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Sed0005443 (gene) of Chayote v1 genome

Gene IDSed0005443
OrganismSechium edule (Chayote v1)
DescriptionProtein-ribulosamine 3-kinase
Genome locationLG04:35974904..35976889
RNA-Seq ExpressionSed0005443
SyntenySed0005443
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574778.1 hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4665.9Show/hide
Query:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQL-----ADAE
        E  AAPSLPDL+ SL+QASFMAKQL STSNP HLLQIY+SL QANL LS+FLS  H+PQS P           +SAT+A     G++PMQ+     ADAE
Subjt:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQL-----ADAE

Query:  DTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
          S G I++VEEKMKDCFIKNKR+KR+LSPSAAA+AEERR+H D+RF +AT K FDP  ERLRALDLISQFHA
Subjt:  DTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

XP_008460165.1 PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo]2.8e-4868.45Show/hide
Query:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP----------TSATTADGDDPMQL-----ADAEDTSHG
        E  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS P           S+ T+   DPMQ+     ADA   S G
Subjt:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP----------TSATTADGDDPMQL-----ADAEDTSHG

Query:  AIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
         I++VEEKMKDCFIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Subjt:  AIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

XP_011656677.1 uncharacterized protein LOC105435764 [Cucumis sativus]1.8e-4766.48Show/hide
Query:  EAMEE-EAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP--------------TSATTADGDDPMQL-----A
        EAM +  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS P               S+ T+   DPMQ+     A
Subjt:  EAMEE-EAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP--------------TSATTADGDDPMQL-----A

Query:  DAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
        DA   S G I++VEEKMKDCFIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Subjt:  DAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

XP_022156139.1 uncharacterized protein LOC111023095 [Momordica charantia]5.9e-5169.59Show/hide
Query:  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQLADAEDT
        EAM E A+PSLPDL+ SL+QASFMAKQLPSTSNP+HLLQIY+SL QAN  LS+FLS T FPQS P           +SAT+A    DG++PMQ+ D E  
Subjt:  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQLADAEDT

Query:  SHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
        S G+I++VEEKMKDCFIKNKR+KRQLSPS AA+AEERRLH DDRF  AT K FDPR ERLRALDLISQFHA
Subjt:  SHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

XP_038876419.1 uncharacterized protein LOC120068853 [Benincasa hispida]7.3e-4968.18Show/hide
Query:  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQL-----A
        EAM E A PSL DL+ SL+QASFMAKQLPS+SNPTHLLQIY+SL QANL LSLFLS T F QS P           +SAT+A    DG++PMQ+     A
Subjt:  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQL-----A

Query:  DAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
        DAE  S G I++VEEKMKDCFIKNKR+KRQLSPSAAA+AEERR+H D+RF  ATPK FDP  ERLRALDLISQFHA
Subjt:  DAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

TrEMBL top hitse value%identityAlignment
A0A0A0KBH1 Uncharacterized protein8.7e-4866.48Show/hide
Query:  EAMEE-EAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP--------------TSATTADGDDPMQL-----A
        EAM +  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS P               S+ T+   DPMQ+     A
Subjt:  EAMEE-EAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP--------------TSATTADGDDPMQL-----A

Query:  DAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
        DA   S G I++VEEKMKDCFIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Subjt:  DAEDTSHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

A0A1S3CC06 uncharacterized protein LOC1034990581.3e-4868.45Show/hide
Query:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP----------TSATTADGDDPMQL-----ADAEDTSHG
        E  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS P           S+ T+   DPMQ+     ADA   S G
Subjt:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP----------TSATTADGDDPMQL-----ADAEDTSHG

Query:  AIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
         I++VEEKMKDCFIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Subjt:  AIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

A0A5D3DLF5 Putative AP2-like ethylene-responsive transcription factor SNZ1.3e-4868.45Show/hide
Query:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP----------TSATTADGDDPMQL-----ADAEDTSHG
        E  A PSL DL+ SLDQA+FMAKQLPSTSNPTHLLQIY+SL QANL LSLFLS TH PQS P           S+ T+   DPMQ+     ADA   S G
Subjt:  EEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP----------TSATTADGDDPMQL-----ADAEDTSHG

Query:  AIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
         I++VEEKMKDCFIKNKR+KRQLSPSAAA+AEERR+HP +RF  ATPK FDP  ERLRALDLISQFHA
Subjt:  AIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

A0A6J1DSG3 uncharacterized protein LOC1110230952.9e-5169.59Show/hide
Query:  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQLADAEDT
        EAM E A+PSLPDL+ SL+QASFMAKQLPSTSNP+HLLQIY+SL QAN  LS+FLS T FPQS P           +SAT+A    DG++PMQ+ D E  
Subjt:  EAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHP-----------TSATTA----DGDDPMQLADAEDT

Query:  SHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
        S G+I++VEEKMKDCFIKNKR+KRQLSPS AA+AEERRLH DDRF  AT K FDPR ERLRALDLISQFHA
Subjt:  SHGAIQLVEEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA

A0A7J6GXD4 Uncharacterized protein1.5e-3657.76Show/hide
Query:  MEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSA-TTADGDDPMQLAD-------AEDTSHGAIQLVE
        MEEEA PSLPDLI S++QA   AKQLP T+NPTHLLQIYSSLRQA+  LS FLS   FPQ    +A T  +G++PMQ+ +        +D+  G++  VE
Subjt:  MEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSA-TTADGDDPMQLAD-------AEDTSHGAIQLVE

Query:  EKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFH
        EKM+DCFIKNKR KR LSPSA A+AEERRL+ D  +     + FDP A RLRAL+L+ QFH
Subjt:  EKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01840.1 unknown protein5.2e-2145.81Show/hide
Query:  DLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSATTADGDDPMQLAD--------AEDTSHGAIQLVEEKMKDCFIKN
        +LI SL+QA+ MA+Q+ +T     LLQI SSLR A+ RLS FL+     ++  + ++     +PMQL +        AE+  + AI+ VEEKM++CFI+N
Subjt:  DLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSATTADGDDPMQLAD--------AEDTSHGAIQLVEEKMKDCFIKN

Query:  KRLKRQLSPSAAAV---AEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA
        KRLKR LSPS+A V   A E R   D  F +      DP A +LRALDLI QFHA
Subjt:  KRLKRQLSPSAAAV---AEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAAGCATCAGTTGGCTTGAATCTCGATAGTGAGAGAAGCAAGACGGAAGCCATGGAAGAAGAAGCAGCACCTTCACTGCCCGACCTAATTCAGTCGCTGGATCA
AGCATCGTTCATGGCGAAGCAGCTTCCATCTACATCCAACCCGACCCATCTCCTTCAAATCTACAGTTCCCTCCGCCAAGCCAACCTCCGCCTCTCCCTCTTCCTCTCCC
CAACTCACTTCCCCCAATCTCACCCCACTTCCGCAACCACCGCCGACGGCGACGACCCGATGCAGCTCGCCGACGCCGAAGACACTTCCCATGGCGCGATTCAATTGGTG
GAGGAGAAGATGAAGGATTGCTTTATCAAGAACAAGCGGCTCAAGCGTCAACTCTCGCCATCCGCCGCGGCCGTGGCGGAGGAAAGGCGGCTGCATCCTGATGATCGGTT
TGTTGCTGCGACGCCCAAGGTTTTCGATCCTCGTGCTGAGAGATTGCGGGCGTTGGACCTTATTTCTCAGTTCCATGCGTGA
mRNA sequenceShow/hide mRNA sequence
GGGGAATTGGATTCCAAACCAGCCAACCAAACGAAATATGGTTGAATTTTCAAAAAATGAATTTCATAGGATTTGGTTGGGTGGAATCTCTACTGCAAACCAAATTCCAC
AAAAGTTGTACGGAGAGGAGTGATGATTCAAGCATCAGTTGGCTTGAATCTCGATAGTGAGAGAAGCAAGACGGAAGCCATGGAAGAAGAAGCAGCACCTTCACTGCCCG
ACCTAATTCAGTCGCTGGATCAAGCATCGTTCATGGCGAAGCAGCTTCCATCTACATCCAACCCGACCCATCTCCTTCAAATCTACAGTTCCCTCCGCCAAGCCAACCTC
CGCCTCTCCCTCTTCCTCTCCCCAACTCACTTCCCCCAATCTCACCCCACTTCCGCAACCACCGCCGACGGCGACGACCCGATGCAGCTCGCCGACGCCGAAGACACTTC
CCATGGCGCGATTCAATTGGTGGAGGAGAAGATGAAGGATTGCTTTATCAAGAACAAGCGGCTCAAGCGTCAACTCTCGCCATCCGCCGCGGCCGTGGCGGAGGAAAGGC
GGCTGCATCCTGATGATCGGTTTGTTGCTGCGACGCCCAAGGTTTTCGATCCTCGTGCTGAGAGATTGCGGGCGTTGGACCTTATTTCTCAGTTCCATGCGTGAGGCTAA
ATTGAAACATCGAGCACTGTGGTTATCCGTGGCAGATTAACACTTTAGATGAGCTTTTGATTATGATGTCTACTTTGGTTGGCTTGTTTTGTTGCATTCTCTGCCGAAAG
GCCAAGGAGAGCTTGTCATATTCTCTGCAATTGCAACTTTGGTCTGACTGTCTGGAGCCATTTTTTAGGTGTTTGGCTTTCAGTTTGCTAGAGACATGGCGGTTTTAGGG
GATGAATGGGGAGTTTCATCTCCATCCTCCTTTCCTTGAGAAGGTGAAAGTGTGCTCTGTAATGTGGGGTGAAATGAATAATAGGATCTTTATAGAGGACCTCAGTGATG
TTTGGTCTTTGGTTAGGTTCTATGTTTCTCTCTAGGCGCTGACCAAAAAGCTGTGTTGTAATTATTCCTTTGATCATTTTATTTGATTGGAGCCTCTTTCTTGAGTTGAG
CTTCCTTTTATGGGCTTGGTTTTTTCCATGTCCCAGTATTCTTTCATTTTTTTTTATTTGTTGAAATTTTGGTTGTTTATCTAAAAATTATTTGAACAAAAATCACATAT
GCCCTTCTATGTATGTGACTTGAGTGCTGTTTGTATAAGTTTTTTCTATTGGTCTTGATTTTGTTTAGCAGATTCTATGTTAT
Protein sequenceShow/hide protein sequence
MIQASVGLNLDSERSKTEAMEEEAAPSLPDLIQSLDQASFMAKQLPSTSNPTHLLQIYSSLRQANLRLSLFLSPTHFPQSHPTSATTADGDDPMQLADAEDTSHGAIQLV
EEKMKDCFIKNKRLKRQLSPSAAAVAEERRLHPDDRFVAATPKVFDPRAERLRALDLISQFHA