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Sed0005537 (gene) of Chayote v1 genome

Gene IDSed0005537
OrganismSechium edule (Chayote v1)
DescriptionGamma-secretase subunit PEN-2
Genome locationLG05:46159567..46165505
RNA-Seq ExpressionSed0005537
SyntenySed0005537
Gene Ontology termsGO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931973.1 probable gamma-secretase subunit PEN-2 [Cucurbita moschata]1.7e-6286.99Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        ME+SQ        N N NPNPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFAVFM IISSWALTFAIGGE LFGPVWDKLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

XP_022946973.1 probable gamma-secretase subunit PEN-2 [Cucurbita moschata]1.5e-6385.62Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        MESSQNP+T        NPN NP+RIQN VSS IAALWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFA+FM IISSWALTF+IGGE LFGPVW+KLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]6.3e-6286.99Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        ME+SQ        N N N NPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SRSFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFAVFM IISSWALTFAIGGE LFGPVWDKLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

XP_023532347.1 probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo]5.2e-6489.71Show/hide
Query:  TNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIIS
        ++PNPN NPN NP RIQN VSS IAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS IGFA+FM IIS
Subjt:  TNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIIS

Query:  SWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        SWALTF+IGGE LFGPVW+KLVMYNLADKLGLTGWS
Subjt:  SWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

XP_038900346.1 probable gamma-secretase subunit PEN-2 [Benincasa hispida]1.5e-6387.67Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        MESSQNP+TNTN NPNPN      RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SRSFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GF VFM IISSWALTF+IGGE LFG VWDKLVMYNLAD+LGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

TrEMBL top hitse value%identityAlignment
A0A6J1DR09 probable gamma-secretase subunit PEN-23.2e-5982.19Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        ME SQNP  NTNPNP              VSSPIAALWPTID SLGLSEEESVSYAR FYKFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFAVFM I+SSWALTFAIGGE LFGPVWDKLVMYN+ADKLGLTGW+
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-28.0e-6386.99Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        ME+SQ        N N NPNPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFAVFM IISSWALTFAIGGE LFGPVWDKLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1G5B2 probable gamma-secretase subunit PEN-27.3e-6485.62Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        MESSQNP+T        NPN NP+RIQN VSS IAALWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFA+FM IISSWALTF+IGGE LFGPVW+KLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-23.1e-6286.99Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        ME+SQ        N N N NPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SRSFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFAVFM IISSWALTFAIGGE LFGPVWDKLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1L2H7 probable gamma-secretase subunit PEN-24.0e-6284.93Show/hide
Query:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI
        MESSQNP+T         PN NP+RIQN VSS IAALWPTID SLGLS EESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS I
Subjt:  MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGI

Query:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
        GFAVFM IISSWALTF+IGGE LFGPVW+KLVMYNLADKLGLTGWS
Subjt:  GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS

SwissProt top hitse value%identityAlignment
Q5G235 Gamma-secretase subunit PEN-27.1e-0834.04Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  S +GF ++++++S+W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY

Q6QI68 Gamma-secretase subunit PEN-22.1e-0731.87Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSF---PRIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+     + ++    +I+ Y+  S +GF  +++++++W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSF---PRIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY

Q9CQR7 Gamma-secretase subunit PEN-22.1e-0734.04Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  S +GF  +++I+++W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY

Q9FY84 Probable gamma-secretase subunit PEN-26.8e-5167.12Show/hide
Query:  MESSQNPDTNTNP--NPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGS
        ME++++ D + NP  N NPNPNPNP+ +   +SS  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V S
Subjt:  MESSQNPDTNTNP--NPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGS

Query:  GIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTG
         IGF+VF  ++S+WALTF+IGGE LFGP++DKLVMYN+AD+LGL+G
Subjt:  GIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTG

Q9NZ42 Gamma-secretase subunit PEN-29.3e-0834.04Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  S +GF  ++++++SW   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY

Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).4.8e-5267.12Show/hide
Query:  MESSQNPDTNTNP--NPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGS
        ME++++ D + NP  N NPNPNPNP+ +   +SS  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V S
Subjt:  MESSQNPDTNTNP--NPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGS

Query:  GIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTG
         IGF+VF  ++S+WALTF+IGGE LFGP++DKLVMYN+AD+LGL+G
Subjt:  GIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTCGCAGAATCCTGATACAAACACCAATCCAAACCCTAACCCTAACCCTAACCCTAACCCCGATCGAATTCAGAATCGCGTATCGTCACCGATTGCTGCGTT
ATGGCCGACCATTGATGGCTCACTAGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTA
ATTGCTTCTACTTCTGGCCTGTTCTCCGGGATTCTCGTTCATTTCCTCGCATCCGACCCTATATTGTTGGGTCAGGTATTGGATTTGCTGTTTTCATGGTCATTATCTCT
TCTTGGGCCTTGACATTTGCCATTGGTGGAGAAGGCCTGTTTGGGCCTGTTTGGGATAAACTTGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTA
G
mRNA sequenceShow/hide mRNA sequence
CTAAAACTAAAAATAAAATAAGAGGAGAAGAATATTTGGGCGACAAATTCGGTTACTCGTTATCTCCCAGTCATTGAATTCGTCTGCAATGGAGAGCTCGCAGAATCCTG
ATACAAACACCAATCCAAACCCTAACCCTAACCCTAACCCTAACCCCGATCGAATTCAGAATCGCGTATCGTCACCGATTGCTGCGTTATGGCCGACCATTGATGGCTCA
CTAGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGT
TCTCCGGGATTCTCGTTCATTTCCTCGCATCCGACCCTATATTGTTGGGTCAGGTATTGGATTTGCTGTTTTCATGGTCATTATCTCTTCTTGGGCCTTGACATTTGCCA
TTGGTGGAGAAGGCCTGTTTGGGCCTGTTTGGGATAAACTTGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAGTCTCTGTTTCCCCCTTCCTTT
CAGCATCATTTTATAGACCTATCTTGTATATTTCAAAATGTGCAACTCTACTGTCATCCTTTTCTCCAAAGATCAAAGTTAAGCCTTTTGGTTTTACTTCTCCAAATGCT
TCAAGGTTCAAACATAAACCTGGAGAGGTGCTCATTTCAGAGTTTTCTTTCACTCTTTTCAGAAACAAAAGGGATCCCAGTTGTGAACTTAATCCACATGACCAAATTTG
GGTTAAAACGCGAATTCACTTTGCCATGGCAATGCTTGTTATTGGTCACTGCAAATCGGCTGTTCCTAGCTGTGCGTTTTGTGGATTGAGAACTAGACTGGATCTTTTTG
TTTCTCATTTGCTTCCCTTTTCTCCTGCTTTCAATACTATAAACTGTGCCATCTTGATGACGAAATGAATATCGACGAACAATACACACATGTTTATGTGATTCATTGAT
GTTGATGGTGTTAGCTATCTTAACGGG
Protein sequenceShow/hide protein sequence
MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIIS
SWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS