; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005505 (gene) of Chayote v1 genome

Gene IDSed0005505
OrganismSechium edule (Chayote v1)
DescriptionDof zinc finger protein
Genome locationLG02:52458780..52459856
RNA-Seq ExpressionSed0005505
SyntenySed0005505
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650669.1 dof zinc finger protein 2 [Cucumis sativus]9.5e-4161.99Show/hide
Query:  MEARMMES---GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS-GNP
        MEA MMES   GGGGG GGG    KG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK  GS  GSGS  +P
Subjt:  MEARMMES---GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS-GNP

Query:  EP------VNDLNLGFVAVA-----------------------------AAAEENSGGNNGYWNGMFGGGP
        +P        DLNLGF   A                             AA EENS GNNGYWNGMFGGGP
Subjt:  EP------VNDLNLGFVAVA-----------------------------AAAEENSGGNNGYWNGMFGGGP

XP_016898925.1 PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo]4.7e-4060.12Show/hide
Query:  MEARMMES-------GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS
        MEA MMES       GGGGG GGG    KG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCKACRRYWT+GGSLRNIPVGGGSRKNRK  GS  GSGS
Subjt:  MEARMMES-------GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS

Query:  -GNPEP------VNDLNLGFVAVAA---------------------------AAEENSGGNNGYWNGMFGGGP
          +P+P        DLNLGF    A                           AA E + GNNGYWNGMFGGGP
Subjt:  -GNPEP------VNDLNLGFVAVAA---------------------------AAEENSGGNNGYWNGMFGGGP

XP_022924713.1 dof zinc finger protein 2-like [Cucurbita moschata]1.4e-3960.71Show/hide
Query:  MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEP--
        MEA MM+SG GGG GGG + AKG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK   S  GS S N  P  
Subjt:  MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEP--

Query:  ----VNDLNLGF----VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW
             +DLNLGF     A AAA  EN G                         G+NGYWNGMF GGPW
Subjt:  ----VNDLNLGF----VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW

XP_022980851.1 dof zinc finger protein 2-like [Cucurbita maxima]2.8e-4059.77Show/hide
Query:  MEARMME---SGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN--
        MEA M     SGGGGG GGG   AKG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK   S  GS S N  
Subjt:  MEARMME---SGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN--

Query:  PEPV---NDLNLGF--------VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW
        P+PV   +DLNLGF         A AAA  EN G                         G+NGYWNGMF GGPW
Subjt:  PEPV---NDLNLGF--------VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW

XP_023527390.1 dof zinc finger protein 2 [Cucurbita pepo subsp. pepo]1.8e-3958.48Show/hide
Query:  MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN---PE
        MEA M    G GG GGG   AKG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK   S  GS S N   P+
Subjt:  MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN---PE

Query:  PV---NDLNLGF-------VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW
        PV   +DLNLGF        A A+A  EN G                         G+NGYWNGMF GGPW
Subjt:  PV---NDLNLGF-------VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW

TrEMBL top hitse value%identityAlignment
A0A0A0L5U8 Dof-type domain-containing protein4.6e-4161.99Show/hide
Query:  MEARMMES---GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS-GNP
        MEA MMES   GGGGG GGG    KG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK  GS  GSGS  +P
Subjt:  MEARMMES---GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS-GNP

Query:  EP------VNDLNLGFVAVA-----------------------------AAAEENSGGNNGYWNGMFGGGP
        +P        DLNLGF   A                             AA EENS GNNGYWNGMFGGGP
Subjt:  EP------VNDLNLGFVAVA-----------------------------AAAEENSGGNNGYWNGMFGGGP

A0A1S4DT96 dof zinc finger protein DOF3.72.3e-4060.12Show/hide
Query:  MEARMMES-------GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS
        MEA MMES       GGGGG GGG    KG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCKACRRYWT+GGSLRNIPVGGGSRKNRK  GS  GSGS
Subjt:  MEARMMES-------GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS

Query:  -GNPEP------VNDLNLGFVAVAA---------------------------AAEENSGGNNGYWNGMFGGGP
          +P+P        DLNLGF    A                           AA E + GNNGYWNGMFGGGP
Subjt:  -GNPEP------VNDLNLGFVAVAA---------------------------AAEENSGGNNGYWNGMFGGGP

A0A5A7U0P5 Dof zinc finger protein DOF3.72.3e-4060.12Show/hide
Query:  MEARMMES-------GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS
        MEA MMES       GGGGG GGG    KG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCKACRRYWT+GGSLRNIPVGGGSRKNRK  GS  GSGS
Subjt:  MEARMMES-------GGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGS

Query:  -GNPEP------VNDLNLGFVAVAA---------------------------AAEENSGGNNGYWNGMFGGGP
          +P+P        DLNLGF    A                           AA E + GNNGYWNGMFGGGP
Subjt:  -GNPEP------VNDLNLGFVAVAA---------------------------AAEENSGGNNGYWNGMFGGGP

A0A6J1ED97 dof zinc finger protein 2-like6.7e-4060.71Show/hide
Query:  MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEP--
        MEA MM+SG GGG GGG + AKG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK   S  GS S N  P  
Subjt:  MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEP--

Query:  ----VNDLNLGF----VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW
             +DLNLGF     A AAA  EN G                         G+NGYWNGMF GGPW
Subjt:  ----VNDLNLGF----VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW

A0A6J1IUS0 dof zinc finger protein 2-like1.3e-4059.77Show/hide
Query:  MEARMME---SGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN--
        MEA M     SGGGGG GGG   AKG  QE+LNCPRCKS NTKFCYYNNYSLTQPRYFCK+CRRYWT+GGSLRNIPVGGGSRKNRK   S  GS S N  
Subjt:  MEARMME---SGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN--

Query:  PEPV---NDLNLGF--------VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW
        P+PV   +DLNLGF         A AAA  EN G                         G+NGYWNGMF GGPW
Subjt:  PEPV---NDLNLGF--------VAVAAAAEENSG-------------------------GNNGYWNGMFGGGPW

SwissProt top hitse value%identityAlignment
Q43385 Dof zinc finger protein DOF3.76.9e-2669.62Show/hide
Query:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK
        +GG GG+   T      K   QEK+NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGG SRKN++
Subjt:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK

Q8LAP8 Dof zinc finger protein DOF4.61.4e-2676.47Show/hide
Query:  GGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK
        GG R A+    + +NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRNIPVGGGSRKN++
Subjt:  GGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK

Q9M161 Dof zinc finger protein DOF4.11.4e-2661.62Show/hide
Query:  TRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDLNLGFVAVAAAAEEN
        TRP     QE  NCPRC S NTKFCYYNNYSL QPRY CK+CRRYWT+GGSLRN+PVGGGSRKN+KL      S S + + + DLN  FV  ++A+  N
Subjt:  TRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDLNLGFVAVAAAAEEN

Q9SXG8 Dof zinc finger protein 11.2e-2559.14Show/hide
Query:  GGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDL
        GG G G   R A+   ++ LNCPRC S NTKFCYYNNYSL QPRYFCK CRRYWT+GGSLRN+PVGGGSRKN++   S   +   +    N +
Subjt:  GGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDL

Q9ZPY0 Dof zinc finger protein DOF2.52.0e-2567.47Show/hide
Query:  KGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN-PEPVNDLN
        K   QEKLNCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGG SRKN++   S   +     P  + DLN
Subjt:  KGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGN-PEPVNDLN

Arabidopsis top hitse value%identityAlignment
AT3G61850.1 Dof-type zinc finger DNA-binding family protein4.9e-2769.62Show/hide
Query:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK
        +GG GG+   T      K   QEK+NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGG SRKN++
Subjt:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK

AT3G61850.2 Dof-type zinc finger DNA-binding family protein4.9e-2769.62Show/hide
Query:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK
        +GG GG+   T      K   QEK+NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGG SRKN++
Subjt:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK

AT3G61850.3 Dof-type zinc finger DNA-binding family protein4.9e-2769.62Show/hide
Query:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK
        +GG GG+   T      K   QEK+NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGG SRKN++
Subjt:  SGGGGGDGGGT---RPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK

AT4G00940.1 Dof-type zinc finger DNA-binding family protein9.9e-2861.62Show/hide
Query:  TRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDLNLGFVAVAAAAEEN
        TRP     QE  NCPRC S NTKFCYYNNYSL QPRY CK+CRRYWT+GGSLRN+PVGGGSRKN+KL      S S + + + DLN  FV  ++A+  N
Subjt:  TRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDLNLGFVAVAAAAEEN

AT4G24060.1 Dof-type zinc finger DNA-binding family protein9.9e-2876.47Show/hide
Query:  GGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK
        GG R A+    + +NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRNIPVGGGSRKN++
Subjt:  GGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGAGGATGATGGAGTCCGGCGGCGGCGGCGGAGATGGCGGAGGGACGAGGCCGGCGAAGGGGAGTGCGCAAGAGAAACTGAACTGCCCAAGGTGCAAA
TCGGGCAACACCAAGTTTTGCTACTACAATAATTACAGCCTCACTCAGCCCAGATATTTCTGCAAAGCTTGCCGCCGGTACTGGACCGACGGCGGTTCTCTAAGA
AACATCCCGGTCGGAGGAGGTTCTCGGAAGAATAGGAAATTGGGGGGTTCCGGTGGCGGGTCGGGTTCGGGCAACCCGGAGCCGGTGAATGATCTGAATTTGGGA
TTTGTGGCGGTGGCGGCGGCGGCGGAAGAGAATTCTGGCGGTAACAATGGGTATTGGAATGGGATGTTTGGGGGAGGGCCGTGGTAG
mRNA sequenceShow/hide mRNA sequence
GGGGATGGTACAATTTAGTCAAAGCATGCACATTCTTTTCATACATTTTTAAATCAAAGAAACCGACACAAAAGGGTCACAAACAAACAACCTAAATCATTCTCT
CTTGCTTGAAGTGCGGCCCATTTCCACACAAAGATTTCAAAAAATGGAAGCGAGGATGATGGAGTCCGGCGGCGGCGGCGGAGATGGCGGAGGGACGAGGCCGGC
GAAGGGGAGTGCGCAAGAGAAACTGAACTGCCCAAGGTGCAAATCGGGCAACACCAAGTTTTGCTACTACAATAATTACAGCCTCACTCAGCCCAGATATTTCTG
CAAAGCTTGCCGCCGGTACTGGACCGACGGCGGTTCTCTAAGAAACATCCCGGTCGGAGGAGGTTCTCGGAAGAATAGGAAATTGGGGGGTTCCGGTGGCGGGTC
GGGTTCGGGCAACCCGGAGCCGGTGAATGATCTGAATTTGGGATTTGTGGCGGTGGCGGCGGCGGCGGAAGAGAATTCTGGCGGTAACAATGGGTATTGGAATGG
GATGTTTGGGGGAGGGCCGTGGTAGAAATATTAATTTAAGAATATGGGACTGGGACATATTAAAATCTTTAGTACATCAATTTAATGTTGGTTTTCTGATTCATA
TATATCTCTTTGGGTTTTTACTTTGTAATTTCCTTTTTCTTTTTCGTTTTGGATTTGACCATGGGGTTTGGTTTGATTTTGTTTGAAGCTTTGTACTAACTAAGA
ATAATTAAGAAAAATAAGTTGATACCGAGGTTTAGTGGCGCAGTTGGTTATCTTGTCTGGTGTTAAACCATTTCAACTCCACGGTCACGATTCGAGCTTGAAAAT
CGGTATTTGACTCTCATATTATTTTAGAGCAGTTGTGCCCTCTATGTAGGGTTTGTTGATCCCCTTCTCCCACTATGTACTAAAAAAAAAGAAAAATAAGTTGAT
CACTAACACTATTCGTATTAAACCCATAGCTTACGC
Protein sequenceShow/hide protein sequence
MEARMMESGGGGGDGGGTRPAKGSAQEKLNCPRCKSGNTKFCYYNNYSLTQPRYFCKACRRYWTDGGSLRNIPVGGGSRKNRKLGGSGGGSGSGNPEPVNDLNLG
FVAVAAAAEENSGGNNGYWNGMFGGGPW