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Sed0005455 (gene) of Chayote v1 genome

Gene IDSed0005455
OrganismSechium edule (Chayote v1)
Descriptionbet1-like SNARE 1-2
Genome locationLG04:34302681..34305977
RNA-Seq ExpressionSed0005455
SyntenySed0005455
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151397.1 bet1-like SNARE 1-2 [Cucumis sativus]3.2e-5795.35Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALHTLEDRVSILKRLTGDIHEEVESHN LLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLALYFVL+FLLLFYLIRFLR+FMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

XP_008447527.1 PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]1.2e-5693.8Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALHTLEDRVSILKRLTGDIHEEVESHN LLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLALYF+L+FLL FYLIRFLR+FMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

XP_022138310.1 bet1-like SNARE 1-2 [Momordica charantia]1.7e-5592.25Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        M+YRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALH+LEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK KW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLA+YFVL+F LLFYLIRFLR+FMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

XP_022930222.1 bet1-like SNARE 1-2 [Cucurbita moschata]4.1e-5793.8Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLR S+S+VEIKEHDNDRAL TLEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQKSKW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLA+YFVL+FLLLFYLIRFLRFFMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

XP_038906834.1 bet1-like SNARE 1-2 isoform X2 [Benincasa hispida]4.1e-5794.57Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALHTLEDR+SILKRLTGDIHEEVESHN LLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLALYFVL+FLLLFYLIRFLR+FMQ+
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

TrEMBL top hitse value%identityAlignment
A0A0A0L808 t-SNARE coiled-coil homology domain-containing protein1.5e-5795.35Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALHTLEDRVSILKRLTGDIHEEVESHN LLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLALYFVL+FLLLFYLIRFLR+FMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

A0A1S3BHN2 bet1-like SNARE 1-25.8e-5793.8Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALHTLEDRVSILKRLTGDIHEEVESHN LLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLALYF+L+FLL FYLIRFLR+FMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

A0A6J1C943 bet1-like SNARE 1-28.4e-5692.25Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        M+YRREHRSSRSALFDDLEEGGLRT SSSVEIKEHDND+ALH+LEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK KW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLA+YFVL+F LLFYLIRFLR+FMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

A0A6J1EPS6 bet1-like SNARE 1-22.0e-5793.8Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLR S+S+VEIKEHDNDRAL TLEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQKSKW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLA+YFVL+FLLLFYLIRFLRFFMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

A0A6J1KMZ6 bet1-like SNARE 1-22.0e-5793.8Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW
        MSYRREHRSSRSALFDDLEEGGLR S+S+VEIKEHDNDRAL TLEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQKSKW
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKW

Query:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS
        RTCRLA+YFVL+FLLLFYLIRFLRFFMQS
Subjt:  RTCRLALYFVLAFLLLFYLIRFLRFFMQS

SwissProt top hitse value%identityAlignment
O15155 BET1 homolog3.2e-0424.75Show/hide
Query:  GGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFVLAFLLLFYLI
        G    ++S     E +N+R   +L  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM + K++         C + L+ +  F +++++I
Subjt:  GGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFVLAFLLLFYLI

Query:  R
        +
Subjt:  R

O35623 BET1 homolog8.5e-0528.41Show/hide
Query:  EHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFVLAFLLLFYLIR
        E +NDR   +L  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM R K++         C + L+ +  F +++++I+
Subjt:  EHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFVLAFLLLFYLIR

Q62896 BET1 homolog5.0e-0527.19Show/hide
Query:  RSALFDDLEEGGLRT---SSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLAL
        R+ L D    GG      ++S     E +NDR   +L  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM R K++         C + L
Subjt:  RSALFDDLEEGGLRT---SSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLAL

Query:  YFVLAFLLLFYLIR
        + +  F +++++I+
Subjt:  YFVLAFLLLFYLIR

Q94CG2 Bet1-like SNARE 1-24.3e-3360.94Show/hide
Query:  MSYRREHRSSRSALF---DDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQK
        M++RRE+R+SR++LF   D LEEG LR SSS     E DND AL  L+DRVS LKR+TGDIHEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K
Subjt:  MSYRREHRSSRSALF---DDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQK

Query:  SKWRTCRLALYFVLAFLLLFYLIRFLRF
        S  ++C+L  YFVL FL+++YLIR L +
Subjt:  SKWRTCRLALYFVLAFLLLFYLIRFLRF

Q9M2J9 Bet1-like SNARE 1-13.4e-3060.66Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSS-SVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSK
        M+ RRE R  RS+LFD +EEGG+R +SS S EI EH+N+RAL  L+DRV +LKRL+GDI+EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE KS 
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSS-SVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSK

Query:  WRTCRLALYFVLAFLLLFYLIR
         R   L   FV  FL+++YL R
Subjt:  WRTCRLALYFVLAFLLLFYLIR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A2.4e-3160.66Show/hide
Query:  MSYRREHRSSRSALFDDLEEGGLRTSSS-SVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSK
        M+ RRE R  RS+LFD +EEGG+R +SS S EI EH+N+RAL  L+DRV +LKRL+GDI+EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE KS 
Subjt:  MSYRREHRSSRSALFDDLEEGGLRTSSS-SVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSK

Query:  WRTCRLALYFVLAFLLLFYLIR
         R   L   FV  FL+++YL R
Subjt:  WRTCRLALYFVLAFLLLFYLIR

AT4G14455.1 Target SNARE coiled-coil domain protein3.1e-3460.94Show/hide
Query:  MSYRREHRSSRSALF---DDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQK
        M++RRE+R+SR++LF   D LEEG LR SSS     E DND AL  L+DRVS LKR+TGDIHEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K
Subjt:  MSYRREHRSSRSALF---DDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQK

Query:  SKWRTCRLALYFVLAFLLLFYLIRFLRF
        S  ++C+L  YFVL FL+++YLIR L +
Subjt:  SKWRTCRLALYFVLAFLLLFYLIRFLRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACCGAAGGGAGCATCGTTCTTCGAGATCCGCTCTCTTTGATGACCTTGAAGAGGGTGGTCTCAGGACCAGCTCTTCTTCAGTCGAAATTAAAGAGCATGACAA
TGACAGAGCCCTCCATACTTTGGAAGATAGAGTCTCTATTTTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATAGTTTACTTGACCGAATGGGGA
ATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCACTGTATTTTGTA
TTGGCCTTCTTACTTCTTTTCTATCTCATCAGGTTTCTCAGATTCTTCATGCAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
TCGGAAGGGAAGGTAAGAGAAAATGGCGTTCGAAACCAGTGAGGATTTCTTTGCCTTTCTCTCATTTTCCCCGTAAACAAACGGAATAGATGTTTCTCGTAATCTGTTCA
TCTCTCAATTGAATATCTCTGTACAATTTCAAACTGATTGTGGCGGAACTGGATCGCATTTCGAAGATCTGAGTCCGCGATGAGTTACCGAAGGGAGCATCGTTCTTCGA
GATCCGCTCTCTTTGATGACCTTGAAGAGGGTGGTCTCAGGACCAGCTCTTCTTCAGTCGAAATTAAAGAGCATGACAATGACAGAGCCCTCCATACTTTGGAAGATAGA
GTCTCTATTTTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATAGTTTACTTGACCGAATGGGGAATGGCATGGATGCTTCAAGGGGTATAATGTC
AAGAACCATGGATCGATTCAAGATGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCACTGTATTTTGTATTGGCCTTCTTACTTCTTTTCTATCTCATCA
GGTTTCTCAGATTCTTCATGCAAAGTTGAAGTGTTATTTCTGCATTCAAGTCAACTCGAAATTGTCGGTTAGCCATGTCGCATGGTCATTCAACCTCGCACAGCCATTGT
CTTTGCAAAAACATTGGAACACAGACACACTTTCCTGCAATAGCAGTCTCCAAAATACATCGTTAATGGACTGGAACATGTCAATTAAGTGGCCATTTTTTCGTTGTTTT
TTTTATGGGCTAAGCATATTCGTCGGTTTAGAATATATATATTGCATTCAACCAGTAATAGGGTACATGAAAAAAGGTACATTTTATGCTCTTGCTTTTCTATGTAAGAA
GCTTTTATAGCTTTTATTTTCAGCCTACTATAAGGCACTTGAATCAAAATCTACAGCTTTATTCAAATAAAGCTACAAAAATACTATGGGCTTGAAAATAAACTTTCCAC
ATTAAGATATAGTTACTA
Protein sequenceShow/hide protein sequence
MSYRREHRSSRSALFDDLEEGGLRTSSSSVEIKEHDNDRALHTLEDRVSILKRLTGDIHEEVESHNSLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFV
LAFLLLFYLIRFLRFFMQS