; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005555 (gene) of Chayote v1 genome

Gene IDSed0005555
OrganismSechium edule (Chayote v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationLG02:52691027..52692084
RNA-Seq ExpressionSed0005555
SyntenySed0005555
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004504530.1 protein transport protein Sec61 subunit beta-like [Cicer arietinum]3.9e-2787.95Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GGGGPQRGSAAATASMRRR+T   +G    GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

XP_011650635.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.2e-2893.98Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GGGGPQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

XP_022146520.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]3.9e-2790.36Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GG  PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

XP_022950482.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata]7.8e-2891.57Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GGG PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

XP_038875187.1 protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]3.9e-2790.36Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GG  PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

TrEMBL top hitse value%identityAlignment
A0A0A0L6Y8 Protein transport protein Sec61 subunit beta5.8e-2993.98Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GGGGPQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

A0A6J1EFZ9 Protein transport protein Sec61 subunit beta1.9e-2790.36Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GG  PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

A0A6J1GEY3 Protein transport protein Sec61 subunit beta3.8e-2891.57Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GGG PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

A0A6J1IH25 Protein transport protein Sec61 subunit beta3.8e-2891.57Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GGG PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

A0A6J1J088 Protein transport protein Sec61 subunit beta1.9e-2790.36Show/hide
Query:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR
        MA+GG  PQRGSAAATASMRRRRT +SSGTS  GGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRR
Subjt:  MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRR

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta1.2e-0747.95Show/hide
Query:  GGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        GG     +    A   RRR    SG SG   A    + FYTDD PG K+SP VV+ MS+ FIAFV +LHV+GK
Subjt:  GGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

P38389 Protein transport protein Sec61 subunit beta1.5e-2682.72Show/hide
Query:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        VG G PQRGSAAATASMRRR+  S +G  G  GGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

P60467 Protein transport protein Sec61 subunit beta1.1e-0546.15Show/hide
Query:  GGGPQRGSAA-ATASMRRRRTGSSSGTSGGG----GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        G  P +  AA A  S  R+R  +S GT   G       G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GGGPQRGSAA-ATASMRRRRTGSSSGTSGGG----GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

Q54YR4 Protein transport protein Sec61 subunit beta3.0e-0649.15Show/hide
Query:  MRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        M+R  T  +  T   GG   +M++FY++DA GLK+ P  VL MS+ FIAFV +LH+MGK
Subjt:  MRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

Q9HFC7 Protein transport protein Sec61 subunit beta8.7e-0640.26Show/hide
Query:  GGPQRGSAAATASMRRRRTGSSSGTS----GGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKL
        GGP         + R+    S   TS    G GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K+
Subjt:  GGPQRGSAAATASMRRRRTGSSSGTS----GGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKL

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein1.1e-2782.72Show/hide
Query:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        VG G PQRGSAAATASMRRR+  S +G  G  GGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein1.1e-2782.72Show/hide
Query:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        VG G PQRGSAAATASMRRR+  S +G  G  GGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein1.1e-2782.72Show/hide
Query:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        VG G PQRGSAAATASMRRR+  S +G  G  GGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  VGGGGPQRGSAAATASMRRRRTGSSSGTSG-GGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein2.2e-2883.75Show/hide
Query:  VGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        VGGG PQRGSAAATASMRRR+   + G+S  GG AGTMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  VGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT3G60540.2 Preprotein translocase Sec, Sec61-beta subunit protein2.2e-2883.75Show/hide
Query:  VGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        VGGG PQRGSAAATASMRRR+   + G+S  GG AGTMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  VGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTGGTGGAGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCGAGCATGCGCAGACGAAGGACGGGAAGTTCTTCGGGTACATCGGGAGGAGGAGGGGCGGC
TGGTACAATGCTGCAATTTTACACGGATGATGCACCTGGCCTCAAGATATCCCCCAATGTGGTTCTGGTAATGAGCATTGGTTTCATTGCATTTGTTGCTGTTCTCCATG
TCATGGGTAAGCTCTACTTCGTGCGAAGAGGAGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
GCAGGCTGCGCCTAAAAATCAAAATCTATGAATTAGGAATTAGTTCTGGTCTCAAACAACAACCGATCATCCGTTGAAGGCTCTGTGGATCCCTAAATCTTGAATTTGAG
TCAGAGAATGGCAGTTGGTGGAGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCGAGCATGCGCAGACGAAGGACGGGAAGTTCTTCGGGTACATCGGGAGGAGGAG
GGGCGGCTGGTACAATGCTGCAATTTTACACGGATGATGCACCTGGCCTCAAGATATCCCCCAATGTGGTTCTGGTAATGAGCATTGGTTTCATTGCATTTGTTGCTGTT
CTCCATGTCATGGGTAAGCTCTACTTCGTGCGAAGAGGAGAAGCCTAGCTACTCCCCTTTTCCCCCATTTTCATTTTTATCTCAATTCTCTCCCAGACTGTTCTTTTGTT
ACACTAAAAACTGATTTGGATTTTGTTGCTAGTTTTTACAATGATAGCTACTCTGCTTTGATCTGC
Protein sequenceShow/hide protein sequence
MAVGGGGPQRGSAAATASMRRRRTGSSSGTSGGGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRRGEA