; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005605 (gene) of Chayote v1 genome

Gene IDSed0005605
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 finger protein ATL80
Genome locationLG01:18042023..18043188
RNA-Seq ExpressionSed0005605
SyntenySed0005605
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608649.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7983.68Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LA  NSS+ SDT E +RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD G    TRPPPPP SNKGLKKKILRSLPKY F AEFAA+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILV SQCQKCGG   PASSSSN GG+ESRVK+EGEDKR NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

XP_004145558.1 RING-H2 finger protein ATL8 [Cucumis sativus]1.3e-8085.26Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRG--DFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LAGVNSSATSDT E  RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD G    TRPPPPP SNKGLKKKILRSLPKY F AEF+A+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRG--DFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVKEEG+DK  NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

XP_008453009.1 PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]3.0e-8085.26Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LAGVNSSATSDT E  RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD      TRPPPPP SNKGLKKKILRSLPKY F AEF+A+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVKEEG+DK  NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

XP_022941514.1 RING-H2 finger protein ATL80-like [Cucurbita moschata]1.5e-7983.68Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MR  R+LA  NSS+ SDT E +RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD G    TRPPPPP SNKGLKKKILRSLPKY F AEFAA+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVK+EGEDKR NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

XP_023523429.1 RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo]2.7e-8184.74Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LA  NSS+ SDT E +RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGDRG    TRPPPPP SNKGLKKKILRSLPKY F AEFAA+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVK+EGEDKR NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y2 RING-type domain-containing protein6.5e-8185.26Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRG--DFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LAGVNSSATSDT E  RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD G    TRPPPPP SNKGLKKKILRSLPKY F AEF+A+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRG--DFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVKEEG+DK  NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

A0A1S3BWC1 RING-H2 finger protein ATL801.4e-8085.26Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LAGVNSSATSDT E  RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD      TRPPPPP SNKGLKKKILRSLPKY F AEF+A+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVKEEG+DK  NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

A0A5A7VGL3 RING-H2 finger protein ATL801.4e-8085.26Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LAGVNSSATSDT E  RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD      TRPPPPP SNKGLKKKILRSLPKY F AEF+A+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVKEEG+DK  NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

A0A6J1FA06 RING-H2 finger protein ATL80-like7.1e-8083.68Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MRP R+LAGVNSSA SD+ E Q YDSDFVIILAALLCALICVLGLVAVARCAWLR LAG+   G  TRPPPPP SNKGLKKKILRSLPKY F AEF+A+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGD--RGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVKEEG+DK  +RFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

A0A6J1FNK0 RING-H2 finger protein ATL80-like7.1e-8083.68Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF
        MR  R+LA  NSS+ SDT E +RYDSDFVIILAALLCALICVLGLVAVARCAWLR LAGD G    TRPPPPP SNKGLKKKILRSLPKY F AEFAA+F
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGD--FTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHVSCID WF++HSSCPSCRQILVVSQCQKCGG   PASSSSN GG+ESRVK+EGEDKR NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL448.0e-3655.56Show/hide
Query:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPKYAF--------AAEFAARFSDCAICLAEFAVG
        E+   +SD V+IL+ALLCALICV GL AV RCAWLRR       FT     P  NKGLKKK L+SLP+  F        AA      ++CAICL +FA G
Subjt:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPKYAF--------AAEFAARFSDCAICLAEFAVG

Query:  DEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG
        +EIRVLP CGH FHV CIDKW  + SSCPSCR+IL   +C +CG
Subjt:  DEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG

Q8LC69 RING-H2 finger protein ATL86.7e-5157.84Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAG-DRGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEF--AAR
        M  L F     +++TS       ++SD V+ILA LLCAL C++GL+AV+RCAWLRR+A  +R D T PPP   +NKGLKKK+LRSLPK  ++ +   A +
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAG-DRGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEF--AAR

Query:  FSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK--EEGED
          +CAICL EFA GDE+RVLPQCGHGFHVSCID W  +HSSCPSCRQILVV++C KCGG  LP SSSS G   ++R+K  E+G D
Subjt:  FSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK--EEGED

Q9FLC6 RING-H2 finger protein ATL739.8e-2641.88Show/hide
Query:  ATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCA--WLRRLAGDRGDFTRPPPPPPSN----KGLKKKILRSLPKYAFAAEFAARFSDCAICLAE
        + S+   +   D+  VIILAALLCALIC LG+ +V RC     RR       FT    P  +N    KG+KK+ L+ +P  +++ E   + ++C ICL +
Subjt:  ATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCA--WLRRLAGDRGDFTRPPPPPPSN----KGLKKKILRSLPKYAFAAEFAARFSDCAICLAE

Query:  FAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNG
        F  G+ +RVLP+C HGFHV CID W  +HSSCP+CRQ L+  Q         PA+ S  G
Subjt:  FAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNG

Q9LM69 RING-H2 finger protein ATL808.8e-5158.46Show/hide
Query:  RFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRL-AGDR---GDFTRPPPPP--PSNKGLKKKILRSLPKYAFAAEF--AA
        R L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLRRL AG+R   G  T+ P PP   +NKGLKKK+L+SLPK  F+ E   + 
Subjt:  RFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRL-AGDR---GDFTRPPPPP--PSNKGLKKKILRSLPKYAFAAEF--AA

Query:  RFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK---EEGEDKRNNRFLP
        +F++CAICLAEF+ GDE+RVLPQCGHGFHV+CID W  +HSSCPSCRQILVV++C KCGG  LP SSSS G  SE  ++   ++GED  N+ FLP
Subjt:  RFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK---EEGEDKRNNRFLP

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL457.2e-3753.29Show/hide
Query:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPK--YAFAAEFAARFSD--------------CAI
        E+   ++D V+IL+ALLCAL+CV GL AVARCAWLRRL G         PPP  NKGLKKK L++LPK  Y  +A  AA   D              CAI
Subjt:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPK--YAFAAEFAARFSD--------------CAI

Query:  CLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG
        C+ EF+ G+EIR+LP C H FHV+CIDKW  + SSCPSCR+ILV  +C +CG
Subjt:  CLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein6.2e-5258.46Show/hide
Query:  RFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRL-AGDR---GDFTRPPPPP--PSNKGLKKKILRSLPKYAFAAEF--AA
        R L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLRRL AG+R   G  T+ P PP   +NKGLKKK+L+SLPK  F+ E   + 
Subjt:  RFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRL-AGDR---GDFTRPPPPP--PSNKGLKKKILRSLPKYAFAAEF--AA

Query:  RFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK---EEGEDKRNNRFLP
        +F++CAICLAEF+ GDE+RVLPQCGHGFHV+CID W  +HSSCPSCRQILVV++C KCGG  LP SSSS G  SE  ++   ++GED  N+ FLP
Subjt:  RFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK---EEGEDKRNNRFLP

AT1G76410.1 RING/U-box superfamily protein4.8e-5257.84Show/hide
Query:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAG-DRGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEF--AAR
        M  L F     +++TS       ++SD V+ILA LLCAL C++GL+AV+RCAWLRR+A  +R D T PPP   +NKGLKKK+LRSLPK  ++ +   A +
Subjt:  MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAG-DRGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEF--AAR

Query:  FSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK--EEGED
          +CAICL EFA GDE+RVLPQCGHGFHVSCID W  +HSSCPSCRQILVV++C KCGG  LP SSSS G   ++R+K  E+G D
Subjt:  FSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVK--EEGED

AT2G17450.1 RING-H2 finger A3A5.7e-3755.56Show/hide
Query:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPKYAF--------AAEFAARFSDCAICLAEFAVG
        E+   +SD V+IL+ALLCALICV GL AV RCAWLRR       FT     P  NKGLKKK L+SLP+  F        AA      ++CAICL +FA G
Subjt:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPKYAF--------AAEFAARFSDCAICLAEFAVG

Query:  DEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG
        +EIRVLP CGH FHV CIDKW  + SSCPSCR+IL   +C +CG
Subjt:  DEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG

AT4G35480.1 RING-H2 finger A3B5.1e-3853.29Show/hide
Query:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPK--YAFAAEFAARFSD--------------CAI
        E+   ++D V+IL+ALLCAL+CV GL AVARCAWLRRL G         PPP  NKGLKKK L++LPK  Y  +A  AA   D              CAI
Subjt:  ELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPK--YAFAAEFAARFSD--------------CAI

Query:  CLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG
        C+ EF+ G+EIR+LP C H FHV+CIDKW  + SSCPSCR+ILV  +C +CG
Subjt:  CLAEFAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCG

AT5G05280.1 RING/U-box superfamily protein6.9e-2741.88Show/hide
Query:  ATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCA--WLRRLAGDRGDFTRPPPPPPSN----KGLKKKILRSLPKYAFAAEFAARFSDCAICLAE
        + S+   +   D+  VIILAALLCALIC LG+ +V RC     RR       FT    P  +N    KG+KK+ L+ +P  +++ E   + ++C ICL +
Subjt:  ATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCA--WLRRLAGDRGDFTRPPPPPPSN----KGLKKKILRSLPKYAFAAEFAARFSDCAICLAE

Query:  FAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNG
        F  G+ +RVLP+C HGFHV CID W  +HSSCP+CRQ L+  Q         PA+ S  G
Subjt:  FAVGDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCCCCTTAGGTTCCTCGCCGGCGTCAACTCCTCCGCCACCTCCGACACGGGGGAGCTCCAGAGGTACGACTCCGACTTCGTCATAATCCTCGCCGCTCTTCTCTG
CGCCTTGATTTGCGTTCTCGGCCTCGTCGCCGTCGCCCGATGCGCTTGGCTGCGCCGCCTCGCCGGCGATCGCGGCGATTTCACCCGTCCTCCTCCGCCTCCGCCCTCCA
ACAAAGGCCTCAAGAAGAAGATCCTGAGATCTCTTCCTAAGTACGCCTTCGCCGCCGAGTTTGCCGCTCGGTTCTCGGACTGCGCGATCTGTTTGGCGGAGTTCGCCGTC
GGCGATGAAATCCGCGTGCTGCCGCAGTGCGGCCATGGATTTCACGTTTCCTGCATCGACAAATGGTTCAAAACTCACTCCTCCTGTCCTTCGTGCCGCCAGATTCTGGT
GGTGAGTCAGTGCCAGAAGTGCGGCGGCGGCGTTTTGCCGGCGAGCTCGAGTTCGAACGGCGGAGGGAGCGAATCGAGAGTAAAAGAGGAAGGAGAAGATAAGAGGAATA
ATAGGTTCTTACCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCATGTGTAGAAAACAATCATACCCTACGTATGAGGAGGGGAAATAAGTAGTCACCAATTTTACGGGCAATACAATGTAAACATAGGGAGAAAGGTTTCTGGTCAAGAA
GGAATTTGAACTTTTTGACTTTGGAGGTAAGGGTGAACATCAATTACTTATTAAGCTTAGTTTGGGTAACTAATTTACATAAACGGCGTTAGAGCTGAGAAAACGGATTC
TCGTGTTCAGTATAAAGGCCCCTAAAATTCCCTCGAAACGACAGACGTTACGCCCACATTTCATTCAAAACGACTCTTCTTCCCATTTCCTTTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCATCTCTCGCCGCTTCAAATGCGTCCCCTTAGGTTCCTCGCCGGCGTCAACTCCTCCGCCACCTCCGACACGGGGGAGCTCCAGAGGTACGAC
TCCGACTTCGTCATAATCCTCGCCGCTCTTCTCTGCGCCTTGATTTGCGTTCTCGGCCTCGTCGCCGTCGCCCGATGCGCTTGGCTGCGCCGCCTCGCCGGCGATCGCGG
CGATTTCACCCGTCCTCCTCCGCCTCCGCCCTCCAACAAAGGCCTCAAGAAGAAGATCCTGAGATCTCTTCCTAAGTACGCCTTCGCCGCCGAGTTTGCCGCTCGGTTCT
CGGACTGCGCGATCTGTTTGGCGGAGTTCGCCGTCGGCGATGAAATCCGCGTGCTGCCGCAGTGCGGCCATGGATTTCACGTTTCCTGCATCGACAAATGGTTCAAAACT
CACTCCTCCTGTCCTTCGTGCCGCCAGATTCTGGTGGTGAGTCAGTGCCAGAAGTGCGGCGGCGGCGTTTTGCCGGCGAGCTCGAGTTCGAACGGCGGAGGGAGCGAATC
GAGAGTAAAAGAGGAAGGAGAAGATAAGAGGAATAATAGGTTCTTACCTTAACCCTAGGGTTTTTTTTTTAAATTTTATTTTTTTCTCTTTTAAATTAGTGCGATTCTTG
TTCCTTCCGTGTTGTAAATAACTTTGTTTGTTAATCAAAATTAATGTAATTAGTTGGAATTTGATTTGAAATCGTAACCTCAGTTGGAGTTTGAAATTTGTGGTTGATTT
TGAGGCTGTGAATGTAATGAAGGTTGGCATAACTTTAGCAACAAAATTAAAATAAATTAATTAATT
Protein sequenceShow/hide protein sequence
MRPLRFLAGVNSSATSDTGELQRYDSDFVIILAALLCALICVLGLVAVARCAWLRRLAGDRGDFTRPPPPPPSNKGLKKKILRSLPKYAFAAEFAARFSDCAICLAEFAV
GDEIRVLPQCGHGFHVSCIDKWFKTHSSCPSCRQILVVSQCQKCGGGVLPASSSSNGGGSESRVKEEGEDKRNNRFLP