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Sed0005589 (gene) of Chayote v1 genome

Gene IDSed0005589
OrganismSechium edule (Chayote v1)
DescriptionMajor viral transcription factor
Genome locationLG05:40536209..40536550
RNA-Seq ExpressionSed0005589
SyntenySed0005589
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061869.1 uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa]8.1e-3369.05Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSV---SENTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        MENE K +LPKPPTRLQKQAP SLHLDQLSSVS+   S +T SKAILPLLSPLP SPQ LP          GNAV GGGG+ GD RGIGF   GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSV---SENTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        +  TF DPS  FT F+SQCIVSSNTP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

KAG6570684.1 hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2657.94Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSV---SVSENTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        M+N++  ++PKPPTRLQKQAP  L+LDQLSSV   SV   T SK +LPLLSPLPSSPQ  P          GN VN GG   GD RGI FA  GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSV---SVSENTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        +  T+ADPS  FT F+S+CI++S+TP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3065.87Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENT---SSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        ME E KS+LPKPPTRLQKQAP SLHLDQL+SVS+S  +   SSKAILPLLSPLPSSPQ  P          GN V+GG    GD RGI FA  GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENT---SSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        + TTFADPS  FT F+SQCIV+S TP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]3.1e-3267.46Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENTS---SKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        MENE K +LPKPPTRLQKQAP SLHLDQLSSVS+S  ++   SKAILPLLSPLP SPQ LP          GNAV+GGGG+ GD RGIGF   GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENTS---SKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        +  TF DPS  FT F+SQC+VSSNTP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]3.6e-3368.25Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSE---NTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        MENE K++LPKPPTRLQKQAP SLHLDQLSSVS+S    +T SKAILPLLSPLP SPQ LP          GNA +GGGG+ GD RGIGFA  GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSE---NTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        +  TF DPS  FT F+SQCIV+SNTP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

TrEMBL top hitse value%identityAlignment
A0A068UKW1 Uncharacterized protein3.6e-1042.61Show/hide
Query:  KPPTRLQKQAPPSLHLDQLSSVS-------VSENTSSKAILPLLSPLP------SSPQHLPGNAVNGGGGSGG-----DLRGIG-FAGSGGWKHPAMETT
        KPPTRLQKQAP +LHLD + + S         E+ SS A +PLLSP+P       +P    G+   G G SGG     + +  G  + SGGW+HPA+ T 
Subjt:  KPPTRLQKQAPPSLHLDQLSSVS-------VSENTSSKAILPLLSPLP------SSPQHLPGNAVNGGGGSGG-----DLRGIG-FAGSGGWKHPAMETT

Query:  FADPSNQFTLFRSQC
          +PS  F +F+SQC
Subjt:  FADPSNQFTLFRSQC

A0A0A0KBQ7 Uncharacterized protein1.5e-3267.46Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENTS---SKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        MENE K +LPKPPTRLQKQAP SLHLDQLSSVS+S  ++   SKAILPLLSPLP SPQ LP          GNAV+GGGG+ GD RGIGF   GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENTS---SKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        +  TF DPS  FT F+SQC+VSSNTP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

A0A5A7V856 Uncharacterized protein3.9e-3369.05Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSV---SENTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA
        MENE K +LPKPPTRLQKQAP SLHLDQLSSVS+   S +T SKAILPLLSPLP SPQ LP          GNAV GGGG+ GD RGIGF   GGW+HPA
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSV---SENTSSKAILPLLSPLPSSPQHLP----------GNAVNGGGGSGGDLRGIGFAGSGGWKHPA

Query:  METTFADPSNQFTLFRSQCIVSSNTP
        +  TF DPS  FT F+SQCIVSSNTP
Subjt:  METTFADPSNQFTLFRSQCIVSSNTP

A0A6J1D5B7 uncharacterized protein LOC1110170711.6e-1046.92Show/hide
Query:  ENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVS---ENTSSKAILPLLSPLPSSPQHLP--------------GNAVNGGGGSGGDL-RGIGFA-----
        E++ KS++PKPPTRLQKQAP SLHLDQ+SS S++     TSSKAILPLLSPLP SPQ  P               NAV+GGG   G++ R   F      
Subjt:  ENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVS---ENTSSKAILPLLSPLPSSPQHLP--------------GNAVNGGGGSGGDL-RGIGFA-----

Query:  ---GSG----GWKHPAMETTFADPSNQFTL
           G+G     WK        ADPS +FT+
Subjt:  ---GSG----GWKHPAMETTFADPSNQFTL

A0A6P3ZH11 uncharacterized protein LOC1074110181.6e-1045.3Show/hide
Query:  MENEQKSKLPKPPTRLQKQAPPSLHLDQL--SSVSVSENTSSKAILPLLSPLPSSPQHLPGNAVNGGGGSGGDLRGIGFAGS-------GGWKHPAMETT
        +  ++++K  KPPTRLQK+AP SL LDQ+  S+ + S N +SKAI PLLSPL  SPQ LP        G   D   +    S        GW+HPA+ TT
Subjt:  MENEQKSKLPKPPTRLQKQAPPSLHLDQL--SSVSVSENTSSKAILPLLSPLPSSPQHLPGNAVNGGGGSGGDLRGIGFAGS-------GGWKHPAMETT

Query:  FADPSNQFTLFRSQCIV
        F DPS+ F  F+SQC++
Subjt:  FADPSNQFTLFRSQCIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGAACAGAAATCGAAATTACCTAAACCTCCGACCAGATTGCAAAAACAGGCGCCGCCTAGCCTTCATCTCGATCAACTTTCGAGCGTCTCAGTGTCCGAAAA
TACATCTTCGAAGGCGATTCTTCCTCTCCTATCGCCGCTCCCTTCGTCGCCACAGCATTTGCCTGGAAATGCCGTTAACGGCGGCGGTGGCAGCGGCGGCGATCTTAGAG
GTATAGGTTTTGCAGGTTCTGGTGGCTGGAAACATCCGGCGATGGAGACGACATTTGCAGATCCTTCAAATCAGTTTACTTTGTTTCGATCGCAATGCATTGTAAGCAGC
AACACGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACGAACAGAAATCGAAATTACCTAAACCTCCGACCAGATTGCAAAAACAGGCGCCGCCTAGCCTTCATCTCGATCAACTTTCGAGCGTCTCAGTGTCCGAAAA
TACATCTTCGAAGGCGATTCTTCCTCTCCTATCGCCGCTCCCTTCGTCGCCACAGCATTTGCCTGGAAATGCCGTTAACGGCGGCGGTGGCAGCGGCGGCGATCTTAGAG
GTATAGGTTTTGCAGGTTCTGGTGGCTGGAAACATCCGGCGATGGAGACGACATTTGCAGATCCTTCAAATCAGTTTACTTTGTTTCGATCGCAATGCATTGTAAGCAGC
AACACGCCGTGA
Protein sequenceShow/hide protein sequence
MENEQKSKLPKPPTRLQKQAPPSLHLDQLSSVSVSENTSSKAILPLLSPLPSSPQHLPGNAVNGGGGSGGDLRGIGFAGSGGWKHPAMETTFADPSNQFTLFRSQCIVSS
NTP