| GenBank top hits | e value | %identity | Alignment |
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| KAG7032582.1 RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. argyrosperma] | 0.0e+00 | 74.82 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRR-----NG
T G+TIE++GF R+ +A EVK ++ENHTG+GT+S V ISKPKDKK+R TFA V F SK+AAEYVV+KAEAEERLWF YLKAR V R
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRR-----NG
Query: VERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN
+ER+E V+ G+++ +D+MRVIW+GE+W +E+G RKL F+LS+G D+YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS +
Subjt: VERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN
Query: ----SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGY
SK+STGF WIRDVDFTPSS IGQS ALC E+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q IP+KILFKIN+LVQHGY
Subjt: ----SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGY
Query: LPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRF
LPG ALDD+FF+LVDP RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP+KVYFRGPEANLSNRVVRRF
Subjt: LPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRF
Query: SDDIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF------
DDID+F+RVSFVDEELDKI SSDL+PR S +K ERTRVYDRI SVLRNGI+IG KKFEFLAFSASQLR+NSFWMFASREGL+A+DIR+WMGDF
Subjt: SDDIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF------
Query: -------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLK
QSFGSSRKTLCVE++EIE+IPDVEV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLK
Subjt: -------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLK
Query: YMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRA
YMSLDTQLDVLSWSKY PC+LNR F ++Q++A+ QLDSIL+D SKALEVLELMSPGEMT++LK+MLL YNPHEEPFLNMMLRTFRA
Subjt: YMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRA
Query: DKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNE
DKLLDL+ KSRIFVP+GRTMMGCL ETRTLEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNE
Subjt: DKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNE
Query: CSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTG
CSGSDLDGDLYFV WDPELTCIR +KPMSYEPAPTIQL+HDVTIEEVQEY ANYMVNDGLGGIANAHTVFADK P+KAMS+ECIELAKLFSIAVDFPKTG
Subjt: CSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTG
Query: VPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETE
VPANLP SLRV EYPDFMEKP++ +Y+S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K+ YDFKLGNLM YYGIETE
Subjt: VPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETE
Query: PELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQI
PELV GNILRMGKSFDKRNDMEQIS+AM+SLRKEARGWFNEKGSK Y+++KD+++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVS+KL+QI
Subjt: PELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQI
Query: KREKMCMINSSPVSSLINKFGKLS
KREKM SSPVSSLI+KFGKLS
Subjt: KREKMCMINSSPVSSLINKFGKLS
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| XP_022923210.1 probable RNA-dependent RNA polymerase 1 [Cucurbita moschata] | 0.0e+00 | 74.96 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGV---E
T G+TIE++GF R+ +A EVK ++ENHTG+GT+S V ISKPK +K+R T A V F SK+AAEYVV+KAEAEERLWF YLKAR V R V E
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGV---E
Query: RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN--
R+E V+ G+++W+D+MRVIW+GE+W +E+G RKL F+LS+G D+YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS +
Subjt: RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN--
Query: --SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLP
SK+STGF WIRDVDFTPSS IGQS ALC E+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q IP+KILFKIN+LVQHGYLP
Subjt: --SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLP
Query: GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSD
G ALDD+FF+LVDP RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP+KVYFRGPEANLSNRVVRRF D
Subjt: GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSD
Query: DIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF--------
DID+F+RVSFVDEELDKI SSDL+PR S +K ERTRVYDRI SVLRNGIVIG KKFEFLAFSASQLR+NSFWMFASREGL+A+DIR+WMGDF
Subjt: DIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF--------
Query: -----SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYM
QSFGSSRKTLCVE++EIE+IPDVEV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLKYM
Subjt: -----SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYM
Query: SLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADK
SLDTQLDVLSWSKY PC+LNR F ++Q++A+ QLDSIL+D SKALEVLELMSPGEMT++LK+MLL YNPHEEPFLNMMLRTFRADK
Subjt: SLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADK
Query: LLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECS
LLDL+ KSRIFVP+GRTMMGCL ETRTLEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNECS
Subjt: LLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECS
Query: GSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVP
GSDLDGDLYFV WDPELTCIR +KPMSYEPAPTIQL+HDVTIEEVQEY ANYMVNDGLGGIANAHTVFADK P+KAMS+ECIELAKLFSIAVDFPKTGVP
Subjt: GSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVP
Query: ANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPE
ANLP SLRV EYPDFMEKP++ +Y S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K+ YDFKLGNLM YYGIETEPE
Subjt: ANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPE
Query: LVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKR
LV GNILRMGKSFDKRNDMEQIS+AM+SLRKEARGWFNEKGSK Y+++KD+++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVS+KL+QIKR
Subjt: LVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKR
Query: EKMCMINSSPVSSLINKFGKLS
EKM SSPVSSLI+KFGKLS
Subjt: EKMCMINSSPVSSLINKFGKLS
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| XP_022990904.1 probable RNA-dependent RNA polymerase 1 [Cucurbita maxima] | 0.0e+00 | 75.31 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
TNG+TIE++GFRR+ +A EVK ++ENHTG+GT+S V ISKPKD K R TFA V F SK+AAEYVV+KAEAEE LWF YLKAR V MR VERME
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
Query: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN---SK
V+ G+++ +++MRVIW+GE W +E+G RKL F+LS+G D+YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS + SK
Subjt: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN---SK
Query: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPAL
+STGF WIRDVDFTPSS IGQS +LCLE+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q DIP+KILFKIN+LVQHGYLPG AL
Subjt: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPAL
Query: DDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDS
DD+FF+LVDP+RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP+KVYFRGPEANLSNRVVRRF DDID+
Subjt: DDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDS
Query: FIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF------------
F+RVSFVDEELDKI SSDL+PR S +K ERTRVYDRI SVLRNGIVIG KKFEFLAFSASQLR+NSFWMFASREGL+A+DIR+WMGDF
Subjt: FIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF------------
Query: -SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDT
QSFGSSRKTLCVE++EIE+IPD EV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLKYMSLDT
Subjt: -SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDT
Query: QLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDL
QLDVLSWSKY PC+LNR F ++Q++A+ QLDSIL+D SKALEVLELMSPGEMT++LK+MLL YNPHEEPFLNMMLRTFRADKLLDL
Subjt: QLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDL
Query: KNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDL
+ KSRIFVPKGRTMMGCL ETRTLEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDL
Subjt: KNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDL
Query: DGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLP
DGDLYFV WDPELTCIR +KPMSYEPAPTIQL+HDVT+EEVQEY ANYMVNDGLGGIANAHTVFAD P+KAMS+ECIELAKLFSIAVDFPKTGVPANLP
Subjt: DGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLP
Query: GSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGG
SLRV EYPDFMEKP++ +Y+S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K YDFKLGNLM YYGIETEPELV G
Subjt: GSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGG
Query: NILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKMC
NILRMGKSFDKRNDMEQIS+AM+SLRKEARGWFNEK SK Y+++K ++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVSDKL+QIKREKM
Subjt: NILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKMC
Query: MINSSPVSSLINKFGKLS
SSPVSSLI+KFGKLS
Subjt: MINSSPVSSLINKFGKLS
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| XP_023524039.1 probable RNA-dependent RNA polymerase 1 isoform X1 [Cucurbita pepo subsp. pepo] | 0.0e+00 | 75.49 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
T G+TIE++GF R+ +A EVK ++ENHTG+GT+S V IS+PKD+K R T+A V F SK+AAEYVV+KAEAEERLWF YLKAR V R VERME
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
Query: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSP-NSKKSTG
V+ G++VW+++MRVIW+GENW +E+G RKL F+LS+G +YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS SK+STG
Subjt: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSP-NSKKSTG
Query: FPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPALDDEF
F WIRDVDFTPSS IGQS ALC E+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q DIP+KILFKIN+LVQHGYLPG ALDD+F
Subjt: FPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPALDDEF
Query: FQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRV
F+LVDP+RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP++VYFRGPEANLSNRVVRRF DDID+F+RV
Subjt: FQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRV
Query: SFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-------------SQS
SFVDEELDKI SSDL+PR S +K ERT VYDRI SVLRNGIVIG KKFEFLAFSASQLR+NSFWMFA REGL+A+DIR+WMGDF QS
Subjt: SFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-------------SQS
Query: FGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDTQLDV
FGSSRKTLCVE++EIE+IPDVEV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLKYMSLDTQLDV
Subjt: FGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDTQLDV
Query: LSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKS
LSWSKY PC+LNR F +Q++A+ QLDSIL+D SKALEVLELMSPGEMT+ILK+MLL YNPHEEPFLNMMLRTFRADKLLDL+ KS
Subjt: LSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKS
Query: RIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDL
RIFVPKGRTMMGCL ETR+LEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDL
Subjt: RIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDL
Query: YFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLR
YFV WDPELTCIR +KPMSYEPAPTIQL+HDVTIEEVQEY ANYMVNDGLGGIANAHTVFADK P+KAMS+ECIELAKLFSIAVDFPKTGVPANLP SLR
Subjt: YFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLR
Query: VKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILR
V +YPDFMEKP++ SY+S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K+ YDFKLGNLM YYGIETEPELV GNILR
Subjt: VKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILR
Query: MGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKMCMINS
MGKSFDKRNDMEQIS+AM+SLRKEARGWFNEKGSK Y+++KD+++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVS+KL+QIKREKM S
Subjt: MGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKMCMINS
Query: SPVSSLINKFGKLS
SPVSSLI+KFGKLS
Subjt: SPVSSLINKFGKLS
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| XP_023524048.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita pepo subsp. pepo] | 0.0e+00 | 75.02 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
T G+TIE++GF R+ +A EVK ++ENHTG+GT+S V IS+PKD+K R T+A V F SK+AAEYVV+KAEAEERLWF YLKAR V R VERME
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
Query: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN-------
V+ G++VW+++MRVIW+GENW +E+G RKL F+LS+G +YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS +
Subjt: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN-------
Query: -SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPG
SK+STGF WIRDVDFTPSS IGQS ALC E+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q DIP+KILFKIN+LVQHGYLPG
Subjt: -SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPG
Query: PALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDD
ALDD+FF+LVDP+RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP++VYFRGPEANLSNRVVRRF DD
Subjt: PALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDD
Query: IDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF---------
ID+F+RVSFVDEELDKI SSDL+PR S +K ERT VYDRI SVLRNGIVIG KKFEFLAFSASQLR+NSFWMFA REGL+A+DIR+WMGDF
Subjt: IDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF---------
Query: ----SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMS
QSFGSSRKTLCVE++EIE+IPDVEV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLKYMS
Subjt: ----SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMS
Query: LDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKL
LDTQLDVLSWSKY PC+LNR F +Q++A+ QLDSIL+D SKALEVLELMSPGEMT+ILK+MLL YNPHEEPFLNMMLRTFRADKL
Subjt: LDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKL
Query: LDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSG
LDL+ KSRIFVPKGRTMMGCL ETR+LEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNECSG
Subjt: LDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSG
Query: SDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPA
SDLDGDLYFV WDPELTCIR +KPMSYEPAPTIQL+HDVTIEEVQEY ANYMVNDGLGGIANAHTVFADK P+KAMS+ECIELAKLFSIAVDFPKTGVPA
Subjt: SDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPA
Query: NLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPEL
NLP SLRV +YPDFMEKP++ SY+S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K+ YDFKLGNLM YYGIETEPEL
Subjt: NLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPEL
Query: VGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKRE
V GNILRMGKSFDKRNDMEQIS+AM+SLRKEARGWFNEKGSK Y+++KD+++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVS+KL+QIKRE
Subjt: VGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKRE
Query: KMCMINSSPVSSLINKFGKLS
KM SSPVSSLI+KFGKLS
Subjt: KMCMINSSPVSSLINKFGKLS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KRH3 RNA-dependent RNA polymerase | 0.0e+00 | 72.38 | Show/hide |
Query: GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEER-LWFRDSYLKARAV--AAPMRRRNGV---
G+TIE+YGFR TADEVK +LENHTGDGT+STV ISKPKD+K RFT TV F SKLAAEY+V K+ EER LWF SYLKAR + A + GV
Subjt: GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEER-LWFRDSYLKARAV--AAPMRRRNGV---
Query: ERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSP-NSK
ERME+VKG+ G+++ KMRVIW+GE W +EFG RKL F+LS+ DEYKMEL FENIL +F CPL+ SK FLI+LQGAP+IF+KTP SSSSP S
Subjt: ERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSP-NSK
Query: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPAL
KST F WIRDVDFTPSS IGQS +CL+L P HLP FFQTLVG+K A L GSS S S+LVPI+ Q DI +KILFKIN+L+QHGYL GP L
Subjt: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPAL
Query: DDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDS
DDEFF+LVD +RF SDYI++ALEKLFNLKECCY+P KWLK++YLS Y+S QLPWK ++S+DDGLVY+HRVQITP KVYF GPEANLSNRVVRRF DID+
Subjt: DDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDS
Query: FIRVSFVDEELDKIRSSDLAPRSA--DKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-----------
F+RVSFVDEELDK+ S DLAPRS+ + S+RTRVYDR+ SVL+NGIVIG KKFEFLAFSASQLR+NSFWMFASREGLSA+DIR+WMGDF
Subjt: FIRVSFVDEELDKIRSSDLAPRSA--DKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-----------
Query: --SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLD
QSFGSSRKTLCVE+ EIE+IPDVEV RK I YCFSDGIGKIS+ A+KVAE+CGL+ HTPSAFQIRYAG+KGVVAIDPTS KKLSLR+SMLKYMSLD
Subjt: --SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLD
Query: TQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLD
TQLDVLSWSKY PC+LNR F +KQ+EAI QLDSIL+D S+ALEVLELMSPGEMT+ILKE+L Y P+EEPFLNMMLRTFRA+KLLD
Subjt: TQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLD
Query: LKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSD
LK KSRIFVP+GRTM+GCL ETRTLEYGQVF CSVP ++S+ +FVVKGK+VVAKNPCLHPGDVRV DAVDVK LHHMVDCVVFPQKGKRPHPNECSGSD
Subjt: LKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSD
Query: LDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANL
LDGDLYF WD ELTCI+ VKPM+YEPAPTIQLNHDVTIEE+QEY ANYMVNDG+G IANAHTVFADK+ +KAMS ECI+LAKLFSIAVDFPKTGVPANL
Subjt: LDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANL
Query: PGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKDC------------------YDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVG
P +LRV EYPDFM+KP++P+YVS GV GKLFRGVKD YDPDMEVDGF+ YL EAFD+KT+YDFKLGNLM YYGI+TEPELV
Subjt: PGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKDC------------------YDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVG
Query: GNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKM
GN+L+M KSFDKRND+EQI+ AMKSLRKE R WFNE SK YDD +D+ +AKASAWYYVTYHP+YWG YNEGMQRDHFLSFPWCV+DKL+QIKR+KM
Subjt: GNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKM
Query: CMINSSPVSSLINKF
+ NS PVSSL + F
Subjt: CMINSSPVSSLINKF
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| A0A6J1EB47 RNA-dependent RNA polymerase | 0.0e+00 | 74.96 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGV---E
T G+TIE++GF R+ +A EVK ++ENHTG+GT+S V ISKPK +K+R T A V F SK+AAEYVV+KAEAEERLWF YLKAR V R V E
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGV---E
Query: RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN--
R+E V+ G+++W+D+MRVIW+GE+W +E+G RKL F+LS+G D+YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS +
Subjt: RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN--
Query: --SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLP
SK+STGF WIRDVDFTPSS IGQS ALC E+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q IP+KILFKIN+LVQHGYLP
Subjt: --SKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLP
Query: GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSD
G ALDD+FF+LVDP RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP+KVYFRGPEANLSNRVVRRF D
Subjt: GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSD
Query: DIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF--------
DID+F+RVSFVDEELDKI SSDL+PR S +K ERTRVYDRI SVLRNGIVIG KKFEFLAFSASQLR+NSFWMFASREGL+A+DIR+WMGDF
Subjt: DIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF--------
Query: -----SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYM
QSFGSSRKTLCVE++EIE+IPDVEV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLKYM
Subjt: -----SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYM
Query: SLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADK
SLDTQLDVLSWSKY PC+LNR F ++Q++A+ QLDSIL+D SKALEVLELMSPGEMT++LK+MLL YNPHEEPFLNMMLRTFRADK
Subjt: SLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADK
Query: LLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECS
LLDL+ KSRIFVP+GRTMMGCL ETRTLEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNECS
Subjt: LLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECS
Query: GSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVP
GSDLDGDLYFV WDPELTCIR +KPMSYEPAPTIQL+HDVTIEEVQEY ANYMVNDGLGGIANAHTVFADK P+KAMS+ECIELAKLFSIAVDFPKTGVP
Subjt: GSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVP
Query: ANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPE
ANLP SLRV EYPDFMEKP++ +Y S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K+ YDFKLGNLM YYGIETEPE
Subjt: ANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPE
Query: LVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKR
LV GNILRMGKSFDKRNDMEQIS+AM+SLRKEARGWFNEKGSK Y+++KD+++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVS+KL+QIKR
Subjt: LVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKR
Query: EKMCMINSSPVSSLINKFGKLS
EKM SSPVSSLI+KFGKLS
Subjt: EKMCMINSSPVSSLINKFGKLS
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| A0A6J1FF44 RNA-dependent RNA polymerase | 0.0e+00 | 73.74 | Show/hide |
Query: MTTTN--GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPM----R
M TTN G+TIE+YGF TADEVK ++ENHTGDGT+ TV ISK D+K RFTFATV+FTSKL EYVV +A AE+RLWF SYLKAR V + R
Subjt: MTTTN--GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPM----R
Query: RRNGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSS
+ERMENV +G+LV +++M+VIWKG W +E+G RKL F+LS+ EYKMEL FENILG Q C +DR SKLFLI+LQGAP+IFKK PLSSSS
Subjt: RRNGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSS
Query: P-NSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYL
+S++STGF WIRDVDFTPSS IGQS ALCLEL GD LPSFFQTLVG+K+ A LQ GSS SS S+LVPI+ Q DIP+KILFKIN+L+QHGYL
Subjt: P-NSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYL
Query: PGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFS
PGPALD+EFF+LVD +RFR DY+EYAL+KLF+ KECCYEP KWLK++YLS YSSKQLPWKP++S+DDGLVY+HRVQITP+KVYFRGPEANLSNRVVR F
Subjt: PGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFS
Query: DDIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGD--------
DD+D+F+RVSFVDEELDK+ S DL+PR SA+ RTRVYDR+ SVLRNGIVIG+KKFEFLAFSASQLR+NS WMFASR+GLSA+DIR+WMGD
Subjt: DDIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGD--------
Query: -----FSQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKY
QSFGSSR+TLCVE+ EIE+I DVEV +I YCFSDGIGKIS AEKVAE+CGL+ HTPSAFQIRYAG+KGVVAIDPTSTKKLSLR SMLKY
Subjt: -----FSQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKY
Query: MSLDTQLDVLSWSKYHPCYLNRS-------------CFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRAD
SLDTQ+DVLSWSKY PC+LNR F +KQ+EAI QLDSIL+D S+ALEVLELMSPGEMT+ILKE+LLLY P+EEPFLNMMLRTFRA
Subjt: MSLDTQLDVLSWSKYHPCYLNRS-------------CFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRAD
Query: KLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNEC
KLLDL+ KSRIFVPKGRTMMGCL ETRTLEYGQVF CS+PG++S+S+FVVKGKVVVAKNPCLHPGDVR+ DAVDVK LHHMVDCVVFPQKGKRPHPNEC
Subjt: KLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNEC
Query: SGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGV
SGSDLDGDLYFV WDPELT I+ VKPMSYEPAPT+QL+HDVTIEEVQ YL YMVNDGLGGIANAHTVFADK P+KAM++ECI+LAKLFSIAVDFPKTGV
Subjt: SGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGV
Query: PANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEP
PAN P +LRV+EYPDFMEKP +P+YVS GV GKLFRGVKD CYDPDMEVDGF++YL EAF+FK RYDFKLGNLM YYGI+TEP
Subjt: PANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEP
Query: ELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIK
EL+ GNILRM KSFDKRNDMEQIS+AMKSLRKEAR WFNEKGSK AYD+D + NE +AKASAWY VTYHP+YWG YNEGMQRDHFLSFPWCVSDKL+QIK
Subjt: ELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIK
Query: REKMCMINSSPV
REK C++N SPV
Subjt: REKMCMINSSPV
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| A0A6J1JTB1 RNA-dependent RNA polymerase | 0.0e+00 | 75.31 | Show/hide |
Query: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
TNG+TIE++GFRR+ +A EVK ++ENHTG+GT+S V ISKPKD K R TFA V F SK+AAEYVV+KAEAEE LWF YLKAR V MR VERME
Subjt: TNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPMRRRNGVERME
Query: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN---SK
V+ G+++ +++MRVIW+GE W +E+G RKL F+LS+G D+YKMEL FENILG Q CP + SS LFLI+LQGAP+IFKK P SSSS + SK
Subjt: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGF--DEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPN---SK
Query: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPAL
+STGF WIRDVDFTPSS IGQS +LCLE+ PGD LPSFFQTLVG+K+I +L GS+ SS S+LVPIV Q DIP+KILFKIN+LVQHGYLPG AL
Subjt: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPAL
Query: DDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDS
DD+FF+LVDP+RFRSDYIEYALEKLF+LKECCYEP KWLK++YLS SS QLPWK ++S+DD LVY+HRVQITP+KVYFRGPEANLSNRVVRRF DDID+
Subjt: DDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDS
Query: FIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF------------
F+RVSFVDEELDKI SSDL+PR S +K ERTRVYDRI SVLRNGIVIG KKFEFLAFSASQLR+NSFWMFASREGL+A+DIR+WMGDF
Subjt: FIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF------------
Query: -SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDT
QSFGSSRKTLCVE++EIE+IPD EV RK IKYCFSDGIGKISEA AE VAE+CGL+ HTPSAFQIRYAG+KGVVA+DPTS KKLSLR SMLKYMSLDT
Subjt: -SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDT
Query: QLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDL
QLDVLSWSKY PC+LNR F ++Q++A+ QLDSIL+D SKALEVLELMSPGEMT++LK+MLL YNPHEEPFLNMMLRTFRADKLLDL
Subjt: QLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDL
Query: KNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDL
+ KSRIFVPKGRTMMGCL ETRTLEYGQVF CSVPG++S+S+FVVKGKVVVAKNPCLHPGDVRV DAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDL
Subjt: KNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDL
Query: DGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLP
DGDLYFV WDPELTCIR +KPMSYEPAPTIQL+HDVT+EEVQEY ANYMVNDGLGGIANAHTVFAD P+KAMS+ECIELAKLFSIAVDFPKTGVPANLP
Subjt: DGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLP
Query: GSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGG
SLRV EYPDFMEKP++ +Y+S GV GKLFRGVKD CYDPDMEV GF+NYL EAFD+K YDFKLGNLM YYGIETEPELV G
Subjt: GSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGG
Query: NILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKMC
NILRMGKSFDKRNDMEQIS+AM+SLRKEARGWFNEK SK Y+++K ++ +AKASAWY+VTYHPN+WG YNEGMQRDHFLSFPWCVSDKL+QIKREKM
Subjt: NILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREKMC
Query: MINSSPVSSLINKFGKLS
SSPVSSLI+KFGKLS
Subjt: MINSSPVSSLINKFGKLS
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| A0A6J1K1Q3 RNA-dependent RNA polymerase | 0.0e+00 | 73.32 | Show/hide |
Query: MTTTN--GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAV---------
M TTN G+ IE+YGF + TADEVK ++ENHTGDGT+ TV ISKP D+K RFTFATVRFTSKL EYVV +A AE+RLWF SYLKAR V
Subjt: MTTTN--GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAV---------
Query: AAPMRRRNGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTP
AA R G+ERMENV +G+LV ++KM+VIWK W +E+G RKL F+LS+ EYKMEL FENILG Q C DR S+LFLI+LQGAP+IFKKTP
Subjt: AAPMRRRNGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTP
Query: LSSSSP-NSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLV
SSSS +S++STGF WIRDVDFTPSS IGQS ALCLEL PGD LPSFF+TLVG+K+ A L PGSS SS S+LVPI+ Q DI +KILFKIN+L+
Subjt: LSSSSP-NSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLV
Query: QHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRV
QHGYLPGPALD+EFF+LVD +RFR +YIEYALEKLF+ KECCYEP KWLK++YLS YSSKQLP KP+VS+DDGLVY+HRVQITP+KVYFRGPEANLSNRV
Subjt: QHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRV
Query: VRRFSDDIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF--
VR F DD+D+F+RVSFVDEELDK+ S DL+PR SA+ RTRVYDR+ SVLRNGIVIG+KKFEFLAFSASQLR+NS WMFASR+GLSA+DIR+WMGDF
Subjt: VRRFSDDIDSFIRVSFVDEELDKIRSSDLAPR-SADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF--
Query: -----------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRD
QSFGSSR+TLCVE+ EIE+IPDVEV +I YCFSDGIGKIS AEKVAE+CGL+ HTPSAFQIRYAG+KGVVAIDPTSTKKLSLR
Subjt: -----------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRD
Query: SMLKYMSLDTQLDVLSWSKYHPCYLNRS-------------CFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLR
SMLKY SLDTQ+DVLSWSKY PC+LNR F +KQ+EAI QLDSIL+D S+ALEVLELMSPGEMT+ILKE+LLLY P+EEPFLNMMLR
Subjt: SMLKYMSLDTQLDVLSWSKYHPCYLNRS-------------CFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLR
Query: TFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRP
TFRA KLLDL+ KSRIFVPKGRTMMGCL ETRTLEYGQVF CS+PG++S+S+FVVKGKVVVAKNPCLHPGDVR+ DAVDVK LHHMV+CVVFPQKG+RP
Subjt: TFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRP
Query: HPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDF
HPNECSGSDLDGDLYFV WDPELT I+ VKPMSYEPAPT++L+HDVTIEEVQEYLA YMVNDGLGGIANAHTVFADK P+KAM++ECI+LAKLFSIAVDF
Subjt: HPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDF
Query: PKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYG
PKTGVPAN P +LRV+EYPDFMEKP +P+YVS GV GKLFRGVKD CYDPDMEVDGF++YL EAF++K RYDFKLGNLM YYG
Subjt: PKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYG
Query: IETEPELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDK
I+TEPEL+ GNILRM KSFDKRND+EQIS+A+KSLRKEAR WFNEKGSK A D+D D +E +AKASAWY VTYHP+YWG YNEGMQRDHFLSFPWCVSDK
Subjt: IETEPELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDK
Query: LLQIKREKMCMINSSPV
L+QIKREK C++N SP+
Subjt: LLQIKREKMCMINSSPV
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| SwissProt top hits | e value | %identity | Alignment |
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| O82504 RNA-dependent RNA polymerase 2 | 5.3e-201 | 37.44 | Show/hide |
Query: TTTNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKAR-----AVAAPMRRR
TTTN T+++ + ADE+ +LE H G+ T+ + I +D FA V+FT+ L + + ++ +L F+ L+ + P+ R
Subjt: TTTNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKAR-----AVAAPMRRR
Query: NGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKL--FLIKLQGAPKIFKKTPL----
++ + G+ + E + + K + TE R++ F + D YK+E+ FE+I+ C +S++ FL+KL+ PK+FK+ +
Subjt: NGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKL--FLIKLQGAPKIFKKTPL----
Query: ---SSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIVQR----LDIPFKILFKINS
S K+ F WIR DF+ S SIG S+ CLE+ G + F L +++ L G + +S + +VP++ L+ P++ILF++N+
Subjt: ---SSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIVQR----LDIPFKILFKINS
Query: LVQHGYLP-GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVS----VDDGLVYIHRVQITPSKVYFRGPE
LV + A D E +++ + + L+KL CY+P ++K + S+ K++ P+ + + ++ R +TPSK+Y GPE
Subjt: LVQHGYLP-GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVS----VDDGLVYIHRVQITPSKVYFRGPE
Query: ANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPRSAD----KSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASD
+N VV+ F++ + F+RV+FV+E+ K+ ++ L+ S + K RT +Y+R+ S+L GI +G K+FEFLAFSASQLR NS WMFAS E + A D
Subjt: ANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPRSAD----KSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASD
Query: IRDWMGDF-------------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDP
IR+WMG F Q F +SR+TL V ++E IPD+EV YCFSDGIGKIS A A++VA++CG L H PSAFQIRY G+KGV+A+D
Subjt: IRDWMGDF-------------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDP
Query: TSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNRSCFCEKQ----EEAIYQ---------LDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNP
+S +KLSLRDSMLK+ S + L+V W++ PC+LNR C E+A+++ L ++L+D AL VL+ +S N+L +MLL Y P
Subjt: TSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNRSCFCEKQ----EEAIYQ---------LDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNP
Query: HEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVP------------GKASKSSFVVKGKVVVAKNPCLHPGDVRVFD
EP+L+MMLR +L +LK++ RI VPKGR ++GC+ E LEYGQV+ + ++ K + + VV GKVVV KNPCLHPGD+RV D
Subjt: HEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVP------------GKASKSSFVVKGKVVVAKNPCLHPGDVRVFD
Query: AVDVKTLHH--MVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFA
A+ +DC++FPQKG+RPHPNECSG DLDGD +FVSWD ++ PM Y + ++HDVT+EE+ ++ +YM++D LG I+ AH V A
Subjt: AVDVKTLHH--MVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFA
Query: DKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD---------------CYDPDMEVDGFQNYL
D+ P+KA S +C+ELA L S AVDF KTG PA +P +L+ +E+PDF+E+ +P+Y+S+ VFGKL+R VK YD +E GF++++
Subjt: DKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD---------------CYDPDMEVDGFQNYL
Query: GEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND------MEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVT
A + Y KL +LM YYG E E++ G IL+ + + R++ ++I++++K L KEA GWF + C +D+ + ASAWYYVT
Subjt: GEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND------MEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVT
Query: YHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKRE
Y+PN+ ++ FLSFPW V D LL IK E
Subjt: YHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKRE
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| Q0DXS3 Probable RNA-dependent RNA polymerase 1 | 5.6e-235 | 57.59 | Show/hide |
Query: SKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPRSAD--KSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASR
S VYF GPE N+SNRVVR FS DI++F+R+SFVDE+ +K+R++DL+PRSA + RT +Y R+ SVL +GI IG K FEFLAFS+SQLRDNS WMFASR
Subjt: SKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPRSAD--KSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASR
Query: EGLSASDIRDWMGDF-------------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFK
+GL+ASDIR WMGDF QSF SS +TL V+K E+E I D ++ ++ FSDGIGKIS A A +VA +C L PSAFQIRY G+K
Subjt: EGLSASDIRDWMGDF-------------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFK
Query: GVVAIDPTSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEM
GVVA+DPTS KLSLR SMLK+ S + +DVL++SKY P +LNR S F +KQEEA+ QL+ ++ D A+E +ELM GE+TN +KE+
Subjt: GVVAIDPTSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEM
Query: LLL-YNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVK
LL Y P +EP+L+M+L+TFRA KLL+LK KSRI +PKGR MMGCL ETRTL+YGQVF + + G F V GKVV+AKNPCLHPGD+R+ AVDV
Subjt: LLL-YNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVK
Query: TLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKA
LHHM +CVVFPQ+G RPHPNECSGSDLDGD+YFVSWDP L R V PM Y PAPT L+HDVTIEEV+EY NY+VN+ LG IANAH VFADK KA
Subjt: TLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKA
Query: MSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD---------------CYDPDMEVDGFQNYLGEAFDFK
SS CIELAKLFSIAVDFPKTGVPA +P L VKEYPDFMEK + +Y SKGV GKL+R +K YD DM VDG+++Y+ EA K
Subjt: MSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD---------------CYDPDMEVDGFQNYLGEAFDFK
Query: TRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGM
YDFKLGNLM +YGI++E E++ G IL+M K+F K++D + I +A++SLRKEAR F+E D+ + AKASAWY+VTYHP +WG YNEG
Subjt: TRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGM
Query: QRDHFLSFPWCVSDKLLQIKREKMCMINSSP
+R HF+SFPWC+ +KLL+IK+ + + P
Subjt: QRDHFLSFPWCVSDKLLQIKREKMCMINSSP
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| Q7XM31 Probable RNA-dependent RNA polymerase 2 | 4.5e-184 | 38.52 | Show/hide |
Query: RKLSFHLSHGFDEYKMELPFENI---LGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPNS----------KKSTGFPWIRDVDFTPSSSIGQSSA
R++ +L H YK+E+ FE++ LG C LD + L++L AP+I T +S + NS K+ F W+R +DFTP+ S G+ S
Subjt: RKLSFHLSHGFDEYKMELPFENI---LGYQFYCPLDRSSKLFLIKLQGAPKIFKKTPLSSSSPNS----------KKSTGFPWIRDVDFTPSSSIGQSSA
Query: LCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEK
L L+L + ++L F L + + S++VP+V + +P+++LF++NSL+ G + ++ + F+ + D EK
Subjt: LCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIV---QRLDIPFKILFKINSLVQHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEK
Query: LFNLKECCYEPHKWLKEKYLSLYSSKQ--LPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPR
+ L+ CY P ++++++ S+ S L + + L+ +RV ITPSK++ GPE ++N VV+ S F+RV+FVDE+ K+ S+ ++ R
Subjt: LFNLKECCYEPHKWLKEKYLSLYSSKQ--LPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPR
Query: SA----DKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-------------SQSFGSSRKTLCVEKSEI
K +T +Y RI S+L+ G IG K FEFLAFSASQLR NS WMFAS L+A IR WMG F Q F SSR+T V + ++
Subjt: SA----DKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-------------SQSFGSSRKTLCVEKSEI
Query: EIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGL-LCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-
E+IPD+E+ KY FSDGIGKIS A++VA GL + PSAFQIRY G+KGV+AIDP S+ LSLR SM K+ S L++ SWSK PCY+NR
Subjt: EIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGL-LCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-
Query: ------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCL
F Q++ + + + +L + AL VL + E +K +L Y P EP+L+M+L+ + ++L D++ + +I VPKGR ++GCL
Subjt: ------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCL
Query: GETRTLEYGQVFAQCSVPGKASKSS------------FVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF
ET LEYGQV+ + + K K S V GKV + KNPCLHPGD+RV +A+ L MVDC+VFPQ+G+RPHPNECSG DLDGDLYF
Subjt: GETRTLEYGQVFAQCSVPGKASKSS------------FVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF
Query: VSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVK
++WD +L + PM Y ++H VT+EE+Q++ +YM+ND LG I+ AH + AD+SP KA S EC++LA L S+AVDF KTG PA +P +LR +
Subjt: VSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVK
Query: EYPDFMEKPHRPSYVSKGVFGKLFRGV--------------------KDCYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILR
EYPDFME+ +P Y+S GV GKL+R YDPD+EV G +L A ++ Y+ KL LM YY E E E++ GNI R
Subjt: EYPDFMEKPHRPSYVSKGVFGKLFRGV--------------------KDCYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILR
Query: MGKSFDKRND------MEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIK
+ KR++ ++I A+ +L +EARGW + + + ASAWY VTYHP + + F SFPW D LL IK
Subjt: MGKSFDKRND------MEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIK
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| Q9LQV2 RNA-dependent RNA polymerase 1 | 0.0e+00 | 52.77 | Show/hide |
Query: GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPM--RRRNGVERME
G+TI+++GF +A+EVK +LE TG GT+ + + +PK R +A V+FTS+ ++ A ERL++ SYLKA V + + R + +
Subjt: GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPM--RRRNGVERME
Query: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTP-----LSSSSPNSK
+K +FG V K +W ++ + FG RKL F S +Y++EL +ENI + P RSSK +I++ GAPKIF+K L
Subjt: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTP-----LSSSSPNSK
Query: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGF-KQICARLELQPGSS-SSSPSDLVPIVQ---RLDIPFKILFKINSLVQHGYLPGP
+ WIR DFT SS IGQS+A CLEL ++P F + + + + ++ GSS SS+ + LVP+V +PF+ILFK+N+LVQ+ L GP
Subjt: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGF-KQICARLELQPGSS-SSSPSDLVPIVQ---RLDIPFKILFKINSLVQHGYLPGP
Query: ALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDI
ALD +F++L++ ++ I++ LEKLF+L ECCYEP WL+++Y S +LP P++S+DDGLVY++RVQ+TP++VYF GPE N+SNRV+R +S I
Subjt: ALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDI
Query: DSFIRVSFVDEELDKIRSSDLAPRSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-----------
++F+RVSFVDE+L+K+RS DL+PRS+ + RT++YDRI+SVLR+GIVIG+KKFEFLAFS+SQLR+NS WMFA + ++A+ IR WMGDF
Subjt: DSFIRVSFVDEELDKIRSSDLAPRSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-----------
Query: --SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLD
QSF SSR+TL V EIE+IPDVE++ +Y FSDGIGKIS A KVA +CGL +PSAFQIRY G+KGVVA+DP S+KKLSLR SM K+ S +
Subjt: --SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLD
Query: TQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLL
T+LDVL+WSKY PCY+NR S F +KQ E + +LD+IL +A E L LM+PGE TNILK ++L Y P EPFL+MML+ FRA KLL
Subjt: TQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLL
Query: DLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGS
+L+ K+RIF+ GR+MMGCL ETRTLEYGQV Q S P + + F++ G VVVAKNPCLHPGDVRV AV+V L+HMVDCVVFPQKG RPHPNECSGS
Subjt: DLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGS
Query: DLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPAN
DLDGD+YFV WD EL RT +PM Y P PT L+HDVTIEEV+EY ANY+VND LG IANAHT FADK P KA S CIELAK FS AVDFPKTGV A
Subjt: DLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPAN
Query: LPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELV
+P L VKEYPDFMEKP +P+Y SK V GKLFR VK+ YD DMEVDGF+ Y+ EAF K YDFKLGNLM YYGI+TE E++
Subjt: LPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELV
Query: GGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREK
G I+RM KSF KR D E I A+++LRKE FN ++++NE AKASAWY+VTYH +YWGLYNEG+ RDHFLSF WCV DKL++IK+
Subjt: GGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREK
Query: M
+
Subjt: M
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| Q9SG02 RNA-dependent RNA polymerase 6 | 5.2e-148 | 35.31 | Show/hide |
Query: RRRNGVE-RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTE----DRKLSFHLSHGFD------------EYKMELPFENILGYQFYCPLDRSSKLFLI
RRR V ++ + G LV D V W+ E G++F + K F S F +YK+EL +I + Y L + ++
Subjt: RRRNGVE-RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTE----DRKLSFHLSHGFD------------EYKMELPFENILGYQFYCPLDRSSKLFLI
Query: KLQGAPKIFKKT---PLSSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQP------GDHLPSFFQTLVGFKQI--CARLELQPGSSSSSPSDLV
+L +P+++ +T + + P PWIR DFT +IG+ + + + P L F V +++ R+ +P
Subjt: KLQGAPKIFKKT---PLSSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQP------GDHLPSFFQTLVGFKQI--CARLELQPGSSSSSPSDLV
Query: PIVQRLDIPFKILFKINSLVQHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRV
I + I F+I+F +NS++ G L + FF L+ D +L+ L K ++ +K LK + + +L S D + I R+
Subjt: PIVQRLDIPFKILFKINSLVQHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRV
Query: QITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDL----AP-----RSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQL
ITP++ Y PE LSNRV+RR+ + F+RV+F+DE + I S+ L AP S+ S++T V+ R+ S+L +G + +K+ FLAFSA+QL
Subjt: QITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDL----AP-----RSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQL
Query: RDNSFWMFASREGLSASDIRDWMGDFSQS------------FGSSRKTLCVEKSEIEI-IPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCH-T
RD S W FA SDI+ WMG F F S+ T+ V E++ +PD+E Y FSDGIG I+ A++V E+ L H +
Subjt: RDNSFWMFASREGLSASDIRDWMGDFSQS------------FGSSRKTLCVEKSEIEI-IPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCH-T
Query: PSAFQIRYAGFKGVVAIDPTSTK--KLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLE
P A+QIRYAGFKGVVA P+ + +L+LRDSM K+ S T L++ SW+++ P +LNR F + QE +Y+L+ IL D+ A EVL
Subjt: PSAFQIRYAGFKGVVAIDPTSTK--KLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLE
Query: LMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPG------------KASKSSF-V
S E N ML + P EP L ML + R +L L+ KSRIFV GR +MGCL E LE+GQ F Q S P K +K+ V
Subjt: LMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPG------------KASKSSF-V
Query: VKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPEL--TCIRTVKPMSYEPAPTIQLNHDVTIEEVQE
VKG V +AKNPCLHPGDVR+ +AVDV LHHM DC++FPQKG RPH NE SGSDLDGDLYFV+WD +L ++ M Y+ A L V +++ +
Subjt: VKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPEL--TCIRTVKPMSYEPAPTIQLNHDVTIEEVQE
Query: YLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKDCYDPD---
+ A + N+ LG I NAH V AD+S AM EC+ LA+L + AVDFPKTG ++P L+ K YPDFM K +Y S + G+L+R VK+ YD D
Subjt: YLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKDCYDPD---
Query: ----------------MEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND--MEQISIAMKSLRKEARGWFNEKGSKC
+E+ GF++ + EA+ K YD +L L+G Y ++ E E+V G+I M K K+ E++ + SL+KE R F E
Subjt: ----------------MEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND--MEQISIAMKSLRKEARGWFNEKGSKC
Query: AYDDDKDDNEGF-AKASAWYYVTYHPNYWGLYNEGMQRDH-----FLSFPWCVSDKLLQIK---REKMCMINSSPVSSL
+++ N + KASAWY+VTYHP + E D LSF W +D L +IK RE + ++ PV SL
Subjt: AYDDDKDDNEGF-AKASAWYYVTYHPNYWGLYNEGMQRDH-----FLSFPWCVSDKLLQIK---REKMCMINSSPVSSL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G14790.1 RNA-dependent RNA polymerase 1 | 0.0e+00 | 52.77 | Show/hide |
Query: GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPM--RRRNGVERME
G+TI+++GF +A+EVK +LE TG GT+ + + +PK R +A V+FTS+ ++ A ERL++ SYLKA V + + R + +
Subjt: GRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKARAVAAPM--RRRNGVERME
Query: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTP-----LSSSSPNSK
+K +FG V K +W ++ + FG RKL F S +Y++EL +ENI + P RSSK +I++ GAPKIF+K L
Subjt: NVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKLFLIKLQGAPKIFKKTP-----LSSSSPNSK
Query: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGF-KQICARLELQPGSS-SSSPSDLVPIVQ---RLDIPFKILFKINSLVQHGYLPGP
+ WIR DFT SS IGQS+A CLEL ++P F + + + + ++ GSS SS+ + LVP+V +PF+ILFK+N+LVQ+ L GP
Subjt: KSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGF-KQICARLELQPGSS-SSSPSDLVPIVQ---RLDIPFKILFKINSLVQHGYLPGP
Query: ALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDI
ALD +F++L++ ++ I++ LEKLF+L ECCYEP WL+++Y S +LP P++S+DDGLVY++RVQ+TP++VYF GPE N+SNRV+R +S I
Subjt: ALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRVQITPSKVYFRGPEANLSNRVVRRFSDDI
Query: DSFIRVSFVDEELDKIRSSDLAPRSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-----------
++F+RVSFVDE+L+K+RS DL+PRS+ + RT++YDRI+SVLR+GIVIG+KKFEFLAFS+SQLR+NS WMFA + ++A+ IR WMGDF
Subjt: DSFIRVSFVDEELDKIRSSDLAPRSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASDIRDWMGDF-----------
Query: --SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLD
QSF SSR+TL V EIE+IPDVE++ +Y FSDGIGKIS A KVA +CGL +PSAFQIRY G+KGVVA+DP S+KKLSLR SM K+ S +
Subjt: --SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDPTSTKKLSLRDSMLKYMSLD
Query: TQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLL
T+LDVL+WSKY PCY+NR S F +KQ E + +LD+IL +A E L LM+PGE TNILK ++L Y P EPFL+MML+ FRA KLL
Subjt: TQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLL
Query: DLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGS
+L+ K+RIF+ GR+MMGCL ETRTLEYGQV Q S P + + F++ G VVVAKNPCLHPGDVRV AV+V L+HMVDCVVFPQKG RPHPNECSGS
Subjt: DLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGS
Query: DLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPAN
DLDGD+YFV WD EL RT +PM Y P PT L+HDVTIEEV+EY ANY+VND LG IANAHT FADK P KA S CIELAK FS AVDFPKTGV A
Subjt: DLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPAN
Query: LPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELV
+P L VKEYPDFMEKP +P+Y SK V GKLFR VK+ YD DMEVDGF+ Y+ EAF K YDFKLGNLM YYGI+TE E++
Subjt: LPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD------------------CYDPDMEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELV
Query: GGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREK
G I+RM KSF KR D E I A+++LRKE FN ++++NE AKASAWY+VTYH +YWGLYNEG+ RDHFLSF WCV DKL++IK+
Subjt: GGNILRMGKSFDKRNDMEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVTYHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKREK
Query: M
+
Subjt: M
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| AT2G19910.1 RNA-dependent RNA polymerase family protein | 4.2e-20 | 28.07 | Show/hide |
Query: EMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDV
+M+L+ P +EP+L L + LK R + + +MG + T L+ ++ C + S + G V+V +NP LH GD+ V A V
Subjt: EMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDV
Query: KTLHHMVD----CVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKP-----MSYEPAPTI--QLNHDVTIEEVQEYL------ANYMVNDGL
K L V V FPQKG R +E +G D DGD+YF+S +P+L + KP S +P+ + +++ EE++E L A + D +
Subjt: KTLHHMVD----CVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKP-----MSYEPAPTI--QLNHDVTIEEVQEYL------ANYMVNDGL
Query: G-------GIANAHTVFADKSPQK--AMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLF
G GI + D+S ++ ++L ++ A+D PK G +LP L +K +P +ME+ + + S + G +F
Subjt: G-------GIANAHTVFADKSPQK--AMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLF
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| AT2G19930.1 RNA-dependent RNA polymerase family protein | 1.5e-20 | 30 | Show/hide |
Query: EMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDV
+M+L+ P +EP L L + DLK ++ V + +MG + T L+ +V C + S + G+V+V +NP LH GD+ + A V
Subjt: EMLLLYNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPGKASKSSFVVKGKVVVAKNPCLHPGDVRVFDAVDV
Query: KTLHHMVD----CVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKP----MSYEP--------APTIQLNHDVTIEEVQEYL--ANYMVNDG
K L V V FPQKG R +E +G D DGD+YF+S +PEL + KP +S P AP+ QL+ + EE+ E A + ++
Subjt: KTLHHMVD----CVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKP----MSYEP--------APTIQLNHDVTIEEVQEYL--ANYMVNDG
Query: LGGIANAHTVFA--------DKSPQKA-MSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVK
+G A++ D++ +KA M + +EL ++ A+D PK G LP L+ +P +ME+ + + S + G +F VK
Subjt: LGGIANAHTVFA--------DKSPQKA-MSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVK
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| AT3G49500.1 RNA-dependent RNA polymerase 6 | 3.7e-149 | 35.31 | Show/hide |
Query: RRRNGVE-RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTE----DRKLSFHLSHGFD------------EYKMELPFENILGYQFYCPLDRSSKLFLI
RRR V ++ + G LV D V W+ E G++F + K F S F +YK+EL +I + Y L + ++
Subjt: RRRNGVE-RMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTE----DRKLSFHLSHGFD------------EYKMELPFENILGYQFYCPLDRSSKLFLI
Query: KLQGAPKIFKKT---PLSSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQP------GDHLPSFFQTLVGFKQI--CARLELQPGSSSSSPSDLV
+L +P+++ +T + + P PWIR DFT +IG+ + + + P L F V +++ R+ +P
Subjt: KLQGAPKIFKKT---PLSSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQP------GDHLPSFFQTLVGFKQI--CARLELQPGSSSSSPSDLV
Query: PIVQRLDIPFKILFKINSLVQHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRV
I + I F+I+F +NS++ G L + FF L+ D +L+ L K ++ +K LK + + +L S D + I R+
Subjt: PIVQRLDIPFKILFKINSLVQHGYLPGPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVSVDDGLVYIHRV
Query: QITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDL----AP-----RSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQL
ITP++ Y PE LSNRV+RR+ + F+RV+F+DE + I S+ L AP S+ S++T V+ R+ S+L +G + +K+ FLAFSA+QL
Subjt: QITPSKVYFRGPEANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDL----AP-----RSADKSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQL
Query: RDNSFWMFASREGLSASDIRDWMGDFSQS------------FGSSRKTLCVEKSEIEI-IPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCH-T
RD S W FA SDI+ WMG F F S+ T+ V E++ +PD+E Y FSDGIG I+ A++V E+ L H +
Subjt: RDNSFWMFASREGLSASDIRDWMGDFSQS------------FGSSRKTLCVEKSEIEI-IPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCH-T
Query: PSAFQIRYAGFKGVVAIDPTSTK--KLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLE
P A+QIRYAGFKGVVA P+ + +L+LRDSM K+ S T L++ SW+++ P +LNR F + QE +Y+L+ IL D+ A EVL
Subjt: PSAFQIRYAGFKGVVAIDPTSTK--KLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNR-------------SCFCEKQEEAIYQLDSILKDSSKALEVLE
Query: LMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPG------------KASKSSF-V
S E N ML + P EP L ML + R +L L+ KSRIFV GR +MGCL E LE+GQ F Q S P K +K+ V
Subjt: LMSPGEMTNILKEMLLL-YNPHEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVPG------------KASKSSF-V
Query: VKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPEL--TCIRTVKPMSYEPAPTIQLNHDVTIEEVQE
VKG V +AKNPCLHPGDVR+ +AVDV LHHM DC++FPQKG RPH NE SGSDLDGDLYFV+WD +L ++ M Y+ A L V +++ +
Subjt: VKGKVVVAKNPCLHPGDVRVFDAVDVKTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPEL--TCIRTVKPMSYEPAPTIQLNHDVTIEEVQE
Query: YLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKDCYDPD---
+ A + N+ LG I NAH V AD+S AM EC+ LA+L + AVDFPKTG ++P L+ K YPDFM K +Y S + G+L+R VK+ YD D
Subjt: YLANYMVNDGLGGIANAHTVFADKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKDCYDPD---
Query: ----------------MEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND--MEQISIAMKSLRKEARGWFNEKGSKC
+E+ GF++ + EA+ K YD +L L+G Y ++ E E+V G+I M K K+ E++ + SL+KE R F E
Subjt: ----------------MEVDGFQNYLGEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND--MEQISIAMKSLRKEARGWFNEKGSKC
Query: AYDDDKDDNEGF-AKASAWYYVTYHPNYWGLYNEGMQRDH-----FLSFPWCVSDKLLQIK---REKMCMINSSPVSSL
+++ N + KASAWY+VTYHP + E D LSF W +D L +IK RE + ++ PV SL
Subjt: AYDDDKDDNEGF-AKASAWYYVTYHPNYWGLYNEGMQRDH-----FLSFPWCVSDKLLQIK---REKMCMINSSPVSSL
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| AT4G11130.1 RNA-dependent RNA polymerase 2 | 3.7e-202 | 37.44 | Show/hide |
Query: TTTNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKAR-----AVAAPMRRR
TTTN T+++ + ADE+ +LE H G+ T+ + I +D FA V+FT+ L + + ++ +L F+ L+ + P+ R
Subjt: TTTNGRTIELYGFRRDTTADEVKNYLENHTGDGTISTVNISKPKDKKTRFTFATVRFTSKLAAEYVVKKAEAEERLWFRDSYLKAR-----AVAAPMRRR
Query: NGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKL--FLIKLQGAPKIFKKTPL----
++ + G+ + E + + K + TE R++ F + D YK+E+ FE+I+ C +S++ FL+KL+ PK+FK+ +
Subjt: NGVERMENVKGYFGNLVWEDKMRVIWKGENWGMEFGTEDRKLSFHLSHGFDEYKMELPFENILGYQFYCPLDRSSKL--FLIKLQGAPKIFKKTPL----
Query: ---SSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIVQR----LDIPFKILFKINS
S K+ F WIR DF+ S SIG S+ CLE+ G + F L +++ L G + +S + +VP++ L+ P++ILF++N+
Subjt: ---SSSSPNSKKSTGFPWIRDVDFTPSSSIGQSSALCLELQPGDHLPSFFQTLVGFKQICARLELQPGSSSSSPSDLVPIVQR----LDIPFKILFKINS
Query: LVQHGYLP-GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVS----VDDGLVYIHRVQITPSKVYFRGPE
LV + A D E +++ + + L+KL CY+P ++K + S+ K++ P+ + + ++ R +TPSK+Y GPE
Subjt: LVQHGYLP-GPALDDEFFQLVDPNRFRSDYIEYALEKLFNLKECCYEPHKWLKEKYLSLYSSKQLPWKPSVS----VDDGLVYIHRVQITPSKVYFRGPE
Query: ANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPRSAD----KSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASD
+N VV+ F++ + F+RV+FV+E+ K+ ++ L+ S + K RT +Y+R+ S+L GI +G K+FEFLAFSASQLR NS WMFAS E + A D
Subjt: ANLSNRVVRRFSDDIDSFIRVSFVDEELDKIRSSDLAPRSAD----KSERTRVYDRIFSVLRNGIVIGEKKFEFLAFSASQLRDNSFWMFASREGLSASD
Query: IRDWMGDF-------------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDP
IR+WMG F Q F +SR+TL V ++E IPD+EV YCFSDGIGKIS A A++VA++CG L H PSAFQIRY G+KGV+A+D
Subjt: IRDWMGDF-------------SQSFGSSRKTLCVEKSEIEIIPDVEVVRKEIKYCFSDGIGKISEAAAEKVAEECGLLCHTPSAFQIRYAGFKGVVAIDP
Query: TSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNRSCFCEKQ----EEAIYQ---------LDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNP
+S +KLSLRDSMLK+ S + L+V W++ PC+LNR C E+A+++ L ++L+D AL VL+ +S N+L +MLL Y P
Subjt: TSTKKLSLRDSMLKYMSLDTQLDVLSWSKYHPCYLNRSCFCEKQ----EEAIYQ---------LDSILKDSSKALEVLELMSPGEMTNILKEMLLL-YNP
Query: HEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVP------------GKASKSSFVVKGKVVVAKNPCLHPGDVRVFD
EP+L+MMLR +L +LK++ RI VPKGR ++GC+ E LEYGQV+ + ++ K + + VV GKVVV KNPCLHPGD+RV D
Subjt: HEEPFLNMMLRTFRADKLLDLKNKSRIFVPKGRTMMGCLGETRTLEYGQVFAQCSVP------------GKASKSSFVVKGKVVVAKNPCLHPGDVRVFD
Query: AVDVKTLHH--MVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFA
A+ +DC++FPQKG+RPHPNECSG DLDGD +FVSWD ++ PM Y + ++HDVT+EE+ ++ +YM++D LG I+ AH V A
Subjt: AVDVKTLHH--MVDCVVFPQKGKRPHPNECSGSDLDGDLYFVSWDPELTCIRTVKPMSYEPAPTIQLNHDVTIEEVQEYLANYMVNDGLGGIANAHTVFA
Query: DKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD---------------CYDPDMEVDGFQNYL
D+ P+KA S +C+ELA L S AVDF KTG PA +P +L+ +E+PDF+E+ +P+Y+S+ VFGKL+R VK YD +E GF++++
Subjt: DKSPQKAMSSECIELAKLFSIAVDFPKTGVPANLPGSLRVKEYPDFMEKPHRPSYVSKGVFGKLFRGVKD---------------CYDPDMEVDGFQNYL
Query: GEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND------MEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVT
A + Y KL +LM YYG E E++ G IL+ + + R++ ++I++++K L KEA GWF + C +D+ + ASAWYYVT
Subjt: GEAFDFKTRYDFKLGNLMGYYGIETEPELVGGNILRMGKSFDKRND------MEQISIAMKSLRKEARGWFNEKGSKCAYDDDKDDNEGFAKASAWYYVT
Query: YHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKRE
Y+PN+ ++ FLSFPW V D LL IK E
Subjt: YHPNYWGLYNEGMQRDHFLSFPWCVSDKLLQIKRE
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