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Sed0005500 (gene) of Chayote v1 genome

Gene IDSed0005500
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:2829343..2829918
RNA-Seq ExpressionSed0005500
SyntenySed0005500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588556.1 hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3578.26Show/hide
Query:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDHDEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        GG+  KKS+SSFSFFG FKSKR + G++Y+HDE++CPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETE QT TV PS  RT++
Subjt:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDHDEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

KAG6590516.1 hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2462.5Show/hide
Query:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        GG+  KK++SSFSF   FKSKR++ GD YDH    D+++ P KVWPSDADK H WVAEPGIDRKA DYI RIH +RVLET++QT TV PS  + +M
Subjt:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]1.8e-2561.86Show/hide
Query:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        GG+ QKKS+SSFS F  FKSKR + GD+YDH     DE+    KVWPSD DK H W+AEPGIDRKAKDYIDRI+RNRV E+E QT T+ P+  ++N+
Subjt:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]3.7e-2358.16Show/hide
Query:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        M G   QKK++SSFS F  FKSKR + GD Y+H    +++    KVWPSD DK +RWVAEPGIDRKAKDYIDRI++NRV ETE QT T+ P+   +N+
Subjt:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

KGN65989.1 hypothetical protein Csa_006868 [Cucumis sativus]7.2e-2771.58Show/hide
Query:  GGDWQKKS-NSSFSFFGLFKSKRT-KIGD-YYDH-------DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEP
        GG+ QKKS NSSFSF GLFKSKR+ + GD YYDH       ++ +CP KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRV ET  QT T+ P
Subjt:  GGDWQKKS-NSSFSFFGLFKSKRT-KIGD-YYDH-------DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEP

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein8.6e-2661.86Show/hide
Query:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        GG+ QKKS+SSFS F  FKSKR + GD+YDH     DE+    KVWPSD DK H W+AEPGIDRKAKDYIDRI+RNRV E+E QT T+ P+  ++N+
Subjt:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

A0A0A0K8W0 Uncharacterized protein1.8e-2358.16Show/hide
Query:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        M G   QKK++SSFS F  FKSKR + GD Y+H    +++    KVWPSD DK +RWVAEPGIDRKAKDYIDRI++NRV ETE QT T+ P+   +N+
Subjt:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

A0A0A0KBW1 Uncharacterized protein1.5e-2561.86Show/hide
Query:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        GG+ QKKS+SSFS F  FKS+R + GD+YDH     DE+    KVWPSD DK H WVAEPGIDRKAKDYIDRI+RNRV E+E QT T+ P+  ++N+
Subjt:  GGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

A0A0A0LY99 Uncharacterized protein3.5e-2771.58Show/hide
Query:  GGDWQKKS-NSSFSFFGLFKSKRT-KIGD-YYDH-------DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEP
        GG+ QKKS NSSFSF GLFKSKR+ + GD YYDH       ++ +CP KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRV ET  QT T+ P
Subjt:  GGDWQKKS-NSSFSFFGLFKSKRT-KIGD-YYDH-------DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEP

A0A5A7SWT9 Uncharacterized protein2.4e-2358.59Show/hide
Query:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM
        M G + QKKS+SSFS F  FKS+R + GD  +H     DE+    KVWPSD DK H WVAEPGIDRKAKDYIDRI+RNRV E+E QT T+ P+  ++N+
Subjt:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDH-----DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein1.8e-0431.25Show/hide
Query:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDHDEITCPR-KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETE
        M G   ++KS+SSFS      ++ +K  D ++ + +   R ++  +D D C   +AEP IDR+A  +I + H   + +TE
Subjt:  MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDHDEITCPR-KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETE

AT3G05858.1 unknown protein8.6e-1042.17Show/hide
Query:  GGDWQKKSNSSFSFFGLFKSKRT-KIGDYYDHDEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFT
        GG  +  S+  FS F  FK++R+ ++      D+    RK   SD DK + WVAEPGIDRKA  +I + H  RV E+E QT +
Subjt:  GGDWQKKSNSSFSFFGLFKSKRT-KIGDYYDHDEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFT

AT5G26620.1 unknown protein9.5e-0955.1Show/hide
Query:  DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQT
        D++   RK W SD DK + WVAEPGIDRKA  +I + H +RV E+E QT
Subjt:  DEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAGGTGATTGGCAAAAGAAATCTAACTCTTCTTTTTCGTTCTTTGGCCTCTTCAAATCAAAGAGGACAAAAATAGGAGACTATTACGACCACGACGAGATTAC
GTGTCCCAGAAAGGTATGGCCAAGCGATGCAGACAAGTGCCACCGTTGGGTTGCCGAGCCTGGCATTGACAGAAAAGCCAAAGATTACATCGACAGGATTCATCGCAACC
GAGTGCTAGAAACTGAAAGCCAAACTTTCACCGTTGAACCCTCGAGAGCTAGAACAAACATGTAA
mRNA sequenceShow/hide mRNA sequence
CCCCACCTTACCATTTCAAACACAAATCTCTCCTAATTTTTCATTCATTTTTCCCATCTTAAAGCACAACTCTCTCTACTACTTTTTCTTCCCAAGAAGAATTTCAAGTT
TCTTTCTTGAAGCCAAAAAGAAAACATGGCCGGAGGTGATTGGCAAAAGAAATCTAACTCTTCTTTTTCGTTCTTTGGCCTCTTCAAATCAAAGAGGACAAAAATAGGAG
ACTATTACGACCACGACGAGATTACGTGTCCCAGAAAGGTATGGCCAAGCGATGCAGACAAGTGCCACCGTTGGGTTGCCGAGCCTGGCATTGACAGAAAAGCCAAAGAT
TACATCGACAGGATTCATCGCAACCGAGTGCTAGAAACTGAAAGCCAAACTTTCACCGTTGAACCCTCGAGAGCTAGAACAAACATGTAAAATCATTATTATTGATCTTT
ATGTCTCTTCTTTTATTGTTGCATCTCTTCCTCTCTTGAAATTCAATTCCAAATTGTGTCAACTTCATGCAATAGTATATTTGGCCACCTTCCATGTATTCCACTTTCAC
TTACATTATTGAAAATAATAAATTAA
Protein sequenceShow/hide protein sequence
MAGGDWQKKSNSSFSFFGLFKSKRTKIGDYYDHDEITCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETESQTFTVEPSRARTNM