CuGenDBv2

Gene ID	Sed0005472
Organism	Sechium edule (Chayote v1)
Description	exportin-4 isoform X1
Genome location	LG08:26073600..26090724
RNA-Seq Expression	Sed0005472
Synteny	Sed0005472
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0051168 - nuclear export (biological process) GO:0005634 - nucleus (cellular component) GO:0005049 - nuclear export signal receptor activity (molecular function)
InterPro domains	IPR036691 - Endonuclease/exonuclease/phosphatase superfamily IPR044189 - Exportin 4/7-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022966402.1 exportin-4 isoform X1 [Cucurbita maxima]

9.5e-81

81.44

Show/hide

Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

XP_022966409.1 exportin-4 isoform X2 [Cucurbita maxima]

9.5e-81

81.44

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Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

XP_022966418.1 exportin-4 isoform X3 [Cucurbita maxima]

9.5e-81

81.44

Show/hide

Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

XP_022966426.1 exportin-4 isoform X4 [Cucurbita maxima]

9.5e-81

81.44

Show/hide

Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

XP_023530569.1 exportin-4 isoform X1 [Cucurbita pepo subsp. pepo]

2.1e-80

80.41

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Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCR+SLE NYLKTFYCWAIDAAVSVT++I+D QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EZ00 exportin-4 isoform X4

1.7e-80

80.41

Show/hide

Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCR+SLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH D+TKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

A0A6J1HMV7 exportin-4 isoform X1

4.6e-81

81.44

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Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

A0A6J1HPA9 exportin-4 isoform X4

4.6e-81

81.44

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Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

A0A6J1HS30 exportin-4 isoform X3

4.6e-81

81.44

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Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

A0A6J1HTQ6 exportin-4 isoform X2

4.6e-81

81.44

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Query:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM
        +FL A  ++ LIS       +     ERYVQAKVSAVAAQLMKRGWLDFE+SEKE+FF Q+NQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLP 
Subjt:  NFLVARKRKLLIS-------ELQDDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPM

Query:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        EFHEQCRKSLE NYLKTFYCWAIDAAVSVT++IVD QTEVPEV+VC AALRLMFQILNWDFRNAVGAKA++S YFAGVKDH DATKR EYNLVQ
Subjt:  EFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

SwissProt top hits

e value

%identity

Alignment

Q499Y0 Exportin-4

4.4e-04

27.21

Show/hide

Query:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDA
        ++YV+ ++    A ++KRG LD +S + ++ F++++Q I   +   +Q    + L +L+ EFS S+ +S +GL MEFH  C++  +   L+  +   I+ 
Subjt:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDA

Query:  AVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF
         +   S   +   ++    V    L L  Q+L+W+F
Subjt:  AVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF

Q5ZMR9 Exportin-4

6.7e-05

30.3

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Query:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAID
        ++YV+ ++    A ++KRG LD +S + ++ F++++Q I   +   VQ    + L +L+SEFS S+ +S +GL MEFH  C++  + + L+  +   ++
Subjt:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAID

Q9C0E2 Exportin-4

6.7e-05

27.94

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Query:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDA
        ++YV+ ++    A ++KRG LD +S + ++ F++++Q I   +   VQ    + L +L+SEFS S+ +S +GL MEFH  C++  +   L+  +   ++ 
Subjt:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDA

Query:  AVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF
         +   S   +   ++    V    L L  Q+L+W+F
Subjt:  AVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF

Q9ESJ0 Exportin-4

1.5e-04

27.94

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Query:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDA
        ++YV+ ++    A ++KRG LD +S + ++ F++++Q I   +   VQ    + L +L+SEFS S+ +S +GL MEFH  C++  +   L+  +   +  
Subjt:  ERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPST-SSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDA

Query:  AVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF
         +   S   +   ++    V    L L  Q+L+W+F
Subjt:  AVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF

Arabidopsis top hits

e value

%identity

Alignment

AT3G04490.1 unknown protein

6.2e-54

61.63

Show/hide

Query:  DDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPMEFHEQCRKSLELNYLKTFYCWAI
        +  E YV +KVS+VAAQLMKRGWL+F  ++KE FF QINQ+I G HG+DVQF GVNFLESLVSEFSPSTSSAMGLP EFHE CRKSLE N+LK+FY WA 
Subjt:  DDKERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPMEFHEQCRKSLELNYLKTFYCWAI

Query:  DAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF-RNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ
        DAA+SVTS I++  + VPEV+VC A LRLM QILNW+F  +  G +AS++ +  G++  +  +++ E  +VQ
Subjt:  DAAVSVTSIIVDCQTEVPEVRVCMAALRLMFQILNWDF-RNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGCAATTCAACAATCTTATACAGGAATTAGAACTACATGATCTCCCACTTTCCAATGGTAGCTTTTCATGGTCCAAACCTGGGGATGACTTCACTAGATCACTGAT
TGACCGATTCCTTACATCAATAAGCTGGGACACTTTATTCCCTAATTCAAGGGTTTCAAGGCAAATTTGTACGGTGTCAGACCACTATCCTCTTCTCCTTGAAGCTGGTT
CTTTTCAATGGGGTCCTTCCCCTTTTAATTCTACAACAGCTGGCTTGGGATTTCAGAATTTCCTAGTTGCAAGGAAGAGAAAACTGTTAATTTCTGAGCTCCAAGATGAT
AAAGAGCGCTATGTTCAAGCAAAGGTTTCAGCTGTGGCTGCTCAATTGATGAAAAGAGGCTGGCTCGATTTTGAATCCTCTGAGAAAGAGACTTTTTTCAATCAGATAAA
TCAGTCTATTCACGGTGTTCATGGTATTGATGTTCAATTTTGTGGAGTTAACTTCCTGGAGTCATTGGTATCAGAATTTTCACCCTCTACATCAAGTGCTATGGGTCTTC
CAATGGAGTTTCATGAGCAGTGCAGGAAGTCATTGGAGTTGAACTACCTGAAGACGTTCTACTGTTGGGCAATAGATGCTGCCGTAAGTGTCACTAGCATAATCGTTGAT
TGTCAAACTGAGGTTCCAGAAGTCAGAGTTTGTATGGCTGCTTTACGTCTGATGTTTCAAATCTTGAACTGGGATTTTCGTAATGCTGTTGGTGCCAAGGCCAGTATGAG
CTCTTACTTTGCTGGAGTCAAGGATCATGATGATGCAACCAAGCGATGCGAGTATAACTTGGTGCAGGATTTTGACTCTAACTCCTCTATACAAAAACTACACCCAAACG
AGTTTTTGACATAA

mRNA sequence

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Protein sequence

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MKQFNNLIQELELHDLPLSNGSFSWSKPGDDFTRSLIDRFLTSISWDTLFPNSRVSRQICTVSDHYPLLLEAGSFQWGPSPFNSTTAGLGFQNFLVARKRKLLISELQDD
KERYVQAKVSAVAAQLMKRGWLDFESSEKETFFNQINQSIHGVHGIDVQFCGVNFLESLVSEFSPSTSSAMGLPMEFHEQCRKSLELNYLKTFYCWAIDAAVSVTSIIVD
CQTEVPEVRVCMAALRLMFQILNWDFRNAVGAKASMSSYFAGVKDHDDATKRCEYNLVQDFDSNSSIQKLHPNEFLT

Sed0005472 (gene) of Chayote v1 genome