FPLAH+QA  K+DEE+ L TF  L KERSNK FIY+F+  V L+VA L+FAL+VLRV+SP+I+LSAVS+  FSL    NSS   SL+L+ +A 
Subjt:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
        F+VDN NFGPF+FD+ +VG ++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS  +   G+L+LS FVKLRG VRLIHVFR+RVSSEI CS+NLDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

XP_022969774.1 uncharacterized protein LOC111468875 [Cucurbita maxima]2.5e-5960.85Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAAR
        MADD+Q+FP+AH++A  KSDEE  ++L TF AL+KERSNK FIYVF+A V L+VA L+FAL+VLRV+SP +H S++SVA FSL   + +S SLNLT+ A+
Subjt:  MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
         +VDN NFGPF+FD+ASVGF++AGA+VG+ TTG GRA AKGTK ++VTV+  A N+S+D  +  +LNLS F  LRG VRLIH+FR+R SSEI CS+ LDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

XP_038875090.1 late embryogenesis abundant protein At1g64065 [Benincasa hispida]7.0e-6260.95Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFS
        M +D+Q+FPLAH+QA  KSDEE+ L TF  LRKERSNK FIYVF+  V L+VA L+FAL+VLRV+SP+I LS+VS+  FS+   + +S SLNLT+ A F+
Subjt:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFS

Query:  VDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNS
        VDN NFGPF+FD+ +VG ++ GA+VGE++TG GRA AKG+K ++VT+E  A+N+SSDS +LG+LNL+ FVKLRG VRLIH+FR+R SSEI CS+NLD+N+
Subjt:  VDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNS

Query:  RRILPGWVCD
         +I   WVC+
Subjt:  RRILPGWVCD

TrEMBL top hitse value%identityAlignment
A0A0A0KQT7 LEA_2 domain-containing protein2.1e-5658.49Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLHRNS-----SSLNLTLAAR
        M +D+Q+FPLAH+QA  K +EE+ L TF  LRKERSNK FIY+F+  V L+VA L+FAL+VLRV+SP+I LS++S    SL  N+     +SLNL+  A 
Subjt:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLHRNS-----SSLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
        F+VDN NFGPF+FD+ +VG ++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS  +   G+LN S FVKLRG VRLIH+FR+RVSSEI CS+NLDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

A0A1S3ATY3 late embryogenesis abundant protein At1g640651.1e-5760.85Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR
        M +D+Q+FPLAH+QA  K+DEE+ L TF  L KERSNK FIY+F+  V L+VA L+FAL+VLRV+SP+I+LSAVS+  FSL    NSS   SL+L+ +A 
Subjt:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
        F+VDN NFGPF+FD+ +VG ++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS  +   G+L+LS FVKLRG VRLIHVFR+RVSSEI CS+NLDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

A0A5A7TL68 Late embryogenesis abundant protein2.5e-5760.85Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR
        M +D+Q+FPLAH+QA  K+DEE+ L TF  L KERSNK FIY+F+  V L+VA L+FAL+VLRV+SP+I+LSAVS+  FSL    NSS   SL+L+ +A 
Subjt:  MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
        F VDN NFGPF+FD+ +VG ++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS  +   G+L+LS FVKLRG VRLIHVFR+RVSSEI CS+NLDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

A0A6J1H2C0 uncharacterized protein LOC1114597391.9e-4952.83Show/hide
Query:  MADDAQTFPLAHFQAQKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSV
        M + + +FPL H QA               + E SNK FIY+F++ V L VA L+F+L+VLRV+SPTI LS++SV  FS+   + +SSSLNLTL A FS+
Subjt:  MADDAQTFPLAHFQAQKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSV

Query:  DNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNSR
        DN NFGPF FD+ +V F++ G +VGER+TGGGRA AKGT  ++V+VE    NVSSD    G+LN+S F K  G + LIHV RKR+ SEI CS+NLDLN+ 
Subjt:  DNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNSR

Query:  RILPGWVCDSPH
        +I P WVCD+ H
Subjt:  RILPGWVCDSPH

A0A6J1I3M2 uncharacterized protein LOC1114688751.2e-5960.85Show/hide
Query:  MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAAR
        MADD+Q+FP+AH++A  KSDEE  ++L TF AL+KERSNK FIYVF+A V L+VA L+FAL+VLRV+SP +H S++SVA FSL   + +S SLNLT+ A+
Subjt:  MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAAR

Query:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL
         +VDN NFGPF+FD+ASVGF++AGA+VG+ TTG GRA AKGTK ++VTV+  A N+S+D  +  +LNLS F  LRG VRLIH+FR+R SSEI CS+ LDL
Subjt:  FSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDL

Query:  NSRRILPGWVCD
        N+ +I   WVC+
Subjt:  NSRRILPGWVCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.3e-1027.37Show/hide
Query:  EEKNLKTFHALRKERSNKAFI-YVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLHRN----SSSLNLTLAARFSVDNPNFGPFHFDHASVGF
        +  N  T   LR++R+ K  I +    I+L+A+  ++ A  + +   PT  + +V+V       N       LNLTL    S+ NPN   F +D +S   
Subjt:  EEKNLKTFHALRKERSNKAFI-YVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLHRN----SSSLNLTLAARFSVDNPNFGPFHFDHASVGF

Query:  LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDL-----GVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNSRRI
         + G ++GE      R AA+ T  +++T+   A  + S+++ L     GV+ L+ FVK+ G V ++ +F+ +V S   C +++ ++ R +
Subjt:  LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDL-----GVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNSRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGACGCCCAGACCTTCCCCTTAGCGCACTTTCAAGCTCAGAAATCCGACGAAGAGAAAAACCTCAAAACATTCCACGCTCTCCGGAAGGAGCGCTCCAACAA
AGCCTTCATCTACGTCTTCGCCGCCATCGTCCTCCTCGCCGTCGCCGCCCTCCTCTTCGCCCTCCTCGTCCTCCGCGTCTCCTCCCCAACCATCCACCTCTCCGCCGTCT
CCGTCGCCGGATTCTCCCTCCACCGCAACTCCTCTTCCCTCAACCTCACCCTCGCCGCTCGCTTCTCCGTCGACAACCCCAACTTCGGTCCCTTCCACTTCGACCACGCA
TCCGTCGGTTTCCTCCACGCCGGCGCCCTCGTCGGAGAGCGCACCACAGGCGGCGGGAGGGCGGCGGCGAAGGGCACGAAGGCGGTGGACGTCACGGTGGAAGGGTTTGC
GAGGAACGTCAGCTCGGATTCGAGGGATTTGGGGGTTTTGAATCTGAGTGGGTTCGTGAAATTGCGAGGTGGGGTGAGGTTGATTCATGTTTTCAGGAAGAGGGTTTCGT
CGGAGATTCGTTGTTCGGTGAATCTCGATTTGAATTCTCGTCGGATTCTGCCTGGTTGGGTTTGCGACTCACCGCATCCATGA
mRNA sequenceShow/hide mRNA sequence
CCTTCCTTCTCTGCAACAACAATGGCGGACGACGCCCAGACCTTCCCCTTAGCGCACTTTCAAGCTCAGAAATCCGACGAAGAGAAAAACCTCAAAACATTCCACGCTCT
CCGGAAGGAGCGCTCCAACAAAGCCTTCATCTACGTCTTCGCCGCCATCGTCCTCCTCGCCGTCGCCGCCCTCCTCTTCGCCCTCCTCGTCCTCCGCGTCTCCTCCCCAA
CCATCCACCTCTCCGCCGTCTCCGTCGCCGGATTCTCCCTCCACCGCAACTCCTCTTCCCTCAACCTCACCCTCGCCGCTCGCTTCTCCGTCGACAACCCCAACTTCGGT
CCCTTCCACTTCGACCACGCATCCGTCGGTTTCCTCCACGCCGGCGCCCTCGTCGGAGAGCGCACCACAGGCGGCGGGAGGGCGGCGGCGAAGGGCACGAAGGCGGTGGA
CGTCACGGTGGAAGGGTTTGCGAGGAACGTCAGCTCGGATTCGAGGGATTTGGGGGTTTTGAATCTGAGTGGGTTCGTGAAATTGCGAGGTGGGGTGAGGTTGATTCATG
TTTTCAGGAAGAGGGTTTCGTCGGAGATTCGTTGTTCGGTGAATCTCGATTTGAATTCTCGTCGGATTCTGCCTGGTTGGGTTTGCGACTCACCGCATCCATGAACCCTA
ATTTGTTTATTCATTCTTTCAATTTTTTTTTAATTTTTTTTGGTATTAGTTTGAATTTTGTTATTCATTAAACAGATATTGGATTAGATGACTACAAACTTAGACAGATT
TTAATATACTCTTTTATTATAACAAATATTTCATCATACCATTATGATAGTTGTTTCCTTTTTATTTGTGCACATTTATGTTGTAATGACACCTAAACGTCCTTATGTTT
ACTATTTAAGATTTGAGTTTTCTCAAGGGTATGTTTGAGGTATCTGTTTGATTATGATAGACGAA
Protein sequenceShow/hide protein sequence
MADDAQTFPLAHFQAQKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLHRNSSSLNLTLAARFSVDNPNFGPFHFDHA
SVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNSRRILPGWVCDSPHP