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Sed0005618 (gene) of Chayote v1 genome

Gene IDSed0005618
OrganismSechium edule (Chayote v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationLG05:30405379..30405693
RNA-Seq ExpressionSed0005618
SyntenySed0005618
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608191.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3971.19Show/hide
Query:  MSGVWVFRSNGVMRLVE--------------KGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSI
        MSGVWVFRSNGVMRLVE                GGG RK +L+H+ SGQ VCSYG LEKILEGLGWERYYEGDPD  QFHK SSIDLISLP+ FS FNS+
Subjt:  MSGVWVFRSNGVMRLVE--------------KGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSI

Query:  HMYDLVVKNPNVFHVTQP
        +MYDLVVKNPNVFHV +P
Subjt:  HMYDLVVKNPNVFHVTQP

XP_004136318.1 flowering-promoting factor 1-like protein 2 [Cucumis sativus]2.8e-4069.11Show/hide
Query:  MSGVWVFRSNGVMRLVEK-------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFS
        MSGVWVFRSNGVMRLVE                    GGGG RK +L+H+ SGQ VCSYG L+KILEGLGWERYYEGDPDF QFHKRSSIDLISLP+ FS
Subjt:  MSGVWVFRSNGVMRLVEK-------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFS

Query:  NFNSIHMYDLVVKNPNVFHVTQP
         FNSI+M+DLV+KNPNVFHV +P
Subjt:  NFNSIHMYDLVVKNPNVFHVTQP

XP_008466327.1 PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo]3.7e-4067.44Show/hide
Query:  MSGVWVFRSNGVMRLVEK-------------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVE                          GGGG RK +L+H+ SGQ VCSYG L+KILEGLGWERYYEGDPDF QFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVEK-------------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLIS

Query:  LPIHFSNFNSIHMYDLVVKNPNVFHVTQP
        LP+ FS FNSI+MYDLVVKNPNVFHV +P
Subjt:  LPIHFSNFNSIHMYDLVVKNPNVFHVTQP

XP_022940479.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]1.4e-3971.19Show/hide
Query:  MSGVWVFRSNGVMRLVE--------------KGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSI
        MSGVWVFRSNGVMRLVE                GGG RK +L+H+ SGQ VCSYG LEKILEGLGWERYYEGDPD  QFHK SSIDLISLP+ FS FNS+
Subjt:  MSGVWVFRSNGVMRLVE--------------KGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSI

Query:  HMYDLVVKNPNVFHVTQP
        +MYDLVVKNPNVFHV +P
Subjt:  HMYDLVVKNPNVFHVTQP

XP_022982497.1 flowering-promoting factor 1-like protein 2 [Cucurbita maxima]3.7e-4069.35Show/hide
Query:  MSGVWVFRSNGVMRLVEK--------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHF
        MSGVWVFRSNGVMRLVE                     GGGG RK +L+H+ SGQ VCSYG LEKILEGLGWERYYEGDPDF QFHK SSIDLISLP+ F
Subjt:  MSGVWVFRSNGVMRLVEK--------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHF

Query:  SNFNSIHMYDLVVKNPNVFHVTQP
        S FNS++MYDLVVKNPNVFHV +P
Subjt:  SNFNSIHMYDLVVKNPNVFHVTQP

TrEMBL top hitse value%identityAlignment
A0A0A0LHE6 Uncharacterized protein1.4e-4069.11Show/hide
Query:  MSGVWVFRSNGVMRLVEK-------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFS
        MSGVWVFRSNGVMRLVE                    GGGG RK +L+H+ SGQ VCSYG L+KILEGLGWERYYEGDPDF QFHKRSSIDLISLP+ FS
Subjt:  MSGVWVFRSNGVMRLVEK-------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFS

Query:  NFNSIHMYDLVVKNPNVFHVTQP
         FNSI+M+DLV+KNPNVFHV +P
Subjt:  NFNSIHMYDLVVKNPNVFHVTQP

A0A1S3CSB1 flowering-promoting factor 1-like protein 21.8e-4067.44Show/hide
Query:  MSGVWVFRSNGVMRLVEK-------------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVE                          GGGG RK +L+H+ SGQ VCSYG L+KILEGLGWERYYEGDPDF QFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVEK-------------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLIS

Query:  LPIHFSNFNSIHMYDLVVKNPNVFHVTQP
        LP+ FS FNSI+MYDLVVKNPNVFHV +P
Subjt:  LPIHFSNFNSIHMYDLVVKNPNVFHVTQP

A0A5A7UF14 Flowering-promoting factor 1-like protein 21.8e-4067.44Show/hide
Query:  MSGVWVFRSNGVMRLVEK-------------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVE                          GGGG RK +L+H+ SGQ VCSYG L+KILEGLGWERYYEGDPDF QFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVEK-------------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLIS

Query:  LPIHFSNFNSIHMYDLVVKNPNVFHVTQP
        LP+ FS FNSI+MYDLVVKNPNVFHV +P
Subjt:  LPIHFSNFNSIHMYDLVVKNPNVFHVTQP

A0A6J1FKC3 flowering-promoting factor 1-like protein 26.8e-4071.19Show/hide
Query:  MSGVWVFRSNGVMRLVE--------------KGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSI
        MSGVWVFRSNGVMRLVE                GGG RK +L+H+ SGQ VCSYG LEKILEGLGWERYYEGDPD  QFHK SSIDLISLP+ FS FNS+
Subjt:  MSGVWVFRSNGVMRLVE--------------KGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSI

Query:  HMYDLVVKNPNVFHVTQP
        +MYDLVVKNPNVFHV +P
Subjt:  HMYDLVVKNPNVFHVTQP

A0A6J1IWR8 flowering-promoting factor 1-like protein 21.8e-4069.35Show/hide
Query:  MSGVWVFRSNGVMRLVEK--------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHF
        MSGVWVFRSNGVMRLVE                     GGGG RK +L+H+ SGQ VCSYG LEKILEGLGWERYYEGDPDF QFHK SSIDLISLP+ F
Subjt:  MSGVWVFRSNGVMRLVEK--------------------GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHF

Query:  SNFNSIHMYDLVVKNPNVFHVTQP
        S FNS++MYDLVVKNPNVFHV +P
Subjt:  SNFNSIHMYDLVVKNPNVFHVTQP

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 17.5e-2857.94Show/hide
Query:  MSGVWVFRSNGVMRLVEKGGGG-----RRKTLLIHVASGQAVCSYGILEKILEGLGWERYY-EGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVK
        MSGVWVF+ NGV+RLVE           R+ +++++ +G+ V SY  LE+IL+ LGWERY+  GD D +QFHKRSSIDLISLP  F+ FNS++MYD+VVK
Subjt:  MSGVWVFRSNGVMRLVEKGGGG-----RRKTLLIHVASGQAVCSYGILEKILEGLGWERYY-EGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVK

Query:  NPNVFHV
        NPN FHV
Subjt:  NPNVFHV

O24340 Flowering-promoting factor 11.3e-2757.01Show/hide
Query:  MSGVWVFRSNGVMRLVEK-----GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYY-EGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVK
        MSGVWVF+ NGV+RLVE      G    R+ +++++ +G+ + SY  LE+IL  LGWERY+  GD D +QFHKRSSIDLISLP  F+ F+S++MYD+VVK
Subjt:  MSGVWVFRSNGVMRLVEK-----GGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYY-EGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVK

Query:  NPNVFHV
        NPN FHV
Subjt:  NPNVFHV

Q5Q0B3 Flowering-promoting factor 1-like protein 11.5e-3159.5Show/hide
Query:  MSGVWVFRSNGVMRLVE--------------KGGGGR----RKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGD--PDFIQFHKRSSIDLISLPIHF
        MSGVWVF  NGVMRLVE                GG +    R+ +L+H+ S + V SYG LEKIL+ LGWERYY GD     +QFHKR+SIDLISLP  F
Subjt:  MSGVWVFRSNGVMRLVE--------------KGGGGR----RKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGD--PDFIQFHKRSSIDLISLPIHF

Query:  SNFNSIHMYDLVVKNPNVFHV
        S FNSIHMYD+VVKNPNVFHV
Subjt:  SNFNSIHMYDLVVKNPNVFHV

Q9LGE3 Flowering-promoting factor 1-like protein 14.9e-2761.47Show/hide
Query:  MSGVWVFRSNGVMRLVEKG--------GGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLV
        MSGVWVF+ NGV+RLVEK          GGRRK  L+H  SGQ V SY  LE  L  LGWERYYE DP   QFHKR S+DLISLP  FS F+S+HMYD+V
Subjt:  MSGVWVFRSNGVMRLVEKG--------GGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLV

Query:  VKNPNVFHV
        VKN + F V
Subjt:  VKNPNVFHV

Q9LXB5 Flowering-promoting factor 1-like protein 26.2e-3061.47Show/hide
Query:  MSGVWVFRSNGVMRLVE---KGGG-----GRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLV
        MSGVWVF +NGV+RLVE   + GG       R+ +L+++ +G+AV SY  LE+IL  LGWERY+ GD D IQ+HKRSSIDLISLP  FS FNS++MYD+V
Subjt:  MSGVWVFRSNGVMRLVE---KGGG-----GRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLV

Query:  VKNPNVFHV
        VKNPN FHV
Subjt:  VKNPNVFHV

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.0e-3259.5Show/hide
Query:  MSGVWVFRSNGVMRLVE--------------KGGGGR----RKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGD--PDFIQFHKRSSIDLISLPIHF
        MSGVWVF  NGVMRLVE                GG +    R+ +L+H+ S + V SYG LEKIL+ LGWERYY GD     +QFHKR+SIDLISLP  F
Subjt:  MSGVWVFRSNGVMRLVE--------------KGGGGR----RKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGD--PDFIQFHKRSSIDLISLPIHF

Query:  SNFNSIHMYDLVVKNPNVFHV
        S FNSIHMYD+VVKNPNVFHV
Subjt:  SNFNSIHMYDLVVKNPNVFHV

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)4.4e-3161.47Show/hide
Query:  MSGVWVFRSNGVMRLVE---KGGG-----GRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLV
        MSGVWVF +NGV+RLVE   + GG       R+ +L+++ +G+AV SY  LE+IL  LGWERY+ GD D IQ+HKRSSIDLISLP  FS FNS++MYD+V
Subjt:  MSGVWVFRSNGVMRLVE---KGGG-----GRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLV

Query:  VKNPNVFHV
        VKNPN FHV
Subjt:  VKNPNVFHV

AT5G24860.1 flowering promoting factor 15.3e-2957.94Show/hide
Query:  MSGVWVFRSNGVMRLVEKGGGG-----RRKTLLIHVASGQAVCSYGILEKILEGLGWERYY-EGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVK
        MSGVWVF+ NGV+RLVE           R+ +++++ +G+ V SY  LE+IL+ LGWERY+  GD D +QFHKRSSIDLISLP  F+ FNS++MYD+VVK
Subjt:  MSGVWVFRSNGVMRLVEKGGGG-----RRKTLLIHVASGQAVCSYGILEKILEGLGWERYY-EGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVK

Query:  NPNVFHV
        NPN FHV
Subjt:  NPNVFHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCGTGTGGGTGTTCCGATCGAACGGGGTGATGCGGCTGGTGGAGAAGGGCGGCGGCGGAAGAAGGAAGACGCTGCTGATCCACGTCGCGTCGGGGCAGGCGGT
GTGTTCGTACGGAATTCTGGAGAAGATTCTGGAAGGGTTGGGGTGGGAGAGATACTACGAAGGGGATCCAGATTTCATCCAATTCCACAAGCGCTCTTCCATCGATCTCA
TTTCCCTCCCCATCCACTTTTCCAACTTCAATTCCATCCATATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTCACTCAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCGTGTGGGTGTTCCGATCGAACGGGGTGATGCGGCTGGTGGAGAAGGGCGGCGGCGGAAGAAGGAAGACGCTGCTGATCCACGTCGCGTCGGGGCAGGCGGT
GTGTTCGTACGGAATTCTGGAGAAGATTCTGGAAGGGTTGGGGTGGGAGAGATACTACGAAGGGGATCCAGATTTCATCCAATTCCACAAGCGCTCTTCCATCGATCTCA
TTTCCCTCCCCATCCACTTTTCCAACTTCAATTCCATCCATATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTCACTCAACCATAA
Protein sequenceShow/hide protein sequence
MSGVWVFRSNGVMRLVEKGGGGRRKTLLIHVASGQAVCSYGILEKILEGLGWERYYEGDPDFIQFHKRSSIDLISLPIHFSNFNSIHMYDLVVKNPNVFHVTQP