; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005490 (gene) of Chayote v1 genome

Gene IDSed0005490
OrganismSechium edule (Chayote v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationLG14:22829675..22829857
RNA-Seq ExpressionSed0005490
SyntenySed0005490
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40912.1 conserved hypothetical protein [Ricinus communis]5.0e-0560.47Show/hide
Query:  MNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS
        M  ++ ++  RR+ GRPIPKRGQVK+GI+VG+A++V+SIFSHS
Subjt:  MNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS

KAA0052717.1 hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa]4.6e-1184.78Show/hide
Query:  AKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS
        AKMMNNINGQR GRRI GR IPKRGQVKMGIMVG+A TV+SIFS+S
Subjt:  AKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS

KAG5010543.1 hypothetical protein JHK87_019058 [Glycine soja]1.3e-0564Show/hide
Query:  AAAKMMNNINGQRS-GRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQ
        A A+    ING RS  RR  GRPIPKRGQVK+GI+VG+AN+V+SIFS S+
Subjt:  AAAKMMNNINGQRS-GRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQ

KAG7026593.1 Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-1078.26Show/hide
Query:  MNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQKH
        MNNING+R  RRI GRPIPKRGQVKMGIMVGI +TV+SIFSH   H
Subjt:  MNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQKH

RYR65746.1 hypothetical protein Ahy_A03g011675 [Arachis hypogaea]3.8e-0563.83Show/hide
Query:  AAKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS
        A  MM  I   R  RR+ GRPIPKRGQVKMGI+VG+AN+V+SIFS +
Subjt:  AAKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS

TrEMBL top hitse value%identityAlignment
A0A0B2PI97 Uncharacterized protein6.3e-0664Show/hide
Query:  AAAKMMNNINGQRS-GRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQ
        A A+    ING RS  RR  GRPIPKRGQVK+GI+VG+AN+V+SIFS S+
Subjt:  AAAKMMNNINGQRS-GRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQ

A0A445DRE8 Uncharacterized protein1.8e-0563.83Show/hide
Query:  AAKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS
        A  MM  I   R  RR+ GRPIPKRGQVKMGI+VG+AN+V+SIFS +
Subjt:  AAKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS

A0A5A7UDZ4 Uncharacterized protein2.2e-1184.78Show/hide
Query:  AKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS
        AKMMNNINGQR GRRI GR IPKRGQVKMGIMVG+A TV+SIFS+S
Subjt:  AKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS

B9S603 Uncharacterized protein2.4e-0560.47Show/hide
Query:  MNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS
        M  ++ ++  RR+ GRPIPKRGQVK+GI+VG+A++V+SIFSHS
Subjt:  MNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHS

K7L2M4 Uncharacterized protein6.3e-0664Show/hide
Query:  AAAKMMNNINGQRS-GRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQ
        A A+    ING RS  RR  GRPIPKRGQVK+GI+VG+AN+V+SIFS S+
Subjt:  AAAKMMNNINGQRS-GRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCAGCAGCAGCAGCAGCAGCAGCAAAGATGATGAACAACATCAACGGTCAGAGATCAGGCAGGAGGATTCCTGGCCGTCCGATCCCAAAGAGAGGCCAAGTGAA
GATGGGAATCATGGTGGGGATTGCCAACACAGTTTCCTCAATCTTCTCTCACAGCCAGAAACATATATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCAGCAGCAGCAGCAGCAGCAGCAAAGATGATGAACAACATCAACGGTCAGAGATCAGGCAGGAGGATTCCTGGCCGTCCGATCCCAAAGAGAGGCCAAGTGAA
GATGGGAATCATGGTGGGGATTGCCAACACAGTTTCCTCAATCTTCTCTCACAGCCAGAAACATATATCTTAA
Protein sequenceShow/hide protein sequence
MGAAAAAAAAKMMNNINGQRSGRRIPGRPIPKRGQVKMGIMVGIANTVSSIFSHSQKHIS