; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005529 (gene) of Chayote v1 genome

Gene IDSed0005529
OrganismSechium edule (Chayote v1)
DescriptionChloroplast thylakoid membrane
Genome locationLG10:29147794..29149832
RNA-Seq ExpressionSed0005529
SyntenySed0005529
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598444.1 hypothetical protein SDJN03_08222, partial [Cucurbita argyrosperma subsp. sororia]3.6e-9682.68Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        MTTIG RL SVP+AVS LS  SH P +D     RH LP++TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQKKKA +FLLAPI+ASRDSL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSNDSDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLEI
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI

KAG7029386.1 hypothetical protein SDJN02_07725 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-9682.68Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        M TIG RL SVP+AVS LS  SH P +D     RH LP++TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQKKKAS+FLLAPI+ASRDSL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSNDSDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLEI
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI

XP_022961866.1 uncharacterized protein LOC111462505 isoform X1 [Cucurbita moschata]1.4e-9582.61Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        MTTIG RL SVP+AVS LS  SH P +D     RH LP++TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQKKKAS+FLLAPI+ASRDSL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSN SDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLE
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLE
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLE

XP_022997500.1 uncharacterized protein LOC111492399 isoform X1 [Cucurbita maxima]6.2e-9683.12Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        MTTIG RL SVP+AVS LS  SH P +D     RH LPI+TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQKKKAS+FLLAPI+ASRDSL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSN SDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLEI
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI

XP_023545902.1 uncharacterized protein LOC111805195 isoform X1 [Cucurbita pepo subsp. pepo]4.3e-9783.55Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        MTTIG RL SVP+AVS LS  SH PNND     RH LPI+TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQK+KAS+FLLAPI+ASR SL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSNDSDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLEI
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI

TrEMBL top hitse value%identityAlignment
A0A0A0LPA8 Uncharacterized protein1.5e-9583.76Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPF---PPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASR
        MTTIG RL SV  AV   SP S +PNND F    P RHQLPI+TSRR L +LSF+SA+PSL  PAPA+AFDI ISGPKDWLKEQKKKASKFLLAPI+ASR
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPF---PPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASR

Query:  DSLHAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETD
        DSL AV LLLSNDSDYS KDMEDVQRLLKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAES LKDLVSSFTSLNSLTYETD
Subjt:  DSLHAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETD

Query:  MQVNSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        +QVNSNRQKVLDALNDT++SLDKFEKGIKDCLEI
Subjt:  MQVNSNRQKVLDALNDTISSLDKFEKGIKDCLEI

A0A1S3BAY8 uncharacterized protein LOC1034879718.2e-9482.05Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPH---RHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASR
        MTTIG RL SVP AV   SP S +PN+D F      RHQLPI+TSRR L +LSF+SAMPSL  PAPA+AFDI ISGPKDWLKEQKKK+SKFLLAPI+ASR
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPH---RHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASR

Query:  DSLHAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETD
        DSL  V LLLSNDSDYS+KDMEDVQRLLKSAARDCVL DR+SFVQFQASTGVEVCTFQLIVKNAASLLG KDP KLEAE+ LKDLVSSFTSLNSL YETD
Subjt:  DSLHAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETD

Query:  MQVNSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        +QVNSNRQKVLDALNDT++SLDKFEKGIKDCLEI
Subjt:  MQVNSNRQKVLDALNDTISSLDKFEKGIKDCLEI

A0A5A7VAP0 Chloroplast thylakoid membrane8.2e-9482.05Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPH---RHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASR
        MTTIG RL SVP AV   SP S +PN+D F      RHQLPI+TSRR L +LSF+SAMPSL  PAPA+AFDI ISGPKDWLKEQKKK+SKFLLAPI+ASR
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPH---RHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASR

Query:  DSLHAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETD
        DSL  V LLLSNDSDYS+KDMEDVQRLLKSAARDCVL DR+SFVQFQASTGVEVCTFQLIVKNAASLLG KDP KLEAE+ LKDLVSSFTSLNSL YETD
Subjt:  DSLHAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETD

Query:  MQVNSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        +QVNSNRQKVLDALNDT++SLDKFEKGIKDCLEI
Subjt:  MQVNSNRQKVLDALNDTISSLDKFEKGIKDCLEI

A0A6J1HBI9 uncharacterized protein LOC111462505 isoform X16.7e-9682.61Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        MTTIG RL SVP+AVS LS  SH P +D     RH LP++TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQKKKAS+FLLAPI+ASRDSL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSN SDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLE
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLE
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLE

A0A6J1K9U3 uncharacterized protein LOC111492399 isoform X13.0e-9683.12Show/hide
Query:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL
        MTTIG RL SVP+AVS LS  SH P +D     RH LPI+TSRR L +LSFLSAMPSL  PAPA AFDI ISGPKDWL+EQKKKAS+FLLAPI+ASRDSL
Subjt:  MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSL

Query:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV
        HAV L+LSN SDYS+KDMEDVQR+LKSAARDCVL DRNSFVQFQASTGVEVCTFQLIVKNAASLLG +DP KLEAESRLKDLVSSFTSLNSL YETD+QV
Subjt:  HAVLLLLSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQV

Query:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI
        NSNRQKVLDA+NDTI SLDKFEKGIKDCLEI
Subjt:  NSNRQKVLDALNDTISSLDKFEKGIKDCLEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42765.1 INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.5e-5553.78Show/hide
Query:  VSLLSPFSHTPNNDPFPPH------RHQLPISTSRRRLAVL--SFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSLHAVLLL
        + +  PF  +    P PP          LP   SRR   VL  S  S + +L    PA AF + ISGPK+WLK+QKKK+S+FLLAPIDA+R +L +  L 
Subjt:  VSLLSPFSHTPNNDPFPPH------RHQLPISTSRRRLAVL--SFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSLHAVLLL

Query:  LSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQVNSNRQK
        L+++SDY++KD+E++Q L KS+ARDCV  +R+S V FQ+ +GVEVCTF+L+VKNAASLL  KDP KLEAE+ L DLV SF SL  LT   DM + S+R+K
Subjt:  LSNDSDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQVNSNRQK

Query:  VLDALNDTISSLDKFEKGIKDCLEI
        V D + +TIS LDKFEKG+KDCLEI
Subjt:  VLDALNDTISSLDKFEKGIKDCLEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACGATCGGACTCCGCCTTAACTCGGTTCCAACCGCCGTCTCACTGCTCTCCCCATTTTCTCACACTCCGAACAATGATCCATTCCCACCGCACCGCCACCAACT
TCCGATCTCAACCTCTCGCCGACGCCTCGCCGTGCTCTCATTTCTCTCCGCCATGCCGTCGCTGCTCCGACCTGCTCCCGCCGCCGCTTTCGATATCCGCATTTCAGGAC
CGAAGGATTGGCTGAAGGAGCAGAAGAAGAAGGCCTCCAAATTTCTCCTGGCGCCGATCGATGCCTCTAGAGATAGCCTTCACGCAGTTCTTCTGTTGCTTTCCAATGAT
TCCGATTATTCAGACAAGGATATGGAGGATGTTCAAAGGCTGCTTAAATCTGCTGCGAGGGATTGCGTTTTGACGGATAGGAATTCCTTTGTTCAATTTCAAGCAAGCAC
AGGAGTCGAGGTTTGCACATTTCAATTGATTGTGAAAAATGCTGCCTCCTTGCTTGGAAAAAAAGATCCTACGAAACTAGAAGCTGAAAGTCGGTTAAAAGATCTAGTAA
GCTCGTTCACTTCTCTTAATAGTCTCACATATGAAACTGATATGCAAGTCAATTCCAACAGACAAAAAGTACTGGATGCACTAAATGATACCATATCTTCCCTTGACAAA
TTTGAGAAGGGTATTAAGGATTGTCTTGAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACGATCGGACTCCGCCTTAACTCGGTTCCAACCGCCGTCTCACTGCTCTCCCCATTTTCTCACACTCCGAACAATGATCCATTCCCACCGCACCGCCACCAACT
TCCGATCTCAACCTCTCGCCGACGCCTCGCCGTGCTCTCATTTCTCTCCGCCATGCCGTCGCTGCTCCGACCTGCTCCCGCCGCCGCTTTCGATATCCGCATTTCAGGAC
CGAAGGATTGGCTGAAGGAGCAGAAGAAGAAGGCCTCCAAATTTCTCCTGGCGCCGATCGATGCCTCTAGAGATAGCCTTCACGCAGTTCTTCTGTTGCTTTCCAATGAT
TCCGATTATTCAGACAAGGATATGGAGGATGTTCAAAGGCTGCTTAAATCTGCTGCGAGGGATTGCGTTTTGACGGATAGGAATTCCTTTGTTCAATTTCAAGCAAGCAC
AGGAGTCGAGGTTTGCACATTTCAATTGATTGTGAAAAATGCTGCCTCCTTGCTTGGAAAAAAAGATCCTACGAAACTAGAAGCTGAAAGTCGGTTAAAAGATCTAGTAA
GCTCGTTCACTTCTCTTAATAGTCTCACATATGAAACTGATATGCAAGTCAATTCCAACAGACAAAAAGTACTGGATGCACTAAATGATACCATATCTTCCCTTGACAAA
TTTGAGAAGGGTATTAAGGATTGTCTTGAAATTTAA
Protein sequenceShow/hide protein sequence
MTTIGLRLNSVPTAVSLLSPFSHTPNNDPFPPHRHQLPISTSRRRLAVLSFLSAMPSLLRPAPAAAFDIRISGPKDWLKEQKKKASKFLLAPIDASRDSLHAVLLLLSND
SDYSDKDMEDVQRLLKSAARDCVLTDRNSFVQFQASTGVEVCTFQLIVKNAASLLGKKDPTKLEAESRLKDLVSSFTSLNSLTYETDMQVNSNRQKVLDALNDTISSLDK
FEKGIKDCLEI