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Sed0005622 (gene) of Chayote v1 genome

Gene IDSed0005622
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF3049)
Genome locationLG03:5236928..5238365
RNA-Seq ExpressionSed0005622
SyntenySed0005622
Gene Ontology termsNA
InterPro domainsIPR021410 - The fantastic four family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016540.1 hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-3153.37Show/hide
Query:  MESCVDLREN----------HHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL
        +ESCVDL++N            PE   S KRD K   + R+ ++ YPPPIPLLVR+ N   SHIPWV+KR+YTGDGRLILTEE+VK HEFF AHRS+GRL
Subjt:  MESCVDLREN----------HHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL

Query:  ILQLVVSD--ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT
        +LQLV  D  E +ED    E+ +     G    GG   KY +V  RD AFMFGV V AG+LR+
Subjt:  ILQLVVSD--ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT

XP_022141391.1 uncharacterized protein LOC111011804, partial [Momordica charantia]9.4e-3257.56Show/hide
Query:  MESCVDLRENH--------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLIL
        MESCVDL+EN          P  + S KR+ KMW    R EREYPPPIPLLVR+ N   SH+PWVLKR YTGDGRLILTEE+V+ HE+F AHRS+GRL+L
Subjt:  MESCVDLRENH--------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLIL

Query:  QLVVSD----ESNEDQCAAEEVDVGVGVGVGVSGGM-CYKYGSV-GGRDPAFMFGVAVP---AGNLRTAVRS
        QLV  D    ES +DQ   E+ D     G    G M C K G V   RDPA MFGVAVP   AG LRT VRS
Subjt:  QLVVSD----ESNEDQCAAEEVDVGVGVGVGVSGGM-CYKYGSV-GGRDPAFMFGVAVP---AGNLRTAVRS

XP_022939970.1 uncharacterized protein LOC111445672 [Cucurbita moschata]7.2e-3253.99Show/hide
Query:  MESCVDLREN----------HHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL
        +ESCVDL++N            PE   S KRD K   +GR+ ++ YPPPIPLLVR+ N   SHIPWV+KR+YTGDGRLILTEE+VK HEFF AHRS+GRL
Subjt:  MESCVDLREN----------HHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL

Query:  ILQLVVSD--ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT
        +LQLV  D  E +ED    E+ +     G    GG   KY +V  RD AFMFGV V AG+LR+
Subjt:  ILQLVVSD--ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT

XP_022992861.1 uncharacterized protein LOC111489066 [Cucurbita maxima]1.2e-3153.01Show/hide
Query:  MESCVDLRENH----------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL
        +ESCVDL+ +H           PE   S KRD K   +GR+ ++ YPPPIPLLVR+ N   SHIPWV+KR+YTGDGRLILTEE+VK HEFF AHRS+GRL
Subjt:  MESCVDLRENH----------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL

Query:  ILQLVVS-----DESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT
        +LQLV       DE  +++   EE +     G G  GG   KY +V  RD AFMFGV V AG+LR+
Subjt:  ILQLVVS-----DESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT

XP_023551237.1 uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]6.5e-3354.04Show/hide
Query:  MESCVDLRENHHPEPRTSP----------KRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL
        +ESCVDL++ H     T+P          KRD K   +GR+ ++ YPPPIPLLVR+ N   SHIPWV+KR+YTGDGRLILTEE+VK HEFF AHRS+GRL
Subjt:  MESCVDLRENHHPEPRTSP----------KRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL

Query:  ILQLVVSDESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT
        +LQLV  D+ + D+   EEV+       G  GG   KY +V  RD AFMFGV V AG+LR+
Subjt:  ILQLVVSDESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT

TrEMBL top hitse value%identityAlignment
A0A6J1CJ12 uncharacterized protein LOC1110118044.6e-3257.56Show/hide
Query:  MESCVDLRENH--------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLIL
        MESCVDL+EN          P  + S KR+ KMW    R EREYPPPIPLLVR+ N   SH+PWVLKR YTGDGRLILTEE+V+ HE+F AHRS+GRL+L
Subjt:  MESCVDLRENH--------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLIL

Query:  QLVVSD----ESNEDQCAAEEVDVGVGVGVGVSGGM-CYKYGSV-GGRDPAFMFGVAVP---AGNLRTAVRS
        QLV  D    ES +DQ   E+ D     G    G M C K G V   RDPA MFGVAVP   AG LRT VRS
Subjt:  QLVVSD----ESNEDQCAAEEVDVGVGVGVGVSGGM-CYKYGSV-GGRDPAFMFGVAVP---AGNLRTAVRS

A0A6J1FP95 uncharacterized protein LOC1114456723.5e-3253.99Show/hide
Query:  MESCVDLREN----------HHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL
        +ESCVDL++N            PE   S KRD K   +GR+ ++ YPPPIPLLVR+ N   SHIPWV+KR+YTGDGRLILTEE+VK HEFF AHRS+GRL
Subjt:  MESCVDLREN----------HHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL

Query:  ILQLVVSD--ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT
        +LQLV  D  E +ED    E+ +     G    GG   KY +V  RD AFMFGV V AG+LR+
Subjt:  ILQLVVSD--ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT

A0A6J1GVY4 uncharacterized protein LOC1114580311.6e-2449.69Show/hide
Query:  MESCVDLRENHHPEPRTSP--KRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSD
        +ESCVDL ENH     +    +RD KMW + R+   EYPPPI LLVR+ N   S +PWVLKR YT DGRLILTEER++ +EFF AHRSNGRL+LQLV  D
Subjt:  MESCVDLRENHHPEPRTSP--KRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSD

Query:  ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFM----FGVAVPAGNLRTAVRS
        +   D     E +V +G   G  G  C    +  GRD         G   P G LRT VRS
Subjt:  ESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFM----FGVAVPAGNLRTAVRS

A0A6J1JTI2 uncharacterized protein LOC1114873727.8e-2456.3Show/hide
Query:  MESCVDLRENHHPEPRTSP--KRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSD
        MESCVDLRENH     +    KRD KM  + R+   EYPPPI LLVR+ N   S +PWVLKRRYT DGRLILT+ER++ +EFF AHRS+GRL+LQLV  D
Subjt:  MESCVDLRENHHPEPRTSP--KRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSD

Query:  ESNEDQCAAEEVDVGVGVG
        +   D+   E  D   G G
Subjt:  ESNEDQCAAEEVDVGVGVG

A0A6J1JUP6 uncharacterized protein LOC1114890666.0e-3253.01Show/hide
Query:  MESCVDLRENH----------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL
        +ESCVDL+ +H           PE   S KRD K   +GR+ ++ YPPPIPLLVR+ N   SHIPWV+KR+YTGDGRLILTEE+VK HEFF AHRS+GRL
Subjt:  MESCVDLRENH----------HPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRL

Query:  ILQLVVS-----DESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT
        +LQLV       DE  +++   EE +     G G  GG   KY +V  RD AFMFGV V AG+LR+
Subjt:  ILQLVVS-----DESNEDQCAAEEVDVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22110.1 structural constituent of ribosome1.2e-1646.36Show/hide
Query:  ESCVDL----RENHHPEPRTSPKRDRKMWRLGRRVE--------REYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGR
        ESC D+      N      + P + R  +   RR E        RE+PPPIPLL ++ N    H+PWVLKR  T DGRLIL EE+V+ HE+F A+RSNGR
Subjt:  ESCVDL----RENHHPEPRTSPKRDRKMWRLGRRVE--------REYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGR

Query:  LILQLVVSDE
        L L LV  D+
Subjt:  LILQLVVSDE

AT1G77932.1 Protein of unknown function (DUF3049)2.1e-1364.71Show/hide
Query:  SHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSDESNE
        SH+P VLKR YT DGRL+L EE+V R+E+F AHRSNGRL++QLV  DE ++
Subjt:  SHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSDESNE

AT5G22390.1 Protein of unknown function (DUF3049)3.6e-0530.12Show/hide
Query:  DRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSDESNEDQ
        D + W   R+  +EYPP +  +                + Y  +GRL+L E R+ R EF  A R +GRL L+LV  ++ ++++
Subjt:  DRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSDESNEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTTGTGTTGATTTAAGGGAGAATCATCATCCGGAACCGCGCACGAGTCCGAAAAGGGATAGGAAAATGTGGAGATTAGGGAGGAGAGTCGAGAGAGAGTATCC
GCCACCGATTCCGTTGCTGGTTCGATCGGCGAATCCGGATAACTCCCACATTCCATGGGTGTTGAAACGGCGCTACACCGGCGACGGGCGGCTGATTCTCACGGAGGAGA
GAGTGAAGCGCCATGAGTTCTTCCTTGCCCATAGATCCAACGGTCGCCTCATTCTGCAGCTCGTGGTCTCCGACGAGTCGAATGAGGATCAATGCGCGGCAGAGGAGGTC
GATGTCGGCGTTGGTGTTGGCGTCGGGGTCAGCGGGGGAATGTGTTATAAGTATGGGAGTGTGGGAGGCAGAGATCCAGCGTTTATGTTCGGAGTGGCAGTCCCTGCAGG
GAACCTGAGGACCGCCGTTCGATCCTAA
mRNA sequenceShow/hide mRNA sequence
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGGATGAGTTTAAGATCAAACGCTATTTCGAAGTTTTCCATTGACGACAACCTTTCATCCTCTACATCATTCATAGCAAGAAG
GTTTCCCCTGTCTTTAGAGATTTCGGCATTGATGATTACATTGGTATGGAGAGTTGTGTTGATTTAAGGGAGAATCATCATCCGGAACCGCGCACGAGTCCGAAAAGGGA
TAGGAAAATGTGGAGATTAGGGAGGAGAGTCGAGAGAGAGTATCCGCCACCGATTCCGTTGCTGGTTCGATCGGCGAATCCGGATAACTCCCACATTCCATGGGTGTTGA
AACGGCGCTACACCGGCGACGGGCGGCTGATTCTCACGGAGGAGAGAGTGAAGCGCCATGAGTTCTTCCTTGCCCATAGATCCAACGGTCGCCTCATTCTGCAGCTCGTG
GTCTCCGACGAGTCGAATGAGGATCAATGCGCGGCAGAGGAGGTCGATGTCGGCGTTGGTGTTGGCGTCGGGGTCAGCGGGGGAATGTGTTATAAGTATGGGAGTGTGGG
AGGCAGAGATCCAGCGTTTATGTTCGGAGTGGCAGTCCCTGCAGGGAACCTGAGGACCGCCGTTCGATCCTAAGGGAAGATGTCGGTGTCACAGTTGTATAGAATAGCAT
TTTGTGTGGCTGTGTAGTTCAATGAATTTAGTTAGTCTGGTTGGGACTTTCGGTTGGGTTTATTTATTATTTTTTTTTTTTACCTTTTTAGTTTCTTGTCGTGGAT
Protein sequenceShow/hide protein sequence
MESCVDLRENHHPEPRTSPKRDRKMWRLGRRVEREYPPPIPLLVRSANPDNSHIPWVLKRRYTGDGRLILTEERVKRHEFFLAHRSNGRLILQLVVSDESNEDQCAAEEV
DVGVGVGVGVSGGMCYKYGSVGGRDPAFMFGVAVPAGNLRTAVRS