; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005638 (gene) of Chayote v1 genome

Gene IDSed0005638
OrganismSechium edule (Chayote v1)
Descriptionphotosystem I reaction center subunit VI, chloroplastic-like
Genome locationLG05:28634389..28636198
RNA-Seq ExpressionSed0005638
SyntenySed0005638
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004928 - Photosystem I PsaH, reaction centre subunit VI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018324.1 Photosystem I reaction center subunit VI, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-7093.75Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AGTKLP+RP+RQSF PK+FKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL Y+SATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

XP_011651500.1 photosystem I reaction center subunit VI, chloroplastic [Cucumis sativus]3.6e-7094.44Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AG KLP+RPSRQ+F PKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL YFSATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

XP_022153665.1 photosystem I reaction center subunit VI, chloroplastic-like [Momordica charantia]6.2e-7093.75Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPV VKGLAGSS AGT+LP++PSRQSF PKNF+AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL YFSATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

XP_022955723.1 photosystem I reaction center subunit VI, chloroplastic-like [Cucurbita moschata]3.6e-7094.44Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AGTKLP+RPSRQSF PK+FKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL Y+SATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

XP_038902740.1 photosystem I reaction center subunit VI, chloroplastic-like [Benincasa hispida]2.8e-7094.44Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AGTKLP+RPSRQS +PKN+KAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL YFSATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

TrEMBL top hitse value%identityAlignment
A0A0A0LAW4 Uncharacterized protein1.8e-7094.44Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AG KLP+RPSRQ+F PKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL YFSATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

A0A6J1DHG2 photosystem I reaction center subunit VI, chloroplastic-like3.0e-7093.75Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPV VKGLAGSS AGT+LP++PSRQSF PKNF+AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL YFSATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

A0A6J1GUS6 photosystem I reaction center subunit VI, chloroplastic-like1.8e-7094.44Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AGTKLP+RPSRQSF PK+FKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL Y+SATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

A0A6J1IVS0 photosystem I reaction center subunit VI, chloroplastic-like1.8e-7094.44Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPVTVKGL GSS AGTKLP+RPSRQSF PK+FKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGGATL Y+SATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

A0A6J1K6V8 photosystem I reaction center subunit VI, chloroplastic-like3.9e-7093.75Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQPV VKGL GSS AGTKLP+RPSRQ+ TPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFLL+GGG+TL YFSATAPDDVLPIKKGPQLPPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

SwissProt top hitse value%identityAlignment
A2Y7D9 Photosystem I reaction center subunit VI, chloroplastic7.2e-5374.13Show/hide
Query:  LATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSF--TPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGL
        +A+L AVQPV VKGLAGSS +G KL +RPS ++   T +  +A AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGL
Subjt:  LATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSF--TPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGL

Query:  LLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLKFLL+GGG+ + Y SA+A  D+LPIKKGPQLPP  GPRGKI
Subjt:  LLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

O04006 Photosystem I reaction center subunit VI, chloroplastic1.3e-5980Show/hide
Query:  MASLATLAAVQPVT-VKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR
        MAS AT+AAVQP + VKGL GSS  G KL I+PSRQSF PK+ +AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR
Subjt:  MASLATLAAVQPVT-VKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR

Query:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        GLLLKFL++GGG+ LTY SA++  DVLPIK+GPQ  PKLGPRGK+
Subjt:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

P22179 Photosystem I reaction center subunit VI, chloroplastic5.8e-6381.94Show/hide
Query:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG
        MASLATLAAVQP T+KGLAGSS AGTKL I+P+RQSF   N ++GA+VAKYGDKSVYFDLED+ NTTGQWD+YGSDAPSPYNSLQSKFFETFAAPFTKRG
Subjt:  MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRG

Query:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        LLLKFL++GGG+ LTY SA AP DVLPI +GPQ PPKLGPRGKI
Subjt:  LLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

Q9SUI6 Photosystem I reaction center subunit VI-2, chloroplastic1.3e-5980Show/hide
Query:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR
        MAS AT+AAVQP   VKGL GSS AG KL I+PSRQSF  K+ +AGAVVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKR
Subjt:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR

Query:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        GLLLKFL++GGG+ LTY SA +  DVLPIK+GPQ PPKLGPRGK+
Subjt:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

Q9SUI7 Photosystem I reaction center subunit VI-1, chloroplastic5.1e-5977.93Show/hide
Query:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR
        MASLAT+AAV+P   +KGL GSS AG KL I+PSR SF PK+ +A  VVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKR
Subjt:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR

Query:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        GLLLKFL++GGG+ LTY SAT+  +VLPIK+GPQ PPKLGPRGK+
Subjt:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

Arabidopsis top hitse value%identityAlignment
AT1G52230.1 photosystem I subunit H29.6e-6180Show/hide
Query:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR
        MAS AT+AAVQP   VKGL GSS AG KL I+PSRQSF  K+ +AGAVVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKR
Subjt:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR

Query:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        GLLLKFL++GGG+ LTY SA +  DVLPIK+GPQ PPKLGPRGK+
Subjt:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI

AT3G16140.1 photosystem I subunit H-13.6e-6077.93Show/hide
Query:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR
        MASLAT+AAV+P   +KGL GSS AG KL I+PSR SF PK+ +A  VVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKR
Subjt:  MASLATLAAVQP-VTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR

Query:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI
        GLLLKFL++GGG+ LTY SAT+  +VLPIK+GPQ PPKLGPRGK+
Subjt:  GLLLKFLLIGGGATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTAGCAACACTAGCCGCCGTTCAGCCGGTCACCGTAAAGGGCCTTGCCGGAAGCTCCTTCGCCGGAACCAAGCTGCCCATCAGGCCCTCTCGCCAGAGCTT
CACACCCAAAAACTTCAAGGCTGGTGCTGTGGTGGCTAAGTATGGTGACAAAAGTGTTTACTTTGATTTGGAGGATTTGGGTAACACTACTGGACAGTGGGATTTGTATG
GCTCTGATGCTCCTTCACCTTACAATTCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGCTAATTGGTGGT
GGTGCCACTCTAACTTATTTCAGTGCTACTGCCCCAGATGATGTTCTTCCAATCAAGAAGGGACCTCAACTTCCACCGAAACTCGGGCCACGTGGCAAGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTAGCAACACTAGCCGCCGTTCAGCCGGTCACCGTAAAGGGCCTTGCCGGAAGCTCCTTCGCCGGAACCAAGCTGCCCATCAGGCCCTCTCGCCAGAGCTT
CACACCCAAAAACTTCAAGGCTGGTGCTGTGGTGGCTAAGTATGGTGACAAAAGTGTTTACTTTGATTTGGAGGATTTGGGTAACACTACTGGACAGTGGGATTTGTATG
GCTCTGATGCTCCTTCACCTTACAATTCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGCTAATTGGTGGT
GGTGCCACTCTAACTTATTTCAGTGCTACTGCCCCAGATGATGTTCTTCCAATCAAGAAGGGACCTCAACTTCCACCGAAACTCGGGCCACGTGGCAAGATCTAA
Protein sequenceShow/hide protein sequence
MASLATLAAVQPVTVKGLAGSSFAGTKLPIRPSRQSFTPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLLIGG
GATLTYFSATAPDDVLPIKKGPQLPPKLGPRGKI