; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005383 (gene) of Chayote v1 genome

Gene IDSed0005383
OrganismSechium edule (Chayote v1)
DescriptionMental retardation GTPase activating protein
Genome locationLG06:38506102..38508697
RNA-Seq ExpressionSed0005383
SyntenySed0005383
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145633.1 uncharacterized protein LOC101205687 [Cucumis sativus]1.0e-3543.3Show/hide
Query:  DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKW
        DEPE +LREWAA+       A SRRFS   + R F   + +  S++ ++                 A Y  +N        SLNSWECFSLDGFTLNSKW
Subjt:  DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKW

Query:  NEVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAS
        NE EKYI                                                              +K++DANA+TR+VG +ST T VGS SPSPAS
Subjt:  NEVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAS

Query:  TPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        TPPI +RALKRC  E+DSP SNSK+T  +++ +RE K+E  KEE+  +E +AEEK+ KQG C+SW MKKK KE+QRSRRKRFLSHLKL+ C
Subjt:  TPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

XP_022935276.1 uncharacterized protein LOC111442214 [Cucurbita moschata]5.5e-3745.83Show/hide
Query:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV
        DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            +  A Y  +N        SLNSWECFSLDGFTLNSKWNE 
Subjt:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV

Query:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP
        EKYI                                                               KKVDANAMTR+VG +ST T VGS SPSPASTPP
Subjt:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP

Query:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        I +RALKRC  E++SP SNSKVT + E  +RE K+E  KEE+  RE +AEEK  KQG C+SW MK+K KE+QRSRRKRFLSHLKL+ C
Subjt:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

XP_022983933.1 uncharacterized protein LOC111482408 [Cucurbita maxima]8.0e-3645.3Show/hide
Query:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV
        DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            +  A Y  +N        SLNSWECFSLDGFTLNSKWNE 
Subjt:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV

Query:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP
        EKYI                                                               KKVDANAMTR+VG +ST   VGS SPSPASTPP
Subjt:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP

Query:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEE-QRETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        I +RALKRC  E++SP SNSKVT + E  +RE ++E  KE+  RE MAEEK  KQG C+SW MK+K KE+QRSRRKRFLSHLKL+ C
Subjt:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEE-QRETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

XP_023526566.1 uncharacterized protein LOC111790032 [Cucurbita pepo subsp. pepo]2.7e-3645.49Show/hide
Query:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV
        DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            +  A Y  +N        SLNSWECFSLDGFTLNSKWNE 
Subjt:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV

Query:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP
        EKYI                                                               KKVDANAMTR+VG +ST   VGS SPSPASTPP
Subjt:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP

Query:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        I +RALKRC  E++SP SNSKVT + E  +RE K+E  KEE+  RE +AEEK  KQG C+SW MK+K KE+QRSRRKRFLSHLKL+ C
Subjt:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

XP_038876978.1 uncharacterized protein LOC120069317 [Benincasa hispida]1.2e-3644.83Show/hide
Query:  DEPELNLREWAAQ-------AISRRFSRVPFSRF---------------------FFSFSLAMDSSLLSLIWA-QYFISNSLNSWECFSLDGFTLNSKWN
        DEPE +LREWAA+       AISRRFS      F                      + F   +D +  S   A +   + SLNSWECFSLDGFTLNSKWN
Subjt:  DEPELNLREWAAQ-------AISRRFSRVPFSRF---------------------FFSFSLAMDSSLLSLIWA-QYFISNSLNSWECFSLDGFTLNSKWN

Query:  EVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAST
        E EKYI                                                              +KKVDANAMTR+VG +ST   VGS+SPSPAST
Subjt:  EVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAST

Query:  PPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        PPI ERALKRC  E+DSP SNSK+T + E  +RE K+E  KEE+  RE + EEK  KQG C+SW MKKK KE+QRSRRKRFLSHLKL+ C
Subjt:  PPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

TrEMBL top hitse value%identityAlignment
A0A0A0L6V9 Uncharacterized protein5.0e-3643.3Show/hide
Query:  DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKW
        DEPE +LREWAA+       A SRRFS   + R F   + +  S++ ++                 A Y  +N        SLNSWECFSLDGFTLNSKW
Subjt:  DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKW

Query:  NEVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAS
        NE EKYI                                                              +K++DANA+TR+VG +ST T VGS SPSPAS
Subjt:  NEVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAS

Query:  TPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        TPPI +RALKRC  E+DSP SNSK+T  +++ +RE K+E  KEE+  +E +AEEK+ KQG C+SW MKKK KE+QRSRRKRFLSHLKL+ C
Subjt:  TPPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

A0A1S3CFH4 uncharacterized protein LOC1035001398.6e-3643.45Show/hide
Query:  EPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKWN
        EPE +LREWAA+       A SRRFS   + R F   + +  S++ ++                 A Y  +N        SLNSWECFSLDGFTLNSKWN
Subjt:  EPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKWN

Query:  EVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAST
        E EKYI                                                              +K+VDANA+TR+VG +ST T VGS+SPSPAST
Subjt:  EVEKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAST

Query:  PPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        PPI +RALKRC  E+DSP SNSK+T  +++ +RE K+E  KEE+  +E +AEEK+ KQG C+SW MKKK KE+QRSRRKRFLSHLKL+ C
Subjt:  PPIPERALKRCAFEQDSPGSNSKVT--SQIERREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

A0A6J1F439 uncharacterized protein LOC1114422142.7e-3745.83Show/hide
Query:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV
        DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            +  A Y  +N        SLNSWECFSLDGFTLNSKWNE 
Subjt:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV

Query:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP
        EKYI                                                               KKVDANAMTR+VG +ST T VGS SPSPASTPP
Subjt:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP

Query:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        I +RALKRC  E++SP SNSKVT + E  +RE K+E  KEE+  RE +AEEK  KQG C+SW MK+K KE+QRSRRKRFLSHLKL+ C
Subjt:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ--RETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

A0A6J1J941 uncharacterized protein LOC1114824083.9e-3645.3Show/hide
Query:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV
        DEPE +LREWAA+A       ISRRFS   + R F   + +  S++ S            +  A Y  +N        SLNSWECFSLDGFTLNSKWNE 
Subjt:  DEPELNLREWAAQA-------ISRRFSRVPFSRFFFSFSLAMDSSLLS------------LIWAQYFISN--------SLNSWECFSLDGFTLNSKWNEV

Query:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP
        EKYI                                                               KKVDANAMTR+VG +ST   VGS SPSPASTPP
Subjt:  EKYI--------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPASTPP

Query:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEE-QRETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC
        I +RALKRC  E++SP SNSKVT + E  +RE ++E  KE+  RE MAEEK  KQG C+SW MK+K KE+QRSRRKRFLSHLKL+ C
Subjt:  IPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEE-QRETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC

A0A6J1KAU1 uncharacterized protein LOC111492625 isoform X11.9e-3543.2Show/hide
Query:  DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKW
        DEPE +LREWAA+       AISRRFS   + R F   + ++ S++ ++                 A Y  +N        SLNSWECFSLDGFTLNSKW
Subjt:  DEPELNLREWAAQ-------AISRRFSRVPFSRFFFSFSLAMDSSLLSLIW---------------AQYFISN--------SLNSWECFSLDGFTLNSKW

Query:  NEVEKYI-------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAST
        NE EKYI                                                             + KV+AN MTR+VG +ST  +VGS+SPSPAST
Subjt:  NEVEKYI-------------------------------------------------------------QKKVDANAMTREVGNESTSTIVGSDSPSPAST

Query:  PPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ-----RETMAEEKWKKQGRCMSWMM-KKKHKEKQRSRRKRFLSHLKLRRC
        PPI ERALKRC  E+DSP SNSK T + E  RRE  +E  KEE+     RET+AEEK+ KQG C+SWMM KKK KE++RSRRKR + HLKL+ C
Subjt:  PPIPERALKRCAFEQDSPGSNSKVTSQIE--RREQKKEEEKEEQ-----RETMAEEKWKKQGRCMSWMM-KKKHKEKQRSRRKRFLSHLKLRRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACCGGAGTTGAATCTCCGTGAATGGGCGGCTCAGGCCATTTCCCGGCGGTTCTCCAGGGTACCCTTTTCCAGGTTTTTCTTCTCTTTTTCTCTGGCCATGGA
TTCTTCTCTTCTTTCGCTTATCTGGGCTCAGTACTTTATTTCCAATTCGCTTAACAGCTGGGAATGTTTTTCTCTTGATGGTTTTACTTTGAATTCCAAGTGGAATGAAG
TCGAGAAGTATATTCAGAAGAAAGTGGATGCCAATGCCATGACCAGAGAGGTGGGAAATGAAAGTACATCAACGATCGTTGGTTCGGATAGTCCTAGTCCTGCTTCGACG
CCTCCCATCCCGGAGAGAGCTTTAAAGAGATGCGCATTCGAACAAGACTCGCCTGGTTCCAACTCTAAAGTTACTTCCCAGATAGAGAGGAGAGAGCAAAAGAAAGAAGA
AGAAAAGGAAGAACAAAGAGAAACAATGGCAGAAGAGAAGTGGAAGAAGCAAGGAAGATGCATGTCATGGATGATGAAGAAGAAGCACAAAGAGAAACAGAGATCAAGAA
GAAAGAGGTTCCTTTCTCATCTAAAACTAAGAAGGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAACCGGAGTTGAATCTCCGTGAATGGGCGGCTCAGGCCATTTCCCGGCGGTTCTCCAGGGTACCCTTTTCCAGGTTTTTCTTCTCTTTTTCTCTGGCCATGGA
TTCTTCTCTTCTTTCGCTTATCTGGGCTCAGTACTTTATTTCCAATTCGCTTAACAGCTGGGAATGTTTTTCTCTTGATGGTTTTACTTTGAATTCCAAGTGGAATGAAG
TCGAGAAGTATATTCAGAAGAAAGTGGATGCCAATGCCATGACCAGAGAGGTGGGAAATGAAAGTACATCAACGATCGTTGGTTCGGATAGTCCTAGTCCTGCTTCGACG
CCTCCCATCCCGGAGAGAGCTTTAAAGAGATGCGCATTCGAACAAGACTCGCCTGGTTCCAACTCTAAAGTTACTTCCCAGATAGAGAGGAGAGAGCAAAAGAAAGAAGA
AGAAAAGGAAGAACAAAGAGAAACAATGGCAGAAGAGAAGTGGAAGAAGCAAGGAAGATGCATGTCATGGATGATGAAGAAGAAGCACAAAGAGAAACAGAGATCAAGAA
GAAAGAGGTTCCTTTCTCATCTAAAACTAAGAAGGTGCTGA
Protein sequenceShow/hide protein sequence
MDEPELNLREWAAQAISRRFSRVPFSRFFFSFSLAMDSSLLSLIWAQYFISNSLNSWECFSLDGFTLNSKWNEVEKYIQKKVDANAMTREVGNESTSTIVGSDSPSPAST
PPIPERALKRCAFEQDSPGSNSKVTSQIERREQKKEEEKEEQRETMAEEKWKKQGRCMSWMMKKKHKEKQRSRRKRFLSHLKLRRC