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Sed0005515 (gene) of Chayote v1 genome

Gene IDSed0005515
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein 230
Genome locationLG08:2752986..2755006
RNA-Seq ExpressionSed0005515
SyntenySed0005515
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]5.3e-4796.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLL FGMIGIVVGI MASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]5.8e-4693.2Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLLVFGMIGI+VG  MASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]2.0e-4694.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLLVFGMIGI+VG  MASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]6.9e-4795.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLL FGMIGI+VGI MASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]5.3e-4796.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLLVFGMIGIVVG  MASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2302.8e-4693.2Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLLVFGMIGI+VG  MASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2309.7e-4794.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLLVFGMIGI+VG  MASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2303.3e-4795.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLL FGMIGI+VGI MASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2303.3e-4795.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNR P+KEIALAVSLL FGMIGI+VGI MASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2301.4e-4593.2Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNNR P+KEIALAVSLLVFGMIGIVVG  MASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2303.1e-1045.57Show/hide
Query:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        + P K IALA  L + G   I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2301.8e-1045.57Show/hide
Query:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        + P K IALA  L + G   I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2303.1e-1045.57Show/hide
Query:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        + P K IALAV L + G   I++G ++ +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2303.1e-1045.57Show/hide
Query:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        + P K IALA  L + G   I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2303.1e-1045.57Show/hide
Query:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        + P K IALA  L + G   I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  RAPVKEIALAVSLLVFGMIGIVVGIIMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)2.7e-4177.67Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+M+ + +TV+NR PVKEI+LAV LLVFG +GIV+G  MA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)8.5e-1142.86Show/hide
Query:  NRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        +R P K IALAV LL  G + +++   +    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  NRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)5.8e-4482.52Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIM+++ +TVNNR PVKEIALAV+LLVFG +GIV G  MA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTGGACCATGCGTTTTCCATTACCGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGCGCCCCAGTCAAGGAGATCGCTCTCGCCGTTTC
TCTTCTCGTTTTCGGCATGATTGGAATCGTCGTCGGCATCATCATGGCCAGTAATCGAGTCGGCGGTGATCGCGCTCACGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCTGGTTTCTATTATACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGATTCTCCTTCTCCAATATCCCTCCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
TTTACTTTTCTCAAGCCGACGTGGAAATTTTTGCCTTTCCTTTCACTCCACCTCATATCGGAGTCAAAAACAGCCCGCGAGTTTCTCTTTGCTCCAATAACCCAAAAATC
CCACCGTCGTCGTCGCCGCCGCCGCATCTCGATCTCCGGCGACATCGCCACCTTCTTCTTCCTCCTCAAACCCTAGATCTCCGGCAGTTTCAGTCAAACATGGCGTACGT
GGACCATGCGTTTTCCATTACCGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGCGCCCCAGTCAAGGAGATCGCTCTCGCCGTTTCTCTTCTCGTTT
TCGGCATGATTGGAATCGTCGTCGGCATCATCATGGCCAGTAATCGAGTCGGCGGTGATCGCGCTCACGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCT
GGTTTCTATTATACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGATTCTCCTTCTCCAATATCCCTCCTGTTTAGATTCTTCAAGTTTCAACTGCTTCTCTACA
CTTGTACATATTTTCTTCTCCAGATTTCTTCACTGTTTAAGTTTGCCCTGCCCTATTTTTCTGTTTTGATTACTAATAACAATGTGTCTGTTTACTGTCTATGAATGGTG
AAGGATTCCATGTGAAGTTTCGTAAATTTTCGAGCATAATAGTCTGAAGTTTCTTTACTTTTTTTTTCTAGTTTGTTTGTTGAAATTAGTTAGCCTGATTCAAGTTTATC
CATGACTTACCTAGCC
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFTVNNRAPVKEIALAVSLLVFGMIGIVVGIIMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV