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Sed0005642 (gene) of Chayote v1 genome

Gene IDSed0005642
OrganismSechium edule (Chayote v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationLG05:40050683..40051434
RNA-Seq ExpressionSed0005642
SyntenySed0005642
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]4.5e-0958Show/hide
Query:  QRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        +RC E L  SGC L+DCG+KCWEKHH   +KCI  +  QT YAC+C F+C
Subjt:  QRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]3.1e-1858.02Show/hide
Query:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        M KL S S I+ +AL  AVA+IL  +     +RCQ+ L ++GC L DCGQKCWEKHH  S +CIPTDP QTIYAC+CF++C
Subjt:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]5.2e-2170.97Show/hide
Query:  ALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        AL+LA+++VS AQRCQ++L N+GC LNDCG+KCWEKHH++S +CIPT+P QTIYAC+CFFDC
Subjt:  ALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]7.0e-1861.73Show/hide
Query:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        M KL S S I+ + LI AVA+I +  + + A RCQ+IL NSGC L DCGQKCWEKHH  S +CIPTDP QTIYAC+CF+ C
Subjt:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

XP_018498384.1 PREDICTED: putative defensin-like protein 165 [Pyrus x bretschneideri]1.0e-0848.05Show/hide
Query:  SHSHIILVALIFAVALILAAEEVSGAQ-RCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        S  H IL+ LIF+VAL       + AQ RCQE+L  S C L DCG+KC+ KHH     CI  +P  T YAC+C ++C
Subjt:  SHSHIILVALIFAVALILAAEEVSGAQ-RCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

TrEMBL top hitse value%identityAlignment
A0A0A0KYP7 Uncharacterized protein1.2e-1045.68Show/hide
Query:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        MA L+S   + ++ +IFAV++IL  +  S A +CQ+ L   GC+ ++CGQKC + HH  + KCI TDP  T YAC+CF++C
Subjt:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

A0A0A0L2R3 Uncharacterized protein8.3e-2571.62Show/hide
Query:  SHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        S II  ALIFAVAL+LA+++VS AQRCQ++L N+GC LNDCG+KCWEKHH++S +CIPT+P QTIYAC+CFFDC
Subjt:  SHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

A0A0A0LVZ5 Uncharacterized protein3.4e-1861.73Show/hide
Query:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        M KL S S I+ + LI AVA+I +  + + A RCQ+IL NSGC L DCGQKCWEKHH  S +CIPTDP QTIYAC+CF+ C
Subjt:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

A0A4Y1RT05 Uncharacterized protein2.2e-0958Show/hide
Query:  QRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        +RC E L  SGC L+DCG+KCWEKHH   +KCI  +  QT YAC+C F+C
Subjt:  QRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat1.5e-1858.02Show/hide
Query:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC
        M KL S S I+ +AL  AVA+IL  +     +RCQ+ L ++GC L DCGQKCWEKHH  S +CIPTDP QTIYAC+CF++C
Subjt:  MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACTAAATTCTCATTCCCACATCATTTTGGTTGCTCTTATATTTGCAGTTGCGTTGATTTTGGCTGCTGAAGAAGTTTCAGGTGCCCAAAGATGCCAGGAAAT
ATTGAACAACAGCGGTTGCGTATTGAACGATTGTGGACAGAAATGTTGGGAGAAACATCATTCTATGTCGTTTAAATGCATTCCCACCGATCCTCCCCAAACCATCTATG
CTTGTTTTTGTTTCTTTGATTGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACTAAATTCTCATTCCCACATCATTTTGGTTGCTCTTATATTTGCAGTTGCGTTGATTTTGGCTGCTGAAGAAGTTTCAGGTGCCCAAAGATGCCAGGAAAT
ATTGAACAACAGCGGTTGCGTATTGAACGATTGTGGACAGAAATGTTGGGAGAAACATCATTCTATGTCGTTTAAATGCATTCCCACCGATCCTCCCCAAACCATCTATG
CTTGTTTTTGTTTCTTTGATTGTGCTTAA
Protein sequenceShow/hide protein sequence
MAKLNSHSHIILVALIFAVALILAAEEVSGAQRCQEILNNSGCVLNDCGQKCWEKHHSMSFKCIPTDPPQTIYACFCFFDCA