; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005389 (gene) of Chayote v1 genome

Gene IDSed0005389
OrganismSechium edule (Chayote v1)
DescriptionRNA-dependent RNA polymerase
Genome locationContig00107:71755..72732
RNA-Seq ExpressionSed0005389
SyntenySed0005389
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR008686 - RNA-dependent RNA polymerase, mitoviral


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1835825.1 unnamed protein product [Ananas comosus var. bracteatus]1.3e-4753.14Show/hide
Query:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIE
        V  +YPC+RF+TLARVGG G+R +ARLDH R+ +  RV A+YT+        + +GRG    PYLR  I+  LR EMRPKE  LIPDDLF  E +KDF+E
Subjt:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIE

Query:  WSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPI
        WS+LRSW++ WL Y   Y  TA++PDV I  FF   +  R WR+   D  L  FGL+W+VYDLVA+KG+ FR+PI
Subjt:  WSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPI

KAA8537222.1 hypothetical protein F0562_029700 [Nyssa sinensis]4.6e-3757.45Show/hide
Query:  NRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSILRSW----MKEWLAYSHRYYGTAMQPDV
        NR   RVY +  KPL GP LEWWLGRG    PYLR +II+FLRE+MRPKELRLIPDDLFA  +VKD      L  +    +++WLAY+  YYGTA+  D+
Subjt:  NRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSILRSW----MKEWLAYSHRYYGTAMQPDV

Query:  QISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKG
        +I SFF+T VL+ +W+I  KD NLT FGL+WRVYDL+   G
Subjt:  QISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKG

KAB8477474.1 hypothetical protein FH972_025340 [Carpinus fangiana]6.7e-11395.67Show/hide
Query:  YPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSIL
        YPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRG    PYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF+EWSIL
Subjt:  YPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSIL

Query:  RSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGT
        RSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIE KDANLTRFGL+WRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGT
Subjt:  RSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGT

Query:  TQTRAGNG
        TQ RAG G
Subjt:  TQTRAGNG

KAF3950993.1 hypothetical protein CMV_023311 [Castanea mollissima]3.5e-4590.2Show/hide
Query:  MAVNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF
        MAVNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLE WLGRG    PYLRA IIHFLREEMRPKELRLIPDDLFAT+KV D 
Subjt:  MAVNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF

Query:  IE
        +E
Subjt:  IE

KAF9601036.1 hypothetical protein IFM89_015021 [Coptis chinensis]3.3e-4341.7Show/hide
Query:  MAVNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAG-PTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKD
        +A+  +Y C+RFSTL R+GG GY+ L +L   R+R   R+++M  K L G   L  WLG+G    PY+   +   + ++++PK+LR+ PD+LF TEKV+ 
Subjt:  MAVNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAG-PTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKD

Query:  FIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVL-SNGPWLLGGISGQS
          E++ LR WMKEWLAY   Y   AM PD  + S FD  +    W+ + KD NL +FGL+W+++DLV   G+ FR PIL+       +G WLLGGI G+S
Subjt:  FIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVL-SNGPWLLGGISGQS

Query:  FMVQSRGTTQTRAGNGKREWAGTPTCRKKSKP---LCHSCTAGVKPR
        ++V++ G  Q RA +G     G      KS P   L H  T GV  R
Subjt:  FMVQSRGTTQTRAGNGKREWAGTPTCRKKSKP---LCHSCTAGVKPR

TrEMBL top hitse value%identityAlignment
A0A5J5B5X9 Uncharacterized protein2.2e-3757.45Show/hide
Query:  NRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSILRSW----MKEWLAYSHRYYGTAMQPDV
        NR   RVY +  KPL GP LEWWLGRG    PYLR +II+FLRE+MRPKELRLIPDDLFA  +VKD      L  +    +++WLAY+  YYGTA+  D+
Subjt:  NRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSILRSW----MKEWLAYSHRYYGTAMQPDV

Query:  QISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKG
        +I SFF+T VL+ +W+I  KD NLT FGL+WRVYDL+   G
Subjt:  QISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKG

A0A5N6L0Z4 Uncharacterized protein3.3e-11395.67Show/hide
Query:  YPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSIL
        YPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRG    PYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF+EWSIL
Subjt:  YPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSIL

Query:  RSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGT
        RSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIE KDANLTRFGL+WRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGT
Subjt:  RSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGT

Query:  TQTRAGNG
        TQ RAG G
Subjt:  TQTRAGNG

A0A6M9TTY9 ATP-synt_ab_N domain-containing protein2.2e-3235.15Show/hide
Query:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGP--TLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF
        + H+Y  + FS L R+ GAGYRV A L   +++   R+ A   KP       LEWW+GRG    PYL+   + +L +E++PKE+RL P+ L   +  ++ 
Subjt:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGP--TLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF

Query:  IEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDL-VAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSF
        +E +++  WM++WL +   Y+  +  PD  +  FFD  +   SW+ +  D+N+ +FG++W+VYD+ VA    +    +L+   V++  PW+LGG+SG  F
Subjt:  IEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDL-VAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSF

Query:  MV
        M+
Subjt:  MV

A0A6V7PYJ7 Uncharacterized protein6.3e-4853.14Show/hide
Query:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIE
        V  +YPC+RF+TLARVGG G+R +ARLDH R+ +  RV A+YT+        + +GRG    PYLR  I+  LR EMRPKE  LIPDDLF  E +KDF+E
Subjt:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIE

Query:  WSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPI
        WS+LRSW++ WL Y   Y  TA++PDV I  FF   +  R WR+   D  L  FGL+W+VYDLVA+KG+ FR+PI
Subjt:  WSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPI

A0A7T7FPE9 Uncharacterized protein4.4e-3335.64Show/hide
Query:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGP--TLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF
        +NH+Y  + FS L R+ GAGYRV A L   +++   R+ A   KP       LEWW+GRG    PYL+   + +L +E++PKE+RL P+ L   +  ++ 
Subjt:  VNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGP--TLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDF

Query:  IEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDL-VAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSF
        +E +++  WM++WL +   Y+  +  PD  +  FFD  +   SW+ +  D+N+ +FG++W+VYD+ VA    +    +L+   V++  PW+LGG+SG  F
Subjt:  IEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDL-VAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSF

Query:  MV
        M+
Subjt:  MV

SwissProt top hitse value%identityAlignment
P92562 Uncharacterized mitochondrial protein AtMg013103.8e-1028.44Show/hide
Query:  LREEMRPKELRLIPDD-LFATEKVKDFIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSF
        L+ +++PK L+L P D +F  E   +  E++  R+W++ WL +   YY   +  D  +S FF+  +   SW+    D  + +FGL+W   D+   + V +
Subjt:  LREEMRPKELRLIPDD-LFATEKVKDFIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSF

Query:  RIPILEGHL
        +  +  GH+
Subjt:  RIPILEGHL

Arabidopsis top hitse value%identityAlignment
AT2G07691.1 unknown protein2.7e-1128.44Show/hide
Query:  LREEMRPKELRLIPDD-LFATEKVKDFIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSF
        L+ +++PK L+L P D +F  E   +  E++  R+W++ WL +   YY   +  D  +S FF+  +   SW+    D  + +FGL+W   D+   + V +
Subjt:  LREEMRPKELRLIPDD-LFATEKVKDFIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSF

Query:  RIPILEGHL
        +  +  GH+
Subjt:  RIPILEGHL

ATMG01310.1 hypothetical protein2.7e-1128.44Show/hide
Query:  LREEMRPKELRLIPDD-LFATEKVKDFIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSF
        L+ +++PK L+L P D +F  E   +  E++  R+W++ WL +   YY   +  D  +S FF+  +   SW+    D  + +FGL+W   D+   + V +
Subjt:  LREEMRPKELRLIPDD-LFATEKVKDFIEWSILRSWMKEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSF

Query:  RIPILEGHL
        +  +  GH+
Subjt:  RIPILEGHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGAACCACAGGTATCCTTGCCGAAGGTTCTCAACATTGGCCCGTGTCGGGGGTGCGGGATATCGAGTCCTGGCGCGCTTAGACCATTACCGGAACCGGCACGA
TAGTCGGGTGTACGCCATGTACACGAAGCCTCTGGCCGGCCCCACCTTAGAGTGGTGGTTGGGTCGAGGTCCTACGAGGTACCCCTATCTTCGGGCTTATATTATTCACT
TCTTACGTGAAGAAATGCGTCCAAAGGAGCTAAGGTTGATACCAGATGACCTCTTTGCCACCGAGAAGGTCAAGGACTTTATCGAGTGGTCAATCTTACGGTCGTGGATG
AAGGAGTGGCTAGCGTACTCTCACAGGTACTACGGTACTGCTATGCAACCGGATGTCCAGATAAGTAGCTTCTTTGACACGGCTGTGCTTATGCGATCCTGGAGGATCGA
GCCGAAGGATGCAAATCTAACTCGCTTCGGTCTTATGTGGAGAGTTTATGACCTTGTCGCGGTCAAAGGAGTGTCTTTCCGGATTCCAATTCTTGAAGGGCACCTGGTCT
TGAGTAATGGACCATGGCTACTTGGAGGAATCTCCGGTCAGTCTTTTATGGTACAGTCCCGGGGTACTACCCAGACTCGGGCTGGTAATGGAAAGAGAGAATGGGCCGGT
ACTCCTACCTGTAGGAAAAAGAGCAAACCTTTATGCCATAGCTGCACAGCAGGAGTGAAACCAAGGAGTTCTCGCTCAGTAGTTAACCTTGTTGTTACGTCCGCTTTGAG
TTCAAGGGTGGCATCCTCAGCAAGGAAGGGTCCTCTTGGAAATGTACCCTGCTCCTTCTACGGATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGAACCACAGGTATCCTTGCCGAAGGTTCTCAACATTGGCCCGTGTCGGGGGTGCGGGATATCGAGTCCTGGCGCGCTTAGACCATTACCGGAACCGGCACGA
TAGTCGGGTGTACGCCATGTACACGAAGCCTCTGGCCGGCCCCACCTTAGAGTGGTGGTTGGGTCGAGGTCCTACGAGGTACCCCTATCTTCGGGCTTATATTATTCACT
TCTTACGTGAAGAAATGCGTCCAAAGGAGCTAAGGTTGATACCAGATGACCTCTTTGCCACCGAGAAGGTCAAGGACTTTATCGAGTGGTCAATCTTACGGTCGTGGATG
AAGGAGTGGCTAGCGTACTCTCACAGGTACTACGGTACTGCTATGCAACCGGATGTCCAGATAAGTAGCTTCTTTGACACGGCTGTGCTTATGCGATCCTGGAGGATCGA
GCCGAAGGATGCAAATCTAACTCGCTTCGGTCTTATGTGGAGAGTTTATGACCTTGTCGCGGTCAAAGGAGTGTCTTTCCGGATTCCAATTCTTGAAGGGCACCTGGTCT
TGAGTAATGGACCATGGCTACTTGGAGGAATCTCCGGTCAGTCTTTTATGGTACAGTCCCGGGGTACTACCCAGACTCGGGCTGGTAATGGAAAGAGAGAATGGGCCGGT
ACTCCTACCTGTAGGAAAAAGAGCAAACCTTTATGCCATAGCTGCACAGCAGGAGTGAAACCAAGGAGTTCTCGCTCAGTAGTTAACCTTGTTGTTACGTCCGCTTTGAG
TTCAAGGGTGGCATCCTCAGCAAGGAAGGGTCCTCTTGGAAATGTACCCTGCTCCTTCTACGGATGCTAG
Protein sequenceShow/hide protein sequence
MAVNHRYPCRRFSTLARVGGAGYRVLARLDHYRNRHDSRVYAMYTKPLAGPTLEWWLGRGPTRYPYLRAYIIHFLREEMRPKELRLIPDDLFATEKVKDFIEWSILRSWM
KEWLAYSHRYYGTAMQPDVQISSFFDTAVLMRSWRIEPKDANLTRFGLMWRVYDLVAVKGVSFRIPILEGHLVLSNGPWLLGGISGQSFMVQSRGTTQTRAGNGKREWAG
TPTCRKKSKPLCHSCTAGVKPRSSRSVVNLVVTSALSSRVASSARKGPLGNVPCSFYGC