; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005616 (gene) of Chayote v1 genome

Gene IDSed0005616
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase
Genome locationLG10:23412450..23413885
RNA-Seq ExpressionSed0005616
SyntenySed0005616
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046094.1 gag protease polyprotein [Cucumis melo var. makuwa]7.8e-4533.19Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ +F     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR-----EGHR
        + KF+ GLR  +   VRA  P T A A++LA   ++ +      T  R  +  Q                         +    EA  A R     EGH 
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR-----EGHR

Query:  ARHCNLYMV-VAQ------------WLSNEEE----------------EYML-------------------------RLARRLRKPDPQWQYLWLAGEVR
        A  C L +  +AQ            + +N  E                 Y L                          L   L    P  + +    +V+
Subjt:  ARHCNLYMV-VAQ------------WLSNEEE----------------EYML-------------------------RLARRLRKPDPQWQYLWLAGEVR

Query:  DGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSV
          +I+++   ++VTLIVL M  FDVILGMDWLA NHA IDC  KEV F PP   SFKF+G  S   P VISA++A +LL++G WG L  +       +S+
Subjt:  DGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSV

Query:  GSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK
         S    R     F EEL      REV+F+IELEP T PIS+APYRMAP   K
Subjt:  GSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK

KAA0048442.1 pol protein [Cucumis melo var. makuwa]1.2e-4532.12Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSP--PATWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++  +ER  G      TWE FK  F AKF +   +   ++ F NL+QG   +E Y+ +F     FAP +I     +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSP--PATWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA-------------------------------------TIYDGKRPQCTRVRSVSLTQEVMDMEAVSAV-
          KF+ GLR  +   VRA  P T A A+++A                                     T+  G   Q  R    +  + + ++ A +   
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA-------------------------------------TIYDGKRPQCTRVRSVSLTQEVMDMEAVSAV-

Query:  ------------------REGHRARHC------------------NLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQV
                          + GH A  C                   ++    Q            L   L    P  + LW   +++  R++++++ L V
Subjt:  ------------------REGHRARHC------------------NLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQV

Query:  TLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCF
        TL+VL M  FDVILGMDWL+ NHA IDC  KEVVF PP   SFKFRG      P VISA+KA +LL++G WG LA +       +S+ S    R     F
Subjt:  TLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCF

Query:  SEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK
         +EL      REVDF+IELEP T PIS+APYRMAP   K
Subjt:  SEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]2.3e-4433.11Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ +F     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR---------
          KF+ GLR  +   VRA  P T A A++LA   ++ +      T  R ++  Q                         +    EA  A R         
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR---------

Query:  -------------------EGHRARHCNLYMV-VAQ------------WLSNEEE----------------EYMLRLARRLRKPDPQWQYLWLAGEVRDG
                           EGH A  C L +   AQ            + +N+ E                 Y L L   +    P  + +    +V+  
Subjt:  -------------------EGHRARHCNLYMV-VAQ------------WLSNEEE----------------EYMLRLARRLRKPDPQWQYLWLAGEVRDG

Query:  RIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGS
        +I+++   ++VTL+VL M  FDVILGMDWLA +HA IDC  KEV F PP R SFKF+G  S   P VISA++A +LL++G WG LA +       +S+ S
Subjt:  RIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGS

Query:  AHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK
            R     F EEL      REV+F+IELEP T PIS+APYRMAP   K
Subjt:  AHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK

KAA0052126.1 pol protein [Cucumis melo var. makuwa]2.2e-4733.66Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ +F     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLAT-----------------------------------------------IYDGKRPQCTRVRSVSL-TQE
          KF+ GLR  +   VRA  P T A A++LA                                                ++   + +  RV +V + T  
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLAT-----------------------------------------------IYDGKRPQCTRVRSVSL-TQE

Query:  VMDMEAVSAVREGHRARHCNLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMI
        V+   A+     G      +   V+   L  E    +L ++       P  + +    +V+  +I+++   ++VTL+VL M  FDVILGMDWLA  HA I
Subjt:  VMDMEAVSAVREGHRARHCNLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMI

Query:  DCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPI
        DC CKEV F PP   SFKF+G  S   P VIS ++A +LL++G WG LA +       +S+ S    R     F EEL      REV+F+IELEP T PI
Subjt:  DCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPI

Query:  SKAPYRMAPQNRK
        S+APYRMAP   K
Subjt:  SKAPYRMAPQNRK

KAA0062258.1 gag protease polyprotein [Cucumis melo var. makuwa]1.6e-4534.91Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ KF     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVR-SVSLTQEVMDMEAVSAVREGHR-ARHCNLYMV-VAQ------------WLS
          KF+  LR  +   VRA  P T A A++LA   ++ +      T  R S S  +   + + V   +   R A  C L +   AQ            + +
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVR-SVSLTQEVMDMEAVSAVREGHR-ARHCNLYMV-VAQ------------WLS

Query:  NEEE----------------------------------EYMLR-------LARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILG
        N+ E                                   +ML        L   L    P  + +    +V+  +I+++   ++VTL+VL M  FDVILG
Subjt:  NEEE----------------------------------EYMLR-------LARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILG

Query:  MDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDF
        MDWLA NHA IDC  KEV F PP   SFKF+G  S   P VISA+KA +LL++G WG LA +       +S+ S    R     F EEL      REV+F
Subjt:  MDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDF

Query:  SIELEPRTRPISKAPYRMAPQNRK
        +IELEPRT PIS+APYRMAP   K
Subjt:  SIELEPRTRPISKAPYRMAPQNRK

TrEMBL top hitse value%identityAlignment
A0A5A7TSQ8 Reverse transcriptase3.8e-4533.19Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ +F     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR-----EGHR
        + KF+ GLR  +   VRA  P T A A++LA   ++ +      T  R  +  Q                         +    EA  A R     EGH 
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR-----EGHR

Query:  ARHCNLYMV-VAQ------------WLSNEEE----------------EYML-------------------------RLARRLRKPDPQWQYLWLAGEVR
        A  C L +  +AQ            + +N  E                 Y L                          L   L    P  + +    +V+
Subjt:  ARHCNLYMV-VAQ------------WLSNEEE----------------EYML-------------------------RLARRLRKPDPQWQYLWLAGEVR

Query:  DGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSV
          +I+++   ++VTLIVL M  FDVILGMDWLA NHA IDC  KEV F PP   SFKF+G  S   P VISA++A +LL++G WG L  +       +S+
Subjt:  DGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSV

Query:  GSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK
         S    R     F EEL      REV+F+IELEP T PIS+APYRMAP   K
Subjt:  GSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK

A0A5A7TY28 Reverse transcriptase5.8e-4632.12Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSP--PATWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++  +ER  G      TWE FK  F AKF +   +   ++ F NL+QG   +E Y+ +F     FAP +I     +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSP--PATWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA-------------------------------------TIYDGKRPQCTRVRSVSLTQEVMDMEAVSAV-
          KF+ GLR  +   VRA  P T A A+++A                                     T+  G   Q  R    +  + + ++ A +   
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA-------------------------------------TIYDGKRPQCTRVRSVSLTQEVMDMEAVSAV-

Query:  ------------------REGHRARHC------------------NLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQV
                          + GH A  C                   ++    Q            L   L    P  + LW   +++  R++++++ L V
Subjt:  ------------------REGHRARHC------------------NLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQV

Query:  TLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCF
        TL+VL M  FDVILGMDWL+ NHA IDC  KEVVF PP   SFKFRG      P VISA+KA +LL++G WG LA +       +S+ S    R     F
Subjt:  TLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCF

Query:  SEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK
         +EL      REVDF+IELEP T PIS+APYRMAP   K
Subjt:  SEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK

A0A5A7U330 Reverse transcriptase1.1e-4433.11Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ +F     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR---------
          KF+ GLR  +   VRA  P T A A++LA   ++ +      T  R ++  Q                         +    EA  A R         
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVRSVSLTQ-------------------------EVMDMEAVSAVR---------

Query:  -------------------EGHRARHCNLYMV-VAQ------------WLSNEEE----------------EYMLRLARRLRKPDPQWQYLWLAGEVRDG
                           EGH A  C L +   AQ            + +N+ E                 Y L L   +    P  + +    +V+  
Subjt:  -------------------EGHRARHCNLYMV-VAQ------------WLSNEEE----------------EYMLRLARRLRKPDPQWQYLWLAGEVRDG

Query:  RIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGS
        +I+++   ++VTL+VL M  FDVILGMDWLA +HA IDC  KEV F PP R SFKF+G  S   P VISA++A +LL++G WG LA +       +S+ S
Subjt:  RIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGS

Query:  AHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK
            R     F EEL      REV+F+IELEP T PIS+APYRMAP   K
Subjt:  AHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPISKAPYRMAPQNRK

A0A5A7UD41 Reverse transcriptase1.1e-4733.66Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ +F     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLAT-----------------------------------------------IYDGKRPQCTRVRSVSL-TQE
          KF+ GLR  +   VRA  P T A A++LA                                                ++   + +  RV +V + T  
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLAT-----------------------------------------------IYDGKRPQCTRVRSVSL-TQE

Query:  VMDMEAVSAVREGHRARHCNLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMI
        V+   A+     G      +   V+   L  E    +L ++       P  + +    +V+  +I+++   ++VTL+VL M  FDVILGMDWLA  HA I
Subjt:  VMDMEAVSAVREGHRARHCNLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILGMDWLADNHAMI

Query:  DCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPI
        DC CKEV F PP   SFKF+G  S   P VIS ++A +LL++G WG LA +       +S+ S    R     F EEL      REV+F+IELEP T PI
Subjt:  DCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDFSIELEPRTRPI

Query:  SKAPYRMAPQNRK
        S+APYRMAP   K
Subjt:  SKAPYRMAPQNRK

A0A5A7V3S4 Gag protease polyprotein7.6e-4634.91Show/hide
Query:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK
        M CPE Q+ +CA   L      WW++T  ER  G   +  TW+ FK  F AKF +   ++   + F NL+QG   +E Y+ KF     FAP++IAT   +
Subjt:  MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPA--TWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELK

Query:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVR-SVSLTQEVMDMEAVSAVREGHR-ARHCNLYMV-VAQ------------WLS
          KF+  LR  +   VRA  P T A A++LA   ++ +      T  R S S  +   + + V   +   R A  C L +   AQ            + +
Subjt:  IRKFIAGLRQGVSQDVRAQAPETFAKAVQLA---TIYDGKRPQCTRVR-SVSLTQEVMDMEAVSAVREGHR-ARHCNLYMV-VAQ------------WLS

Query:  NEEE----------------------------------EYMLR-------LARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILG
        N+ E                                   +ML        L   L    P  + +    +V+  +I+++   ++VTL+VL M  FDVILG
Subjt:  NEEE----------------------------------EYMLR-------LARRLRKPDPQWQYLWLAGEVRDGRIQVSDQTLQVTLIVLAMSGFDVILG

Query:  MDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDF
        MDWLA NHA IDC  KEV F PP   SFKF+G  S   P VISA+KA +LL++G WG LA +       +S+ S    R     F EEL      REV+F
Subjt:  MDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSAR-VCGCFSEELHAC-AEREVDF

Query:  SIELEPRTRPISKAPYRMAPQNRK
        +IELEPRT PIS+APYRMAP   K
Subjt:  SIELEPRTRPISKAPYRMAPQNRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCCTGAGGTGCAGCGAGCTCGATGTGCAGCTCATGCGTTAGCTGGAACAGCTAAGTGGTGGTGGGATTCCACCTTGAGTGAGAGACCGGCTGGGTCTCCCCC
TGCCACCTGGGAATTCTTCAAGGCTGAGTTCAAGGCAAAATTTATCAATGAAGAAGCCCAAGAAAAGATGATTGAGCTGTTTTCGAACCTTAAGCAGGGGTCTGACCCAA
TCGAGGTGTATGAGAGGAAGTTTTCGGAGTATGGGTACTTCGCACCGCAGTTGATTGCTACTCCTGAGCTGAAGATCAGGAAGTTTATTGCGGGTCTGAGGCAGGGAGTG
TCTCAGGATGTTAGGGCACAGGCCCCAGAGACTTTTGCCAAGGCAGTGCAGTTGGCAACTATTTATGATGGAAAAAGGCCCCAGTGTACTCGGGTCAGAAGCGTAAGTTT
GACGCAGGAGGTAATGGACATGGAGGCGGTCAGCGCCGTCAGGGAGGGGCATCGGGCCCGGCATTGCAACCTGTATATGGTGGTGGCACAGTGGCTCAGCAATGAGGAGG
AAGAGTATATGCTACGACTCGCCAGGAGGCTGAGAAAGCCGGACCCGCAGTGGCAGTATCTTTGGCTAGCTGGAGAGGTAAGGGATGGTCGGATACAGGTGTCCGACCAG
ACTCTGCAGGTTACCCTCATAGTGTTAGCTATGAGCGGTTTTGATGTGATCCTCGGCATGGATTGGTTAGCTGATAACCACGCTATGATTGACTGTCGTTGTAAGGAGGT
GGTGTTCAGGCCGCCAGGTAGGCCTAGCTTTAAATTTCGGGGCACCCAGAGTGGGGTGTGTCCGCCGGTGATTTCGGCAGTTAAAGCTCACCGTTTGTTAGCTCGAGGAG
CTTGGGGTTTCTTAGCTAAGTTGACCGGCGAGAACCGTGACCGATTATCTGTCGGCAGTGCCCATAGTGCTAGAGTTTGCGGATGTTTTTCTGAAGAGTTGCACGCCTGC
GCCGAGAGAGAGGTGGATTTCTCAATAGAGCTTGAGCCGAGGACTCGCCCTATCTCGAAAGCTCCTTATCGTATGGCGCCGCAGAATCGAAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTCCTGAGGTGCAGCGAGCTCGATGTGCAGCTCATGCGTTAGCTGGAACAGCTAAGTGGTGGTGGGATTCCACCTTGAGTGAGAGACCGGCTGGGTCTCCCCC
TGCCACCTGGGAATTCTTCAAGGCTGAGTTCAAGGCAAAATTTATCAATGAAGAAGCCCAAGAAAAGATGATTGAGCTGTTTTCGAACCTTAAGCAGGGGTCTGACCCAA
TCGAGGTGTATGAGAGGAAGTTTTCGGAGTATGGGTACTTCGCACCGCAGTTGATTGCTACTCCTGAGCTGAAGATCAGGAAGTTTATTGCGGGTCTGAGGCAGGGAGTG
TCTCAGGATGTTAGGGCACAGGCCCCAGAGACTTTTGCCAAGGCAGTGCAGTTGGCAACTATTTATGATGGAAAAAGGCCCCAGTGTACTCGGGTCAGAAGCGTAAGTTT
GACGCAGGAGGTAATGGACATGGAGGCGGTCAGCGCCGTCAGGGAGGGGCATCGGGCCCGGCATTGCAACCTGTATATGGTGGTGGCACAGTGGCTCAGCAATGAGGAGG
AAGAGTATATGCTACGACTCGCCAGGAGGCTGAGAAAGCCGGACCCGCAGTGGCAGTATCTTTGGCTAGCTGGAGAGGTAAGGGATGGTCGGATACAGGTGTCCGACCAG
ACTCTGCAGGTTACCCTCATAGTGTTAGCTATGAGCGGTTTTGATGTGATCCTCGGCATGGATTGGTTAGCTGATAACCACGCTATGATTGACTGTCGTTGTAAGGAGGT
GGTGTTCAGGCCGCCAGGTAGGCCTAGCTTTAAATTTCGGGGCACCCAGAGTGGGGTGTGTCCGCCGGTGATTTCGGCAGTTAAAGCTCACCGTTTGTTAGCTCGAGGAG
CTTGGGGTTTCTTAGCTAAGTTGACCGGCGAGAACCGTGACCGATTATCTGTCGGCAGTGCCCATAGTGCTAGAGTTTGCGGATGTTTTTCTGAAGAGTTGCACGCCTGC
GCCGAGAGAGAGGTGGATTTCTCAATAGAGCTTGAGCCGAGGACTCGCCCTATCTCGAAAGCTCCTTATCGTATGGCGCCGCAGAATCGAAAGAGTTAA
Protein sequenceShow/hide protein sequence
MACPEVQRARCAAHALAGTAKWWWDSTLSERPAGSPPATWEFFKAEFKAKFINEEAQEKMIELFSNLKQGSDPIEVYERKFSEYGYFAPQLIATPELKIRKFIAGLRQGV
SQDVRAQAPETFAKAVQLATIYDGKRPQCTRVRSVSLTQEVMDMEAVSAVREGHRARHCNLYMVVAQWLSNEEEEYMLRLARRLRKPDPQWQYLWLAGEVRDGRIQVSDQ
TLQVTLIVLAMSGFDVILGMDWLADNHAMIDCRCKEVVFRPPGRPSFKFRGTQSGVCPPVISAVKAHRLLARGAWGFLAKLTGENRDRLSVGSAHSARVCGCFSEELHAC
AEREVDFSIELEPRTRPISKAPYRMAPQNRKS